BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00035415
         (399 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...   108   2e-32
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus...   108   2e-32
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   113   2e-31
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   107   7e-31
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   107   7e-31
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   108   6e-30
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              110   7e-30
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   110   7e-30
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   112   7e-30
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   108   2e-29
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   108   2e-29
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]      110   6e-29
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   107   1e-28
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]       109   1e-28
gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macr...   110   2e-28
gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidenta...   108   5e-28
gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]     108   8e-28
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]      104   8e-28
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   100   1e-27
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...   107   1e-27

>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score =  108 bits (270), Expect(2) = 2e-32
 Identities = 53/79 (67%), Positives = 65/79 (82%)
 Frame = +1

Query: 28   EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
            +A GF++NSFYTGLSA + FF+TM GR  LVDT VKT++TGY+  RL+KA+EDLS+ YD 
Sbjct: 815  DAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDG 874

Query: 208  TVRNASGSIVQFIYGDDAM 264
            TVRNAS  IVQF+YG DAM
Sbjct: 875  TVRNASVCIVQFVYGGDAM 893



 Score = 56.2 bits (134), Expect(2) = 2e-32
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            +DP  MEEKSGL LNFERL MKAKATC A + K L+  EI++
Sbjct: 893  MDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDK 934


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
          Length = 1109

 Score =  108 bits (270), Expect(2) = 2e-32
 Identities = 53/79 (67%), Positives = 65/79 (82%)
 Frame = +1

Query: 28  EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
           +A GF++NSFYTGLSA + FF+TM GR  LVDT VKT++TGY+  RL+KA+EDLS+ YD 
Sbjct: 530 DAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDG 589

Query: 208 TVRNASGSIVQFIYGDDAM 264
           TVRNAS  IVQF+YG DAM
Sbjct: 590 TVRNASVCIVQFVYGGDAM 608



 Score = 56.2 bits (134), Expect(2) = 2e-32
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
           +DP  MEEKSGL LNFERL MKAKATC A + K L+  EI++
Sbjct: 608 MDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDK 649


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  113 bits (282), Expect(2) = 2e-31
 Identities = 55/78 (70%), Positives = 64/78 (82%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFY+GL+A + FF+TM GR  LVDT VKT+ETGY+  RLIKA+EDLS+ YD T
Sbjct: 833  AKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNT 892

Query: 211  VRNASGSIVQFIYGDDAM 264
            VRNASG IVQFIYGDD M
Sbjct: 893  VRNASGCIVQFIYGDDGM 910



 Score = 48.1 bits (113), Expect(2) = 2e-31
 Identities = 24/44 (54%), Positives = 28/44 (63%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEEYL 395
            +DPA ME KSG  LNF+RLLMK KATC   + K L    I + L
Sbjct: 910  MDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQML 953


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  107 bits (266), Expect(2) = 7e-31
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFY+GL+A + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD++
Sbjct: 827  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 886

Query: 211  VRNASGSIVQFIYGDDAM 264
            VRNA G IVQF YGDD M
Sbjct: 887  VRNAGGCIVQFCYGDDGM 904



 Score = 52.8 bits (125), Expect(2) = 7e-31
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = +3

Query: 258  CY----VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            CY    +DPA ME KSG  LNFERL +KAKATC +  +K+L+ SE  E
Sbjct: 898  CYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSE 945


>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score =  107 bits (266), Expect(2) = 7e-31
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFY+GL+A + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD++
Sbjct: 525 AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 584

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNA G IVQF YGDD M
Sbjct: 585 VRNAGGCIVQFCYGDDGM 602



 Score = 52.8 bits (125), Expect(2) = 7e-31
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = +3

Query: 258 CY----VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
           CY    +DPA ME KSG  LNFERL +KAKATC +  +K+L+ SE  E
Sbjct: 596 CYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSE 643


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  108 bits (270), Expect(2) = 6e-30
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = +1

Query: 28   EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
            +A GF++NSFYTGL   + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD+
Sbjct: 817  DAKGFVQNSFYTGLLPTEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDS 876

Query: 208  TVRNASGSIVQFIYGDDAM 264
            TVRNASG IVQF YGDD +
Sbjct: 877  TVRNASGCIVQFTYGDDGL 895



 Score = 48.1 bits (113), Expect(2) = 6e-30
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIE 386
            +DPA MEEK+G  LNFERL MKAKATC +     L   +I+
Sbjct: 895  LDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDID 935


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  110 bits (275), Expect(2) = 7e-30
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 28   EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
            +A GF+ +SFYTGL+A + FF+TM GR  LVDT VKT++TGY+  RL+KA+EDLS+ YD 
Sbjct: 826  DAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDE 885

Query: 208  TVRNASGSIVQFIYGDDAM 264
            TVRNA+GSIVQF+YGDD M
Sbjct: 886  TVRNANGSIVQFLYGDDGM 904



 Score = 45.8 bits (107), Expect(2) = 7e-30
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            +DPA ME K G  LNF RL +K KATC A ++  L+  +IEE
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEE 945


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  110 bits (275), Expect(2) = 7e-30
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 28   EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
            +A GF+ +SFYTGL+A + FF+TM GR  LVDT VKT++TGY+  RL+KA+EDLS+ YD 
Sbjct: 826  DAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDE 885

Query: 208  TVRNASGSIVQFIYGDDAM 264
            TVRNA+GSIVQF+YGDD M
Sbjct: 886  TVRNANGSIVQFLYGDDGM 904



 Score = 45.8 bits (107), Expect(2) = 7e-30
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            +DPA ME K G  LNF RL +K KATC A ++  L+  +IEE
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEE 945


>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  112 bits (280), Expect(2) = 7e-30
 Identities = 52/79 (65%), Positives = 67/79 (84%)
 Frame = +1

Query: 28  EAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDT 207
           +A GF++NSFYTGL+A + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD+
Sbjct: 320 DAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDS 379

Query: 208 TVRNASGSIVQFIYGDDAM 264
           TVR+ASG +VQF+YGDD M
Sbjct: 380 TVRSASGGVVQFLYGDDGM 398



 Score = 43.9 bits (102), Expect(2) = 7e-30
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI 383
           +DP+ ME K G  LN +RL MK KATC A  H  L+ +EI
Sbjct: 398 MDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPAEI 437


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  108 bits (271), Expect(2) = 2e-29
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFY+GLSA + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD +
Sbjct: 840  AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNS 899

Query: 211  VRNASGSIVQFIYGDDAM 264
            VRNA G IVQF+YGDD M
Sbjct: 900  VRNAGGCIVQFLYGDDGM 917



 Score = 46.2 bits (108), Expect(2) = 2e-29
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            +DPA ME KSG  LNF+RLLMK KATC     + L+  ++ E
Sbjct: 917  MDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSE 958


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  108 bits (271), Expect(2) = 2e-29
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFY+GLSA + FF+TM GR  LVDT VKT++TGY+  RLIKA+EDLS+ YD +
Sbjct: 833  AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNS 892

Query: 211  VRNASGSIVQFIYGDDAM 264
            VRNA G IVQF+YGDD M
Sbjct: 893  VRNAGGCIVQFLYGDDGM 910



 Score = 46.2 bits (108), Expect(2) = 2e-29
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
            +DPA ME KSG  LNF+RLLMK KATC     + L+  ++ E
Sbjct: 910  MDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSE 951


>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
          Length = 548

 Score =  110 bits (274), Expect(2) = 6e-29
 Identities = 54/78 (69%), Positives = 63/78 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFYTGL+A + FF+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS  YD T
Sbjct: 323 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGT 382

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNASG IVQ +YGDDAM
Sbjct: 383 VRNASGGIVQLLYGDDAM 400



 Score = 43.1 bits (100), Expect(2) = 6e-29
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
           +DP  ME K+G  LN +R+LMKAKATC A     L+ SEI +
Sbjct: 400 MDPVNMEGKNGTPLNLDRILMKAKATCPANGAFSLSPSEISK 441


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  107 bits (268), Expect(2) = 1e-28
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFYTGL+A + FF+TM GR  LVDT VKT++TGY+  RLIK++EDLS  YD T
Sbjct: 821  AKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDT 880

Query: 211  VRNASGSIVQFIYGDDAM 264
            VRN+SG+I+QF YGDD M
Sbjct: 881  VRNSSGTIIQFSYGDDGM 898



 Score = 44.7 bits (104), Expect(2) = 1e-28
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI 383
            +DPA ME KSG+ LN +RL MK KATC A+    L+ SEI
Sbjct: 898  MDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEI 937


>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
          Length = 548

 Score =  109 bits (273), Expect(2) = 1e-28
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFYTGL+A + FF+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS  YD+T
Sbjct: 323 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDST 382

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNASG IVQ +YGDD M
Sbjct: 383 VRNASGGIVQLLYGDDGM 400



 Score = 42.7 bits (99), Expect(2) = 1e-28
 Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI----EEYLL 398
           +DP  ME K G  LN +RLLMK KATC A     L+ SEI    EE LL
Sbjct: 400 MDPVNMEGKDGPPLNLDRLLMKTKATCPANGSVALSPSEIIRKVEERLL 448


>gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macrophyllus]
          Length = 546

 Score =  110 bits (274), Expect(2) = 2e-28
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFYTGL+A + FF+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS  YD T
Sbjct: 323 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSSHYDGT 382

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNASG +VQF+YGDD M
Sbjct: 383 VRNASGGVVQFLYGDDGM 400



 Score = 41.2 bits (95), Expect(2) = 2e-28
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI 383
           +DP  ME K G  LN +RLLMK KA C A   + L+  EI
Sbjct: 400 MDPVNMEGKDGAPLNLDRLLMKTKAICPANGSRALSVDEI 439


>gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidentalis]
          Length = 546

 Score =  108 bits (271), Expect(2) = 5e-28
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFY+GL+A + FF+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS  YD T
Sbjct: 323 AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGT 382

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNASG +VQF+YGDD M
Sbjct: 383 VRNASGGVVQFLYGDDGM 400



 Score = 41.2 bits (95), Expect(2) = 5e-28
 Identities = 22/40 (55%), Positives = 24/40 (60%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI 383
           +DP  ME K G  LN ERLLMK KA C A     L+ SEI
Sbjct: 400 MDPVNMEGKDGAPLNLERLLMKTKAICPAGGSCALSVSEI 439


>gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]
          Length = 548

 Score =  108 bits (269), Expect(2) = 8e-28
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFYTGL+A + FF+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS  YD T
Sbjct: 323 AKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSTHYDGT 382

Query: 211 VRNASGSIVQFIYGDDAMWILH 276
           VR+A+ +IVQF+YGDDAM  +H
Sbjct: 383 VRSANSAIVQFLYGDDAMDPVH 404



 Score = 41.2 bits (95), Expect(2) = 8e-28
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEIEE 389
           +DP  ME K G  LN +RLL+K KATC A     L+ SE+ +
Sbjct: 400 MDPVHMEGKDGEPLNLDRLLIKTKATCPANGSPALSVSELSK 441


>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
          Length = 547

 Score =  104 bits (260), Expect(2) = 8e-28
 Identities = 51/78 (65%), Positives = 61/78 (78%)
 Frame = +1

Query: 31  AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
           A GF+ NSFY+GL+  +  F+TM GR  LVDT VKT+ETGY+  RL+KA+EDLS+ YD T
Sbjct: 321 AKGFVANSFYSGLTPTEFLFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSIHYDET 380

Query: 211 VRNASGSIVQFIYGDDAM 264
           VRNASG IVQF YGDD M
Sbjct: 381 VRNASGGIVQFHYGDDGM 398



 Score = 44.7 bits (104), Expect(2) = 8e-28
 Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 264 VDPALMEEKSGLTLNFERLLMKAKATCLATDHKV-LTTSEIEEY 392
           +DPA ME KSG  LN +RL MK +ATC  T+  + L+ SEI +Y
Sbjct: 398 MDPAKMEGKSGTPLNLDRLFMKIQATCPTTNASIPLSPSEISQY 441


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  100 bits (248), Expect(2) = 1e-27
 Identities = 47/78 (60%), Positives = 60/78 (76%)
 Frame = +1

Query: 31   AMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLSLGYDTT 210
            A GF+ NSFY+GLSA + FF+TM GR  LVDT VKT++TGY+  RL K +EDL + YD T
Sbjct: 834  AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNT 893

Query: 211  VRNASGSIVQFIYGDDAM 264
            V++A G IVQF+YGDD +
Sbjct: 894  VQDAGGGIVQFLYGDDGL 911



 Score = 48.5 bits (114), Expect(2) = 1e-27
 Identities = 22/40 (55%), Positives = 31/40 (77%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSEI 383
            +DPA+ME K+G+ LNF+RL MK KATC A + + L+ S+I
Sbjct: 911  LDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDI 950


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score =  107 bits (266), Expect(2) = 1e-27
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = +1

Query: 13   MGDNDEAMGFIKNSFYTGLSAIKIFFNTMEGRGSLVDTVVKTSETGYIFCRLIKAMEDLS 192
            M    EA GF+ NSFY+GL+A + FF+TM GR  LVDT VKT+ TGY+  RL+KA+EDL 
Sbjct: 824  MSKTPEAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLL 883

Query: 193  LGYDTTVRNASGSIVQFIYGDDAM 264
            + YD TVRNASG I+QF YGDD M
Sbjct: 884  VHYDNTVRNASGCILQFTYGDDGM 907



 Score = 41.6 bits (96), Expect(2) = 1e-27
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +3

Query: 264  VDPALMEEKSGLTLNFERLLMKAKATCLATDHKVLTTSE 380
            +DP LME K G  LNF+RL +K +ATC    H    +SE
Sbjct: 907  MDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSE 945