BLASTX nr result

ID: Mentha23_contig00036045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00036045
         (928 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     260   2e-72
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776...   256   2e-70
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   251   7e-70
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     251   7e-70
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   251   7e-70
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   254   1e-69
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   251   2e-69
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     251   2e-69
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   253   3e-69
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...   247   3e-69
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   246   2e-68
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   248   3e-68
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     248   3e-68
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]         244   9e-67
gb|ADB85411.1| putative retrotransposon protein [Phyllostachys e...   243   9e-67
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   253   6e-65
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...   253   6e-65
gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Jap...   231   5e-64
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   250   6e-64
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   234   2e-63

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  260 bits (665), Expect(2) = 2e-72
 Identities = 122/181 (67%), Positives = 149/181 (82%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L  DVYM
Sbjct: 863  VAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYM 922

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
             QP+GF     P  +CKLQKSIYGLKQASRSWNI FD+ IK F F++++E+ CVY K  G
Sbjct: 923  IQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSG 982

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              I+F+++YVDDIL+IGN+I M++SV++ L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 983  SAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 1042

Query: 541  L 543
            L
Sbjct: 1043 L 1043



 Score = 40.4 bits (93), Expect(2) = 2e-72
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDKVL+ F++ +SKK  + M H I L K
Sbjct: 1038 KRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSK 1076


>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
           italica]
          Length = 1686

 Score =  256 bits (655), Expect(2) = 2e-70
 Identities = 119/181 (65%), Positives = 147/181 (81%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF Q +G+DYDETFSPV  +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L  DVYM
Sbjct: 274 VAKGFRQVQGVDYDETFSPVVMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLAKDVYM 333

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            QPEGF        VCKLQ+SIYGLKQASRSWNI FD+ +K FDF +++E+ CVY K  G
Sbjct: 334 IQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSG 393

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
            +++F+++YVDDIL+IGNNI M++SV+T L NSF M DLGE  YILGI+IYRDRS+RL+G
Sbjct: 394 SSVVFLILYVDDILLIGNNILMLESVKTSLKNSFSMMDLGEAAYILGIKIYRDRSRRLIG 453

Query: 541 L 543
           L
Sbjct: 454 L 454



 Score = 37.4 bits (85), Expect(2) = 2e-70
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           ++++  +Q TYIDKVL+ FS+E +KK  + M H   L K
Sbjct: 449 RRLIGLSQDTYIDKVLKRFSMEEAKKGFLPMSHGRHLSK 487


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  251 bits (642), Expect(2) = 7e-70
 Identities = 119/181 (65%), Positives = 148/181 (81%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM
Sbjct: 812  VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 871

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIY LKQASRSWNI FD+ +K+  FV+++E+ CVY K  G
Sbjct: 872  TQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISG 931

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L  SF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 932  SALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIG 991

Query: 541  L 543
            L
Sbjct: 992  L 992



 Score = 40.4 bits (93), Expect(2) = 7e-70
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDKVL+ F++++SKK  + M H I L K
Sbjct: 987  KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 1025


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  251 bits (642), Expect(2) = 7e-70
 Identities = 119/181 (65%), Positives = 148/181 (81%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM
Sbjct: 725  VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 784

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIY LKQASRSWNI FD+ +K+  FV+++E+ CVY K  G
Sbjct: 785  TQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISG 844

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L  SF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 845  SALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIG 904

Query: 541  L 543
            L
Sbjct: 905  L 905



 Score = 40.4 bits (93), Expect(2) = 7e-70
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDKVL+ F++++SKK  + M H I L K
Sbjct: 900  KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 938


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  251 bits (641), Expect(2) = 7e-70
 Identities = 117/181 (64%), Positives = 146/181 (80%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+G+ Q  GIDYDET+SPVA +KSIRILLA AA+YDY+ WQMDV+ AFLNG LE  VYM
Sbjct: 510  VAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYM 569

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQPEGFT       VCKL +SIYGLKQASRSWN+ F++AIK FDF+R++E+ CVY K  G
Sbjct: 570  TQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSG 629

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              + F+V+YVDDIL++GN+I ++QSV+TWL + F MKD+GE  YILGIRIYRDR  +++G
Sbjct: 630  SAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIG 689

Query: 541  L 543
            L
Sbjct: 690  L 690



 Score = 40.8 bits (94), Expect(2) = 7e-70
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +3

Query: 522 IQKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           + K++  +Q TYIDKVL  F++ +SKK  I M H I L K
Sbjct: 684 LNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSK 723


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  254 bits (648), Expect(2) = 1e-69
 Identities = 121/181 (66%), Positives = 149/181 (82%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFS VA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG+L  DVYM
Sbjct: 859  VAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYM 918

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQPEGF   +  + VCKLQKSIYGLKQASRSWNI FD+ IK F FV++KE+ CVY K  G
Sbjct: 919  TQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSG 978

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++ +++YVDDIL+IGN+I M++SV+  L NSF MKDLGE  YILGI+IYRDRS+RL+G
Sbjct: 979  STLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIG 1038

Query: 541  L 543
            L
Sbjct: 1039 L 1039



 Score = 37.4 bits (85), Expect(2) = 1e-69
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSI 629
            ++++  +QSTYIDKVL  F+++N+KK  + M H I
Sbjct: 1034 RRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGI 1068


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  251 bits (642), Expect(2) = 2e-69
 Identities = 118/181 (65%), Positives = 149/181 (82%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQM+V+ AFLNG  + DVYM
Sbjct: 793  VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYM 852

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  F++++E+ CVY K  G
Sbjct: 853  TQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISG 912

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 913  SALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 972

Query: 541  L 543
            L
Sbjct: 973  L 973



 Score = 39.3 bits (90), Expect(2) = 2e-69
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDK+L+ F++++SKK  + M H I L K
Sbjct: 968  KRLIGLSQSTYIDKMLKRFNMQDSKKGFLPMSHGINLGK 1006


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  251 bits (642), Expect(2) = 2e-69
 Identities = 118/181 (65%), Positives = 149/181 (82%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+LAIAAY+DY+ WQM+V+ AFLNG  + DVYM
Sbjct: 783  VAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYM 842

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  F++++E+ CVY K  G
Sbjct: 843  TQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISG 902

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 903  SALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 962

Query: 541  L 543
            L
Sbjct: 963  L 963



 Score = 39.3 bits (90), Expect(2) = 2e-69
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDK+L+ F++++SKK  + M H I L K
Sbjct: 958  KRLIGLSQSTYIDKMLKRFNMQDSKKGFLPMSHGINLGK 996


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  253 bits (645), Expect(2) = 3e-69
 Identities = 118/181 (65%), Positives = 144/181 (79%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF+Q  G+DYDETFSPVAKIKSIRI+LAIAA++DY+ WQMDV+ AFLNG+L  DVYM
Sbjct: 846  VAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYM 905

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
             QPEGF     PN VCKL++SIYGLKQASRSWN+CF + +K F F RS+++ CVY K  G
Sbjct: 906  NQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASG 965

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              + F+V+YVDDIL++GN+I  +Q V+ WL   F MKDLGE  YILGIRI RDR KRL+G
Sbjct: 966  SIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIG 1025

Query: 541  L 543
            L
Sbjct: 1026 L 1026



 Score = 37.0 bits (84), Expect(2) = 3e-69
 Identities = 16/39 (41%), Positives = 28/39 (71%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +Q TY++KVL+ FS+ENSKK  + +  + KL K
Sbjct: 1021 KRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSK 1059


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 810

 Score =  247 bits (631), Expect(2) = 3e-69
 Identities = 117/181 (64%), Positives = 147/181 (81%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +KSIRI+L IAAY+DY+ WQMDV+ A LNG L+ DVYM
Sbjct: 569  VAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYFDYEIWQMDVKTALLNGNLDEDVYM 628

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLK+ASRSWNI FDK +K+  FV+++E+ CVY K  G
Sbjct: 629  TQPKGFVDPQSAKKICKLQKSIYGLKKASRSWNIRFDKVVKALGFVKNEEEPCVYKKISG 688

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVD+IL+IGN+I M++SV+T L NSF MKDLGE   ILGIRIYRDRSKRL+G
Sbjct: 689  SALVFLILYVDEILLIGNDIPMLESVKTSLKNSFLMKDLGEPTCILGIRIYRDRSKRLIG 748

Query: 541  L 543
            L
Sbjct: 749  L 749



 Score = 42.4 bits (98), Expect(2) = 3e-69
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           ++++  +QSTYIDKVL+ F+++NSKK  + M H I L K
Sbjct: 744 KRLIGLSQSTYIDKVLKRFNMQNSKKGFLPMSHGINLGK 782


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  246 bits (629), Expect(2) = 2e-68
 Identities = 117/181 (64%), Positives = 146/181 (80%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSPVA +K I I+LAIAAY+DY+ WQM V+ AFLNG L+ DVYM
Sbjct: 734  VAKGFRQIQGVDYDETFSPVAMLKFIWIVLAIAAYFDYEIWQMYVKTAFLNGNLDEDVYM 793

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKL +SIYGLKQASRSWNI FD+ +K+  FVR++E+ CVY K  G
Sbjct: 794  TQPKGFDDPQSAKKICKLHQSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISG 853

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 854  SALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 913

Query: 541  L 543
            L
Sbjct: 914  L 914



 Score = 40.4 bits (93), Expect(2) = 2e-68
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  +QSTYIDKVL+ F++++SKK  + M H I L K
Sbjct: 909  KRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGK 947


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  248 bits (632), Expect(2) = 3e-68
 Identities = 118/181 (65%), Positives = 145/181 (80%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETF PVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM
Sbjct: 786  VAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 845

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  FV+++E  CVY K  G
Sbjct: 846  TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISG 905

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV   L NSF MKDLGE  YILGIRIYRD SKRL+G
Sbjct: 906  SALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIG 965

Query: 541  L 543
            L
Sbjct: 966  L 966



 Score = 38.9 bits (89), Expect(2) = 3e-68
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  ++STYIDKVL+ F++++SKK  + M H I L K
Sbjct: 961  KRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNK 999


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  248 bits (632), Expect(2) = 3e-68
 Identities = 118/181 (65%), Positives = 145/181 (80%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETF PVA +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYM
Sbjct: 728  VAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYM 787

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  FV+++E  CVY K  G
Sbjct: 788  TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISG 847

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV   L NSF MKDLGE  YILGIRIYRD SKRL+G
Sbjct: 848  SALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIG 907

Query: 541  L 543
            L
Sbjct: 908  L 908



 Score = 38.9 bits (89), Expect(2) = 3e-68
 Identities = 17/39 (43%), Positives = 29/39 (74%)
 Frame = +3

Query: 525  QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
            ++++  ++STYIDKVL+ F++++SKK  + M H I L K
Sbjct: 903  KRLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNK 941


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score =  244 bits (622), Expect(2) = 9e-67
 Identities = 116/178 (65%), Positives = 143/178 (80%)
 Frame = +1

Query: 10   GFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYMTQP 189
            GF Q +G+DYDETFSPV  +KSIRI+LAIAAY+DY+ WQMDV+ AFLNG L+ DVYMTQP
Sbjct: 475  GFRQIQGVDYDETFSPVTMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQP 534

Query: 190  EGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKGENI 369
            +GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  FV+++E+ CVY K     +
Sbjct: 535  KGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKINRSAL 594

Query: 370  IFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLGL 543
             F+++YVDDIL+IGN+I M++S +T L NSF MKDLGE  YILGIRIYRDRSKRL+GL
Sbjct: 595  GFLILYVDDILLIGNDIPMLKSAKTSLKNSFSMKDLGEATYILGIRIYRDRSKRLIGL 652



 Score = 37.7 bits (86), Expect(2) = 9e-67
 Identities = 16/39 (41%), Positives = 29/39 (74%)
 Frame = +3

Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           ++++  +QSTYI+K+L+ F++++SKK  + M H I L K
Sbjct: 647 KRLIGLSQSTYINKMLKRFNMQDSKKGFLSMSHGINLGK 685


>gb|ADB85411.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 566

 Score =  243 bits (621), Expect(2) = 9e-67
 Identities = 114/181 (62%), Positives = 144/181 (79%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF Q + +DYDE FSPVA ++SI I+LAIAAY+DY+ WQMDV+ AFLNG L  DVYM
Sbjct: 324 VAKGFKQIQCVDYDEAFSPVAMLESIPIILAIAAYFDYEIWQMDVKMAFLNGNLSEDVYM 383

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
           TQPE F        VCKL KSIYGLKQASRSWNI FD+ +K FDF++++E+ CVY K  G
Sbjct: 384 TQPESFVDLKEARKVCKLNKSIYGLKQASRSWNIRFDEVVKGFDFIKNEEEPCVYKKVSG 443

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
             ++F+++YVDDIL++ N+I M++SV+T L NSF +KDLG+  YILGIRIYRDRSKRL+G
Sbjct: 444 SKLVFLILYVDDILLVENDIPMLESVKTSLRNSFSIKDLGDASYILGIRIYRDRSKRLIG 503

Query: 541 L 543
           L
Sbjct: 504 L 504



 Score = 38.1 bits (87), Expect(2) = 9e-67
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +3

Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           ++++  +Q  YIDKVL+ F++++SK   +LM H I L K
Sbjct: 499 KRLIGLSQDMYIDKVLKRFNMQDSKNGFLLMAHGINLSK 537


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  253 bits (647), Expect = 6e-65
 Identities = 120/181 (66%), Positives = 150/181 (82%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF Q +G++YDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFL+G L+ DVYM
Sbjct: 417 VAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYM 476

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
           TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ IK+  FV+++E+ CVY K  G
Sbjct: 477 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKING 536

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
             ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 537 SALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 596

Query: 541 L 543
           L
Sbjct: 597 L 597


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  253 bits (647), Expect = 6e-65
 Identities = 120/181 (66%), Positives = 150/181 (82%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF Q +G++YDETFSPVA +KSIRI+LAIAAY+DY+ WQMDV+ AFL+G L+ DVYM
Sbjct: 372 VAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYM 431

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
           TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ IK+  FV+++E+ CVY K  G
Sbjct: 432 TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKING 491

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
             ++F+++YVDDIL+IGN+I M++SV+T L NSF MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 492 SALMFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIG 551

Query: 541 L 543
           L
Sbjct: 552 L 552


>gb|AAL83352.1|AC074282_19 Putative polyprotein [Oryza sativa Japonica Group]
           gi|22711524|gb|AAN04499.1| Putative polyprotein [Oryza
           sativa Japonica Group] gi|31429946|gb|AAP51930.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 309

 Score =  231 bits (590), Expect(2) = 5e-64
 Identities = 110/181 (60%), Positives = 145/181 (80%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF Q +G+DYDETFSPV  +KSI+I+LAIAAY++Y+ W ++V+ AFLNG+L  DVYM
Sbjct: 50  VAKGFRQIQGVDYDETFSPVTMLKSIQIVLAIAAYFNYEIWLVNVKIAFLNGDLNEDVYM 109

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
           TQP+GF        +CKL KSIYGLKQAS SW+I FD+ +K+  FV+++E+  VY K  G
Sbjct: 110 TQPKGFGDPQSAKKICKLHKSIYGLKQASWSWDIRFDEVVKALGFVKNEEEPRVYKKISG 169

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
             ++F+++YVDDIL+IGN+I M++SV+T L NSF +KDLGE  YILGIRIYRDRSKRL+G
Sbjct: 170 NALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSVKDLGEAAYILGIRIYRDRSKRLIG 229

Query: 541 L 543
           L
Sbjct: 230 L 230



 Score = 40.8 bits (94), Expect(2) = 5e-64
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +3

Query: 525 QKVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLK 641
           ++++  +QSTYIDKVL+ F++++SKK  + M H I L K
Sbjct: 225 KRLIGLSQSTYIDKVLKRFNMQDSKKGFLSMSHGINLGK 263


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 829

 Score =  250 bits (638), Expect = 6e-64
 Identities = 117/181 (64%), Positives = 147/181 (81%)
 Frame = +1

Query: 1    VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
            VA+GF Q +G+DYDETFSP A +KSIRI+LAIAAY++Y+ WQMDV+  FLNG L+ DVYM
Sbjct: 648  VAKGFRQIQGVDYDETFSPFAMLKSIRIVLAIAAYFNYEIWQMDVKTTFLNGNLDEDVYM 707

Query: 181  TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            TQP+GF        +CKLQKSIYGLKQASRSWNI FD+ +K+  FV+++E+ CVY K  G
Sbjct: 708  TQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALRFVKNEEEPCVYKKISG 767

Query: 361  ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
              ++F+++YVDDIL+IGN+I M++SV+T L N F MKDLGE  YILGIRIYRDRSKRL+G
Sbjct: 768  SALVFLILYVDDILLIGNDILMLESVKTSLKNRFSMKDLGEAAYILGIRIYRDRSKRLIG 827

Query: 541  L 543
            L
Sbjct: 828  L 828


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  234 bits (597), Expect(2) = 2e-63
 Identities = 107/181 (59%), Positives = 143/181 (79%)
 Frame = +1

Query: 1   VARGFSQREGIDYDETFSPVAKIKSIRILLAIAAYYDYDNWQMDVRNAFLNGELEGDVYM 180
           VA+GF+Q+EG+DY++TFSPV  +KSIRILL+I AYYDY+ WQMDV+  FLNG LE  +YM
Sbjct: 213 VAKGFTQKEGVDYEDTFSPVXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYM 272

Query: 181 TQPEGFTSQSRPNAVCKLQKSIYGLKQASRSWNICFDKAIKSFDFVRSKEDYCVYSKRKG 360
            QPEGF  + +   VCKLQ+SIYGLKQASRSWNI F++AIKS+ F ++  + CVY +  G
Sbjct: 273 VQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGG 332

Query: 361 ENIIFIVIYVDDILIIGNNIRMMQSVRTWLSNSFKMKDLGEVYYILGIRIYRDRSKRLLG 540
           + ++F+V+YVDDIL+IGN++  +  V+ WL++ F+MKDLGE  YILGI++ RDR  RLL 
Sbjct: 333 DKVVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLA 392

Query: 541 L 543
           L
Sbjct: 393 L 393



 Score = 36.2 bits (82), Expect(2) = 2e-63
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +3

Query: 528 KVVRTAQSTYIDKVLRNFSIENSKKWSILMGHSIKLLKK 644
           +++  +Q+ YIDKVL  F++ENSKK ++   H + L K+
Sbjct: 389 RLLALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKE 427


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