BLASTX nr result
ID: Mentha23_contig00036045
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha23_contig00036045 (928 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA22288.1| polyprotein [Oryza australiensis] 260 2e-72 ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 256 2e-70 gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 251 7e-70 gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 251 7e-70 gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 251 7e-70 gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 254 1e-69 gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 251 2e-69 gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 251 2e-69 gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 253 3e-69 gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 247 3e-69 gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 246 2e-68 gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 248 3e-68 gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 248 3e-68 emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] 244 9e-67 gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e... 243 9e-67 gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 253 6e-65 gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 253 6e-65 gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Jap... 231 5e-64 gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 250 6e-64 emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 234 2e-63 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 260 bits (665), Expect(2) = 2e-72 Identities = 122/181 (67%), Positives = 149/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L DVYM Sbjct: 863 VAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYM 922 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 QP+GF P +CKLQKSIYGLKQASRSWNI FD+ IK F F++++E+ CVY K G Sbjct: 923 IQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSG 982 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 I+F+++YVDDIL+IGN+I M++SV++ L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 983 SAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 1042 Query: 541 L 543 L Sbjct: 1043 L 1043 Score = 40.4 bits (93), Expect(2) = 2e-72 Identities = 18/39 (46%), Positives = 28/39 (71%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F++ +SKK + M H I L K Sbjct: 1038 KRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSK 1076 >ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria italica] Length = 1686 Score = 256 bits (655), Expect(2) = 2e-70 Identities = 119/181 (65%), Positives = 147/181 (81%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPV +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L DVYM Sbjct: 274 VAKGFRQVQGVDYDETFSPVVMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLAKDVYM 333 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 QPEGF VCKLQ+SIYGLKQASRSWNI FD+ +K FDF +++E+ CVY K G Sbjct: 334 IQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSG 393 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 +++F+++YVDDIL+IGNNI M++SV+T L NSF M DLGE YILGI+IYRDRS+RL+G Sbjct: 394 SSVVFLILYVDDILLIGNNILMLESVKTSLKNSFSMMDLGEAAYILGIKIYRDRSRRLIG 453 Query: 541 L 543 L Sbjct: 454 L 454 Score = 37.4 bits (85), Expect(2) = 2e-70 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +Q TYIDKVL+ FS+E +KK + M H L K Sbjct: 449 RRLIGLSQDTYIDKVLKRFSMEEAKKGFLPMSHGRHLSK 487 >gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1248 Score = 251 bits (642), Expect(2) = 7e-70 Identities = 119/181 (65%), Positives = 148/181 (81%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM Sbjct: 812 VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 871 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIY LKQASRSWNI FD+ +K+ FV+++E+ CVY K G Sbjct: 872 TQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISG 931 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L SF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 932 SALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIG 991 Query: 541 L 543 L Sbjct: 992 L 992 Score = 40.4 bits (93), Expect(2) = 7e-70 Identities = 18/39 (46%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F++++SKK + M H I L K Sbjct: 987 KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 1025 >gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1161 Score = 251 bits (642), Expect(2) = 7e-70 Identities = 119/181 (65%), Positives = 148/181 (81%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM Sbjct: 725 VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 784 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIY LKQASRSWNI FD+ +K+ FV+++E+ CVY K G Sbjct: 785 TQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISG 844 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L SF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 845 SALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIG 904 Query: 541 L 543 L Sbjct: 905 L 905 Score = 40.4 bits (93), Expect(2) = 7e-70 Identities = 18/39 (46%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F++++SKK + M H I L K Sbjct: 900 KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 938 >gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 251 bits (641), Expect(2) = 7e-70 Identities = 117/181 (64%), Positives = 146/181 (80%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+G+ Q GIDYDET+SPVA +KSIRILLA AA+YDY+ WQMDV+ AFLNG LE VYM Sbjct: 510 VAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYM 569 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQPEGFT VCKL +SIYGLKQASRSWN+ F++AIK FDF+R++E+ CVY K G Sbjct: 570 TQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSG 629 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 + F+V+YVDDIL++GN+I ++QSV+TWL + F MKD+GE YILGIRIYRDR +++G Sbjct: 630 SAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIG 689 Query: 541 L 543 L Sbjct: 690 L 690 Score = 40.8 bits (94), Expect(2) = 7e-70 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = +3 Query: 522 IQKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 + K++ +Q TYIDKVL F++ +SKK I M H I L K Sbjct: 684 LNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSK 723 >gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis] Length = 1313 Score = 254 bits (648), Expect(2) = 1e-69 Identities = 121/181 (66%), Positives = 149/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFS VA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG+L DVYM Sbjct: 859 VAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYM 918 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQPEGF + + VCKLQKSIYGLKQASRSWNI FD+ IK F FV++KE+ CVY K G Sbjct: 919 TQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSG 978 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++ +++YVDDIL+IGN+I M++SV+ L NSF MKDLGE YILGI+IYRDRS+RL+G Sbjct: 979 STLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIG 1038 Query: 541 L 543 L Sbjct: 1039 L 1039 Score = 37.4 bits (85), Expect(2) = 1e-69 Identities = 16/35 (45%), Positives = 26/35 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSI 629 ++++ +QSTYIDKVL F+++N+KK + M H I Sbjct: 1034 RRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGI 1068 >gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1073 Score = 251 bits (642), Expect(2) = 2e-69 Identities = 118/181 (65%), Positives = 149/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQM+V+ AFLNG + DVYM Sbjct: 793 VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYM 852 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ +K+ F++++E+ CVY K G Sbjct: 853 TQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISG 912 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 913 SALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 972 Query: 541 L 543 L Sbjct: 973 L 973 Score = 39.3 bits (90), Expect(2) = 2e-69 Identities = 17/39 (43%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDK+L+ F++++SKK + M H I L K Sbjct: 968 KRLIGLSQSTYIDKMLKRFNMQDSKKGFLPMSHGINLGK 1006 >gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1063 Score = 251 bits (642), Expect(2) = 2e-69 Identities = 118/181 (65%), Positives = 149/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQM+V+ AFLNG + DVYM Sbjct: 783 VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYM 842 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ +K+ F++++E+ CVY K G Sbjct: 843 TQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISG 902 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 903 SALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 962 Query: 541 L 543 L Sbjct: 963 L 963 Score = 39.3 bits (90), Expect(2) = 2e-69 Identities = 17/39 (43%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDK+L+ F++++SKK + M H I L K Sbjct: 958 KRLIGLSQSTYIDKMLKRFNMQDSKKGFLPMSHGINLGK 996 >gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w] Length = 1303 Score = 253 bits (645), Expect(2) = 3e-69 Identities = 118/181 (65%), Positives = 144/181 (79%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF+Q G+DYDETFSPVAKIKSIRI+LAIAA++DY+ WQMDV+ AFLNG+L DVYM Sbjct: 846 VAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYM 905 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 QPEGF PN VCKL++SIYGLKQASRSWN+CF + +K F F RS+++ CVY K G Sbjct: 906 NQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASG 965 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 + F+V+YVDDIL++GN+I +Q V+ WL F MKDLGE YILGIRI RDR KRL+G Sbjct: 966 SIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIG 1025 Query: 541 L 543 L Sbjct: 1026 L 1026 Score = 37.0 bits (84), Expect(2) = 3e-69 Identities = 16/39 (41%), Positives = 28/39 (71%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +Q TY++KVL+ FS+ENSKK + + + KL K Sbjct: 1021 KRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSK 1059 >gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 810 Score = 247 bits (631), Expect(2) = 3e-69 Identities = 117/181 (64%), Positives = 147/181 (81%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +KSIRI+L IAAY+DY+ WQMDV+ A LNG L+ DVYM Sbjct: 569 VAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYFDYEIWQMDVKTALLNGNLDEDVYM 628 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLK+ASRSWNI FDK +K+ FV+++E+ CVY K G Sbjct: 629 TQPKGFVDPQSAKKICKLQKSIYGLKKASRSWNIRFDKVVKALGFVKNEEEPCVYKKISG 688 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVD+IL+IGN+I M++SV+T L NSF MKDLGE ILGIRIYRDRSKRL+G Sbjct: 689 SALVFLILYVDEILLIGNDIPMLESVKTSLKNSFLMKDLGEPTCILGIRIYRDRSKRLIG 748 Query: 541 L 543 L Sbjct: 749 L 749 Score = 42.4 bits (98), Expect(2) = 3e-69 Identities = 19/39 (48%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F+++NSKK + M H I L K Sbjct: 744 KRLIGLSQSTYIDKVLKRFNMQNSKKGFLPMSHGINLGK 782 >gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group] gi|62701883|gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|108864259|gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1184 Score = 246 bits (629), Expect(2) = 2e-68 Identities = 117/181 (64%), Positives = 146/181 (80%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPVA +K I I+LAIAAY+DY+ WQM V+ AFLNG L+ DVYM Sbjct: 734 VAKGFRQIQGVDYDETFSPVAMLKFIWIVLAIAAYFDYEIWQMYVKTAFLNGNLDEDVYM 793 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKL +SIYGLKQASRSWNI FD+ +K+ FVR++E+ CVY K G Sbjct: 794 TQPKGFDDPQSAKKICKLHQSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISG 853 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 854 SALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 913 Query: 541 L 543 L Sbjct: 914 L 914 Score = 40.4 bits (93), Expect(2) = 2e-68 Identities = 18/39 (46%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F++++SKK + M H I L K Sbjct: 909 KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 947 >gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1142 Score = 248 bits (632), Expect(2) = 3e-68 Identities = 118/181 (65%), Positives = 145/181 (80%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETF PVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM Sbjct: 786 VAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 845 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ +K+ FV+++E CVY K G Sbjct: 846 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISG 905 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV L NSF MKDLGE YILGIRIYRD SKRL+G Sbjct: 906 SALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIG 965 Query: 541 L 543 L Sbjct: 966 L 966 Score = 38.9 bits (89), Expect(2) = 3e-68 Identities = 17/39 (43%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ ++STYIDKVL+ F++++SKK + M H I L K Sbjct: 961 KRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNK 999 >gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1084 Score = 248 bits (632), Expect(2) = 3e-68 Identities = 118/181 (65%), Positives = 145/181 (80%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETF PVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM Sbjct: 728 VAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 787 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ +K+ FV+++E CVY K G Sbjct: 788 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISG 847 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV L NSF MKDLGE YILGIRIYRD SKRL+G Sbjct: 848 SALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIG 907 Query: 541 L 543 L Sbjct: 908 L 908 Score = 38.9 bits (89), Expect(2) = 3e-68 Identities = 17/39 (43%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ ++STYIDKVL+ F++++SKK + M H I L K Sbjct: 903 KRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNK 941 >emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group] Length = 746 Score = 244 bits (622), Expect(2) = 9e-67 Identities = 116/178 (65%), Positives = 143/178 (80%) Frame = +1 Query: 10 GFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYMTQP 189 GF Q +G+DYDETFSPV +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYMTQP Sbjct: 475 GFRQIQGVDYDETFSPVTMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQP 534 Query: 190 EGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKGENI 369 +GF +CKLQKSIYGLKQASRSWNI FD+ +K+ FV+++E+ CVY K + Sbjct: 535 KGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKINRSAL 594 Query: 370 IFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLGL 543 F+++YVDDIL+IGN+I M++S +T L NSF MKDLGE YILGIRIYRDRSKRL+GL Sbjct: 595 GFLILYVDDILLIGNDIPMLKSAKTSLKNSFSMKDLGEATYILGIRIYRDRSKRLIGL 652 Score = 37.7 bits (86), Expect(2) = 9e-67 Identities = 16/39 (41%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYI+K+L+ F++++SKK + M H I L K Sbjct: 647 KRLIGLSQSTYINKMLKRFNMQDSKKGFLSMSHGINLGK 685 >gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis] Length = 566 Score = 243 bits (621), Expect(2) = 9e-67 Identities = 114/181 (62%), Positives = 144/181 (79%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q + +DYDE FSPVA ++SI I+LAIAAY+DY+ WQMDV+ AFLNG L DVYM Sbjct: 324 VAKGFKQIQCVDYDEAFSPVAMLESIPIILAIAAYFDYEIWQMDVKMAFLNGNLSEDVYM 383 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQPE F VCKL KSIYGLKQASRSWNI FD+ +K FDF++++E+ CVY K G Sbjct: 384 TQPESFVDLKEARKVCKLNKSIYGLKQASRSWNIRFDEVVKGFDFIKNEEEPCVYKKVSG 443 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL++ N+I M++SV+T L NSF +KDLG+ YILGIRIYRDRSKRL+G Sbjct: 444 SKLVFLILYVDDILLVENDIPMLESVKTSLRNSFSIKDLGDASYILGIRIYRDRSKRLIG 503 Query: 541 L 543 L Sbjct: 504 L 504 Score = 38.1 bits (87), Expect(2) = 9e-67 Identities = 16/39 (41%), Positives = 27/39 (69%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +Q YIDKVL+ F++++SK +LM H I L K Sbjct: 499 KRLIGLSQDMYIDKVLKRFNMQDSKNGFLLMAHGINLSK 537 >gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group] Length = 700 Score = 253 bits (647), Expect = 6e-65 Identities = 120/181 (66%), Positives = 150/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G++YDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFL+G L+ DVYM Sbjct: 417 VAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYM 476 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ IK+ FV+++E+ CVY K G Sbjct: 477 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKING 536 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 537 SALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 596 Query: 541 L 543 L Sbjct: 597 L 597 >gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 655 Score = 253 bits (647), Expect = 6e-65 Identities = 120/181 (66%), Positives = 150/181 (82%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G++YDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFL+G L+ DVYM Sbjct: 372 VAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYM 431 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ IK+ FV+++E+ CVY K G Sbjct: 432 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKING 491 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE YILGIRIYRDRSKRL+G Sbjct: 492 SALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 551 Query: 541 L 543 L Sbjct: 552 L 552 >gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Japonica Group] gi|22711524|gb|AAN04499.1| Putative polyprotein [Oryza sativa Japonica Group] gi|31429946|gb|AAP51930.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 309 Score = 231 bits (590), Expect(2) = 5e-64 Identities = 110/181 (60%), Positives = 145/181 (80%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSPV +KSI+I+LAIAAY++Y+ W ++V+ AFLNG+L DVYM Sbjct: 50 VAKGFRQIQGVDYDETFSPVTMLKSIQIVLAIAAYFNYEIWLVNVKIAFLNGDLNEDVYM 109 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKL KSIYGLKQAS SW+I FD+ +K+ FV+++E+ VY K G Sbjct: 110 TQPKGFGDPQSAKKICKLHKSIYGLKQASWSWDIRFDEVVKALGFVKNEEEPRVYKKISG 169 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L NSF +KDLGE YILGIRIYRDRSKRL+G Sbjct: 170 NALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSVKDLGEAAYILGIRIYRDRSKRLIG 229 Query: 541 L 543 L Sbjct: 230 L 230 Score = 40.8 bits (94), Expect(2) = 5e-64 Identities = 18/39 (46%), Positives = 29/39 (74%) Frame = +3 Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641 ++++ +QSTYIDKVL+ F++++SKK + M H I L K Sbjct: 225 KRLIGLSQSTYIDKVLKRFNMQDSKKGFLSMSHGINLGK 263 >gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 829 Score = 250 bits (638), Expect = 6e-64 Identities = 117/181 (64%), Positives = 147/181 (81%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF Q +G+DYDETFSP A +KSIRI+LAIAAY++Y+ WQMDV+ FLNG L+ DVYM Sbjct: 648 VAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQMDVKTTFLNGNLDEDVYM 707 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 TQP+GF +CKLQKSIYGLKQASRSWNI FD+ +K+ FV+++E+ CVY K G Sbjct: 708 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALRFVKNEEEPCVYKKISG 767 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 ++F+++YVDDIL+IGN+I M++SV+T L N F MKDLGE YILGIRIYRDRSKRL+G Sbjct: 768 SALVFLILYVDDILLIGNDILMLESVKTSLKNRFSMKDLGEAAYILGIRIYRDRSKRLIG 827 Query: 541 L 543 L Sbjct: 828 L 828 >emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] Length = 668 Score = 234 bits (597), Expect(2) = 2e-63 Identities = 107/181 (59%), Positives = 143/181 (79%) Frame = +1 Query: 1 VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180 VA+GF+Q+EG+DY++TFSPV +KSIRILL+I AYYDY+ WQMDV+ FLNG LE +YM Sbjct: 213 VAKGFTQKEGVDYEDTFSPVXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYM 272 Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360 QPEGF + + VCKLQ+SIYGLKQASRSWNI F++AIKS+ F ++ + CVY + G Sbjct: 273 VQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGG 332 Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540 + ++F+V+YVDDIL+IGN++ + V+ WL++ F+MKDLGE YILGI++ RDR RLL Sbjct: 333 DKVVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLA 392 Query: 541 L 543 L Sbjct: 393 L 393 Score = 36.2 bits (82), Expect(2) = 2e-63 Identities = 16/39 (41%), Positives = 27/39 (69%) Frame = +3 Query: 528 KVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLKK 644 +++ +Q+ YIDKVL F++ENSKK ++ H + L K+ Sbjct: 389 RLLALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKE 427