BLASTX nr result
ID: Mentha23_contig00035240
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00035240
(637 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 245 5e-77
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 217 8e-68
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 261 1e-67
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope... 213 3e-66
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 209 2e-62
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 210 1e-61
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 199 7e-60
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put... 199 7e-60
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 199 5e-59
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 205 1e-58
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 205 1e-58
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 191 9e-57
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 180 2e-53
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 181 5e-53
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 175 8e-52
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 204 2e-50
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 204 2e-50
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 201 2e-49
ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [A... 170 5e-49
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 197 2e-48
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 245 bits (626), Expect(2) = 5e-77
Identities = 126/172 (73%), Positives = 140/172 (81%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQKI PLL HLR YSES+ALQL++YL SVK PV +FI +SSAIG L DS+SES LSKV+
Sbjct: 637 IQKISPLLSHLRDHYSESIALQLESYLSSVKTPVTEFIVNSSAIGFLTDSRSESGLSKVV 696
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGF G Q+S KGKFY+E LVKD+SSLF+ KYPS DD P E+FGLV +PLFRGLNPYQE
Sbjct: 697 QQIGFCGTQLSSKGKFYTERLVKDLSSLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQE 756
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
MVH RGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSI+
Sbjct: 757 MVHSISSREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSII 808
Score = 69.3 bits (168), Expect(2) = 5e-77
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEY N+ +I +EFCAGDPVGVLAAT+MSNPAYKAV
Sbjct: 806 SIIQFEYSANSTDIVTEFCAGDPVGVLAATSMSNPAYKAV 845
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 217 bits (553), Expect(2) = 8e-68
Identities = 112/172 (65%), Positives = 134/172 (77%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ + LLHHLR+SY+ESV +QL+ +LR+ K+PV F+ SS +G LIDSKSESA +KV+
Sbjct: 639 IQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVV 698
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLG+QISD+GKFY++TLV DM+ LFQ KYPS +P EEFGLV LF GL+PYQ
Sbjct: 699 QQIGFLGLQISDRGKFYTKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQG 758
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
M+H RGLTEPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+
Sbjct: 759 MIHSISSREVIVRSTRGLTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSII 810
Score = 66.6 bits (161), Expect(2) = 8e-68
Identities = 33/41 (80%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNT-ANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG + +N+ SEFCAGDPVGVLAATAMSNPAYKAV
Sbjct: 808 SIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAYKAV 848
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 261 bits (667), Expect = 1e-67
Identities = 136/188 (72%), Positives = 152/188 (80%), Gaps = 5/188 (2%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
+QKI PLL HLRASYSES+ALQ+D YLR+VKIPV F++ SSA+G LIDSKSESALSKV+
Sbjct: 638 LQKISPLLFHLRASYSESIALQIDNYLRNVKIPVTNFVK-SSAVGRLIDSKSESALSKVV 696
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLGIQ+SDKGKFY+ETLV+DMSSLFQ KYPS D P EEF LV RPLFRGLNPYQE
Sbjct: 697 QQIGFLGIQLSDKGKFYTETLVQDMSSLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQE 756
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVH-----ST 112
MVH RGLTEPGTLFKNLMAILRDVVIC+DGTVRNMCSNSI+ +T
Sbjct: 757 MVHSIASREVIVRSTRGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNT 816
Query: 111 IRVRSQHC 88
+ S+ C
Sbjct: 817 ANIASEFC 824
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV
Sbjct: 806 SIIQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 845
>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1127
Score = 213 bits (543), Expect(2) = 3e-66
Identities = 111/172 (64%), Positives = 131/172 (76%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ + LLHHLR+SY+ESV +QL+ +LR+ K+PV F+ SS +G LIDSKSESA +KV+
Sbjct: 190 IQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVV 249
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLG+QISD+GKFY TLV DM+ LFQ KYPS +P EEFGLV LF GL+PYQ
Sbjct: 250 QQIGFLGLQISDRGKFYXXTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQG 309
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
M+H RGLTEPGTLF NLMAILRDVVICYDGTVRN+ SNSI+
Sbjct: 310 MIHSISSREVIVRSTRGLTEPGTLFXNLMAILRDVVICYDGTVRNVSSNSII 361
Score = 65.1 bits (157), Expect(2) = 3e-66
Identities = 32/40 (80%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
Frame = -3
Query: 122 SIVQFEYGVNT-ANIASEFCAGDPVGVLAATAMSNPAYKA 6
SI+QFEYG + +N+ SEFCAGDPVGVLAATAMSNPAYKA
Sbjct: 359 SIIQFEYGSSGGSNLPSEFCAGDPVGVLAATAMSNPAYKA 398
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 209 bits (531), Expect(2) = 2e-62
Identities = 105/172 (61%), Positives = 133/172 (77%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ LL+HLR++Y+E V QL +RSVK+PV+ FI +SSA+G LIDSKS+SA++K++
Sbjct: 641 IQDSSDLLYHLRSTYNEFVEFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIV 700
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLG+Q+SDKG+FYS+TLV+D++SL KYPS D P E+GLV F GL+PY+
Sbjct: 701 QQIGFLGLQLSDKGRFYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEA 760
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
+VH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 761 IVHSIATREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSII 812
Score = 57.4 bits (137), Expect(2) = 2e-62
Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYGVN + F AG+PVGVLAATAMSNPAYKAV
Sbjct: 810 SIIQFEYGVNIGSRPQHLFPAGEPVGVLAATAMSNPAYKAV 850
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 210 bits (534), Expect(2) = 1e-61
Identities = 106/172 (61%), Positives = 131/172 (76%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ I PLL+HLR++Y+E V LQL+ +R K PV FI SS++G+LID KS+SA++KV+
Sbjct: 642 IQLISPLLYHLRSTYNELVELQLENQIRFAKAPVTNFILKSSSMGNLIDPKSDSAINKVV 701
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLG+QISD+GKFYS+TLV+D+S L+ KYP D P E GL+ F GL+PY+E
Sbjct: 702 QQIGFLGLQISDRGKFYSKTLVEDVSCLYTRKYPENVDYPSAEHGLIRSCFFHGLDPYEE 761
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
+VH RGLTEPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 762 IVHSISTREVIVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSII 813
Score = 53.5 bits (127), Expect(2) = 1e-61
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG +A + + AG+PVGVLAATAMSNPAYKAV
Sbjct: 811 SIIQFEYGRGSAR--NLYPAGEPVGVLAATAMSNPAYKAV 848
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 199 bits (507), Expect(2) = 7e-60
Identities = 104/173 (60%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ I PLL+ LR++Y+E V LQ++ ++R K PVA FI +SSA+G LIDSKS+S ++KV+
Sbjct: 639 IQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVV 698
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG+Q+S+KGKFYS+TLV+D++ FQ YPS D P EFGL+ F GL+PY+
Sbjct: 699 QQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYE 758
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
MVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+
Sbjct: 759 GMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSII 811
Score = 57.8 bits (138), Expect(2) = 7e-60
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QF+YG+N A +F AG+PVGVLAATAMSNPAYKAV
Sbjct: 809 SIIQFQYGLN-ARTKPQFPAGEPVGVLAATAMSNPAYKAV 847
>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao] gi|508727914|gb|EOY19811.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
3 [Theobroma cacao]
Length = 1675
Score = 199 bits (507), Expect(2) = 7e-60
Identities = 104/173 (60%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ I PLL+ LR++Y+E V LQ++ ++R K PVA FI +SSA+G LIDSKS+S ++KV+
Sbjct: 639 IQDISPLLYQLRSTYNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVV 698
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG+Q+S+KGKFYS+TLV+D++ FQ YPS D P EFGL+ F GL+PY+
Sbjct: 699 QQIGFLGLQLSNKGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYE 758
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
MVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+
Sbjct: 759 GMVHSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSII 811
Score = 57.8 bits (138), Expect(2) = 7e-60
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QF+YG+N A +F AG+PVGVLAATAMSNPAYKAV
Sbjct: 809 SIIQFQYGLN-ARTKPQFPAGEPVGVLAATAMSNPAYKAV 847
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 199 bits (507), Expect(2) = 5e-59
Identities = 102/169 (60%), Positives = 129/169 (76%)
Frame = -2
Query: 627 IFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVIQQI 448
I LL LR++Y+E +ALQL+ ++R K+PVA FI S+IG LID KS+SA++KV+QQI
Sbjct: 644 ISSLLSQLRSTYNELMALQLENHIRRAKLPVADFIVRLSSIGDLIDYKSDSAMTKVVQQI 703
Query: 447 GFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQEMVH 268
GFLG+QISD+GKFY++TLV+DM+ F+ KYPS D P + GL+ F GL+PY+EMVH
Sbjct: 704 GFLGLQISDRGKFYTKTLVEDMALHFESKYPSDIDYPSAKHGLIQSCFFHGLDPYEEMVH 763
Query: 267 XXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 764 SISAREVMVRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSII 812
Score = 55.1 bits (131), Expect(2) = 5e-59
Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNTANIA-SEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG+ A S F AG+PVGVLAATAMSNPAYKAV
Sbjct: 810 SIIQFEYGMKAGIKAQSLFPAGEPVGVLAATAMSNPAYKAV 850
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 205 bits (522), Expect(2) = 1e-58
Identities = 105/173 (60%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ + PLL+ LR++++E V LQL+ +LRSVK+P FI S++G L DSKSESA++KV+
Sbjct: 668 IQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVV 727
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG+Q+SDKG+FYS++L++D++SLF +Y S D P EFGLV F GL+PY+
Sbjct: 728 QQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYE 787
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
EMVH RGLTEPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 788 EMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSII 840
Score = 48.1 bits (113), Expect(2) = 1e-58
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 122 SIVQFEYGVNTANIA--SEFCAGDPVGVLAATAMSNPAYKAV 3
SI+Q EYG+ + S F G+PVGVLAATAMS PAYKAV
Sbjct: 838 SIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAV 879
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 205 bits (522), Expect(2) = 1e-58
Identities = 105/173 (60%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ + PLL+ LR++++E V LQL+ +LRSVK+P FI S++G L DSKSESA++KV+
Sbjct: 638 IQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVV 697
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG+Q+SDKG+FYS++L++D++SLF +Y S D P EFGLV F GL+PY+
Sbjct: 698 QQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYE 757
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
EMVH RGLTEPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 758 EMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSII 810
Score = 48.1 bits (113), Expect(2) = 1e-58
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -3
Query: 122 SIVQFEYGVNTANIA--SEFCAGDPVGVLAATAMSNPAYKAV 3
SI+Q EYG+ + S F G+PVGVLAATAMS PAYKAV
Sbjct: 808 SIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAV 849
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 191 bits (484), Expect(2) = 9e-57
Identities = 97/170 (57%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Frame = -2
Query: 627 IFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVIQQI 448
I PLL +LR++++E V LQ++ ++R VK PV +FI SSA+G+LIDSKS++A++KV+QQI
Sbjct: 647 ISPLLCNLRSTFNELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQI 706
Query: 447 GFLGIQISDKGKFYSETLVKDMSSLFQMKYP-SYDDSPYEEFGLVGRPLFRGLNPYQEMV 271
GFLG+Q+SD+GK YS+TLV+D++S F KYP + D P ++GL+ F GL+ Y+EM
Sbjct: 707 GFLGLQVSDRGKLYSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMA 766
Query: 270 HXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
H RGL+EPGTLFKNLMAILRDVVICYDGTVRN+ SNSI+
Sbjct: 767 HSISTREVIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSII 816
Score = 56.2 bits (134), Expect(2) = 9e-57
Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNTANIA-SEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYGV + S F AG+PVGVLAATAMSNPAYKAV
Sbjct: 814 SIIQFEYGVKVGTESQSLFPAGEPVGVLAATAMSNPAYKAV 854
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 180 bits (456), Expect(2) = 2e-53
Identities = 96/174 (55%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
I K+ LL+ LR+ Y+E VA QL+ ++R V++P+ F S+ +G LIDSKS+SA+ KV+
Sbjct: 642 IGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVV 701
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYE--EFGLVGRPLFRGLNPY 283
QQIGFLG Q+ D+G+FYS+ LV D++S F K YD Y E+GL+ F GL+PY
Sbjct: 702 QQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKC-CYDGDGYPSAEYGLLKGCFFNGLDPY 760
Query: 282 QEMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
+EMVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 761 EEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSII 814
Score = 55.8 bits (133), Expect(2) = 2e-53
Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG+ + + F AG+PVGVLAATAMSNPAYKAV
Sbjct: 812 SIIQFEYGIQAGDKSEHLFPAGEPVGVLAATAMSNPAYKAV 852
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 181 bits (460), Expect(2) = 5e-53
Identities = 97/174 (55%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
I K+ LLH LR+ Y+E VA QL+ +R ++ PV F S+ +G LIDSKS+SA+ KV+
Sbjct: 641 IGKVSSLLHQLRSIYNELVAQQLEKLIRDIEHPVINFALKSTKLGDLIDSKSKSAIDKVV 700
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYE--EFGLVGRPLFRGLNPY 283
QQIGFLG Q+ D+G+FYS+ LV+D++S F +K YD Y E+GL+ F GL+PY
Sbjct: 701 QQIGFLGQQLFDRGRFYSKGLVEDVASHFHVKC-CYDGDGYPSAEYGLLKGSFFNGLDPY 759
Query: 282 QEMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
+EMVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 760 EEMVHSISTREVMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSII 813
Score = 53.1 bits (126), Expect(2) = 5e-53
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG+ F AG+PVGVLAATAMSNPAYKAV
Sbjct: 811 SIIQFEYGLEKTEHL--FPAGEPVGVLAATAMSNPAYKAV 848
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 175 bits (443), Expect(2) = 8e-52
Identities = 93/174 (53%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
I K LL+ LR+ Y+E VA QL+ +++ V++P+ F S+ +G LIDSKS+S + KV+
Sbjct: 642 IGKASSLLYQLRSLYNELVAQQLEKHIQDVELPIINFALKSTKLGDLIDSKSKSTIDKVV 701
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYE--EFGLVGRPLFRGLNPY 283
QQ+GFLG Q+ D+G+FYS+ LV D++S F K YD Y E+GL+ F GL+PY
Sbjct: 702 QQVGFLGQQLFDRGRFYSKGLVDDVASHFHAKC-CYDGDGYPSAEYGLLKGCFFNGLDPY 760
Query: 282 QEMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
+EMVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+
Sbjct: 761 EEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSII 814
Score = 55.5 bits (132), Expect(2) = 8e-52
Identities = 28/41 (68%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASE-FCAGDPVGVLAATAMSNPAYKAV 3
SI+QFEYG+ + F AG+PVGVLAATAMSNPAYKAV
Sbjct: 812 SIIQFEYGIQAGDKTEHLFPAGEPVGVLAATAMSNPAYKAV 852
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 204 bits (519), Expect = 2e-50
Identities = 105/182 (57%), Positives = 137/182 (75%), Gaps = 1/182 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
++ I LL++LR+ Y+E + LQ + +LR K+PVA FI +SSA+G+LIDSKS+SA++KV+
Sbjct: 698 VEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVV 757
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG Q+S+KGKFYS TLV+ M+ LF+ KYP + D P EFGL+ F GL+PY+
Sbjct: 758 QQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYE 817
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVHSTIRVR 100
EMVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+ V+
Sbjct: 818 EMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVK 877
Query: 99 SQ 94
++
Sbjct: 878 AR 879
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 204 bits (519), Expect = 2e-50
Identities = 105/182 (57%), Positives = 137/182 (75%), Gaps = 1/182 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
++ I LL++LR+ Y+E + LQ + +LR K+PVA FI +SSA+G+LIDSKS+SA++KV+
Sbjct: 638 VEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVV 697
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
QQIGFLG Q+S+KGKFYS TLV+ M+ LF+ KYP + D P EFGL+ F GL+PY+
Sbjct: 698 QQIGFLGQQLSEKGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYE 757
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVHSTIRVR 100
EMVH RGL+EPGTLFKNLMAILRDVVICYDGTVRN+CSNSI+ V+
Sbjct: 758 EMVHSISTREIIVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVK 817
Query: 99 SQ 94
++
Sbjct: 818 AR 819
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 201 bits (510), Expect = 2e-49
Identities = 104/181 (57%), Positives = 134/181 (74%), Gaps = 1/181 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
+++I PLL H+R Y+E V +QL+ ++R VK PV+ FI +SSA+G LIDSKS+SA++KV+
Sbjct: 637 LKEISPLLFHMRTVYNELVEMQLENHIRKVKEPVSNFILNSSALGDLIDSKSDSAMNKVV 696
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPS-YDDSPYEEFGLVGRPLFRGLNPYQ 280
QQ+GFLG Q+ D+GK YS+TLV+D+SSL+Q KYPS D P EFGLV R GL+P +
Sbjct: 697 QQVGFLGRQLYDQGKLYSKTLVEDVSSLYQNKYPSDIVDYPSAEFGLVHRGFVHGLDPVE 756
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVHSTIRVR 100
M+H RGL+EPGTLFKNLMA LRDVVICYDGTVRN+CSNSI+ V+
Sbjct: 757 GMIHSIATREVIVRSSRGLSEPGTLFKNLMATLRDVVICYDGTVRNVCSNSIIQFEYGVK 816
Query: 99 S 97
S
Sbjct: 817 S 817
>ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [Amborella trichopoda]
gi|548839106|gb|ERM99420.1| hypothetical protein
AMTR_s00131p00068700 [Amborella trichopoda]
Length = 1916
Score = 170 bits (430), Expect(2) = 5e-49
Identities = 86/173 (49%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
I+ I PLL H+R++ +E + Q+ L K+P+ KFI SS++G LIDS S A++KV+
Sbjct: 648 IKSISPLLKHMRSTDNELIESQVAKSLDDAKLPIVKFILKSSSLGGLIDSSSSQAVNKVV 707
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYD-DSPYEEFGLVGRPLFRGLNPYQ 280
+QIGFLG+Q+ +GK+Y++ LV D+ S Q K+ + D P E FGL+ LF GLNPY+
Sbjct: 708 EQIGFLGLQLFSRGKYYTKDLVDDLISFIQSKHVAKGFDYPTESFGLIKSCLFHGLNPYE 767
Query: 279 EMVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIV 121
E+V+ +GL+EPG LFK+LMA+LRDVVICYDGTVRN+CSN +V
Sbjct: 768 ELVYSVSVREGSVRSSKGLSEPGILFKHLMAVLRDVVICYDGTVRNVCSNLLV 820
Score = 51.2 bits (121), Expect(2) = 5e-49
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -3
Query: 119 IVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
+VQFEYG N + AG+PVG+LAATA+SNPAY AV
Sbjct: 819 LVQFEYGGNRKTVDVSASAGEPVGILAATAVSNPAYAAV 857
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 197 bits (502), Expect = 2e-48
Identities = 99/185 (53%), Positives = 129/185 (69%)
Frame = -2
Query: 636 IQKIFPLLHHLRASYSESVALQLDTYLRSVKIPVAKFIRDSSAIGHLIDSKSESALSKVI 457
IQ + PLL LR+S++E V +Q + ++R K PV FI SSA+G +IDS+S+SA+ K++
Sbjct: 439 IQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILISSALGSMIDSRSDSAIDKIV 498
Query: 456 QQIGFLGIQISDKGKFYSETLVKDMSSLFQMKYPSYDDSPYEEFGLVGRPLFRGLNPYQE 277
QQIGFLG+Q+SD+ KFYS LV+D++SLF KYP D P EEFG V R F GL+PY+E
Sbjct: 499 QQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPSEEFGFVSRCFFHGLDPYEE 558
Query: 276 MVHXXXXXXXXXXXXRGLTEPGTLFKNLMAILRDVVICYDGTVRNMCSNSIVHSTIRVRS 97
+VH +GL EPGTLFKNLMA+LRDVVICYDGTVRN+ SNS++ V
Sbjct: 559 IVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQFEYGVGG 618
Query: 96 QHCQH 82
Q+
Sbjct: 619 MQSQN 623
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -3
Query: 122 SIVQFEYGVNTANIASEFCAGDPVGVLAATAMSNPAYKAV 3
S++QFEYGV + F AGDPVGVLAATAMSNPAYKAV
Sbjct: 608 SVIQFEYGVGGMQSQNLFPAGDPVGVLAATAMSNPAYKAV 647