BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00034898
         (1571 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42076.1| hypothetical protein MIMGU_mgv1a000356mg [Mimulus...   352   2e-94
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   192   3e-46
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   187   1e-44
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   187   1e-44
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...   182   3e-43
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   182   5e-43
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   182   5e-43
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   182   5e-43
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   171   6e-40
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   161   9e-37
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...   154   8e-35
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...   152   3e-34
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   152   5e-34
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   144   8e-32
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   144   8e-32
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma...   142   4e-31
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma...   140   1e-30
ref|XP_006296066.1| hypothetical protein CARUB_v10025216mg [Caps...   140   1e-30
ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arab...   140   1e-30
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              139   4e-30

>gb|EYU42076.1| hypothetical protein MIMGU_mgv1a000356mg [Mimulus guttatus]
          Length = 1220

 Score =  352 bits (904), Expect = 2e-94
 Identities = 221/475 (46%), Positives = 273/475 (57%), Gaps = 20/475 (4%)
 Frame = +3

Query: 207  ISDSASVEEISEEAFNIKQA--------PPL----------VLXXXXXXXXXXXXXXXXX 332
            ISDSAS+EEISEE FN KQA        PPL          V+                 
Sbjct: 23   ISDSASIEEISEEDFNAKQALQPSPPPAPPLKSSLNSSHINVVTSNNNNNNSNNSAGGGG 82

Query: 333  XRVWMMRDLYKYQIPSKPSYLGLYNLAWAQAVNNKPLGDVLVMME-GGXXXXXXXXXXXX 509
             RVW M+DLY+YQ+ SK  Y GLYNLAWAQAVNNK L +VL+M E G             
Sbjct: 83   ARVWTMKDLYEYQVASK-HYPGLYNLAWAQAVNNKSLDEVLMMKEDGNNDRSNGGISDTS 141

Query: 510  XAKTSDGDENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNKETECQXX 689
             +K+S  +++                                       NSN+++     
Sbjct: 142  SSKSSKTNDSKVVIDVEVEGGMEEGELEEGEIDLDSELVVRNMDFNVETNSNEKSR---- 197

Query: 690  XXXXXXXXXXXXMEELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQL 869
                          EL +LN ADA  S+  LCS L+ T + LQ++VLEG FAE+DTLVQL
Sbjct: 198  -------RVDSIKRELESLNVADAIISYHRLCSSLKNTIVSLQEMVLEGSFAEKDTLVQL 250

Query: 870  FMAAIQTLHTVFSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXX 1049
             + AIQTL++VFSSM+ +LK+QN  IL RLLA+VTSL+PPLFS LQL++ EAIR  +E  
Sbjct: 251  LLTAIQTLYSVFSSMSPKLKEQNKPILSRLLARVTSLKPPLFSPLQLEKAEAIRFSMESS 310

Query: 1050 XXXXXXXXATGRKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPI 1229
                      GR+ V     T DLHVLLE  ++ +  L+    E G +GS DQ+      
Sbjct: 311  VESFRNDSNNGRERV----GTADLHVLLETANTDSIDLRKCEIESGPSGSPDQT------ 360

Query: 1230 QC-SAPGLVNMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEW 1406
            +C S  GLV  R KG+  PL+DLHKDHDADSLPSPTRDLSA  PFDKG I+  GLLKPEW
Sbjct: 361  ECRSNLGLVISRHKGVTRPLIDLHKDHDADSLPSPTRDLSAPLPFDKGFIMGHGLLKPEW 420

Query: 1407 PVLRQTLPRENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDNN 1571
            PV  + + R+N ++HPYETDAV AVSSYQQKFG  SFFVND+LPSPTPSE+G  +
Sbjct: 421  PVPGRNIERDNILMHPYETDAVIAVSSYQQKFGRSSFFVNDKLPSPTPSEDGQTS 475


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  192 bits (489), Expect = 3e-46
 Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 12/292 (4%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFS 908
            E+L ++   +  KSF  +CS+L+T+ + L ++ L     + D L+QLFM A++T+++VF 
Sbjct: 157  EQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQD--KNDILIQLFMTALRTINSVFY 214

Query: 909  SMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXX---AT 1079
            SM    KQQN  IL RLL    +  P L SS QLKE++A+ L +                
Sbjct: 215  SMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQLKEVDAVILSINQSAVFSNTQDNDKVN 274

Query: 1080 GRKEV---------RQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQ 1232
            G K V         +   N N     +   D  A  +KS G +  S             +
Sbjct: 275  GIKVVELLDKKVSHKSSENANQDFTAVNKYDLGAVSIKSSGLKEQSVS----------FE 324

Query: 1233 CSAPGLVNMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPV 1412
               PGL N + KGL +PLLDLHKDHD D+LPSPTR++   FP  K      G++K + P+
Sbjct: 325  SVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQFPVAKAT-QAHGMVKLDLPI 383

Query: 1413 LRQTLPRENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDN 1568
               +L + N +LHPYETDA+KAVSSYQQKFG  S FV++ LPSPTPSEEGD+
Sbjct: 384  FAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEGDS 435



 Score = 79.0 bits (193), Expect = 6e-12
 Identities = 46/85 (54%), Positives = 51/85 (60%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPSKP 386
           ISDSASVEEISE+AFN +Q PP                     RVW MRD YKY I S+ 
Sbjct: 15  ISDSASVEEISEDAFN-RQDPPTTTKIKIASNENQNQNSTTTTRVWTMRDAYKYPI-SRD 72

Query: 387 SYLGLYNLAWAQAVNNKPLGDVLVM 461
              GLYNLAWAQAV NKPL ++ VM
Sbjct: 73  YARGLYNLAWAQAVQNKPLDELFVM 97


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum lycopersicum]
          Length = 1211

 Score =  187 bits (474), Expect = 1e-44
 Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 2/282 (0%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFS 908
            E+L ++   +  KSF  +CS+L+T+ + L ++ L     + D L+QLFM A++T+++VF 
Sbjct: 156  EQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQD--KNDILIQLFMTALRTINSVFY 213

Query: 909  SMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXX--ATG 1082
            SM    KQQN  IL RLL    +  P L SS QLKE++A+ L +                
Sbjct: 214  SMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALILSINHSLVSSNTQDNDTVN 273

Query: 1083 RKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMR 1262
               V Q  +  D H   EN +     +        S  S      +   +   PGL N +
Sbjct: 274  GINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSK 333

Query: 1263 LKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENP 1442
             KGL  PLLDLHKDHD D+LPSPTR +   FP  +      G++K + P+   +L + N 
Sbjct: 334  AKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQ----THGMVKLDLPIFPASLDKGNS 389

Query: 1443 VLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDN 1568
            +LHPYETDA+KAVSSYQQKFG  S FV++ LPSPTPSEE D+
Sbjct: 390  LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDS 431



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXX---RVWMMRDLYKYQIP 377
           ISDSASVEEISE+AFN +Q PP                        RVW MRD+YKY I 
Sbjct: 15  ISDSASVEEISEDAFN-RQDPPTTSTTSKIKIASNENQNQNSTTATRVWTMRDVYKYPI- 72

Query: 378 SKPSYLGLYNLAWAQAVNNKPLGDVLVM 461
           S+    GLYNLAWAQAV NKPL ++ VM
Sbjct: 73  SRDYARGLYNLAWAQAVQNKPLDELFVM 100


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  187 bits (474), Expect = 1e-44
 Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 2/282 (0%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFS 908
            E+L ++   +  KSF  +CS+L+T+ + L ++ L     + D L+QLFM A++T+++VF 
Sbjct: 156  EQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQD--KNDILIQLFMTALRTINSVFY 213

Query: 909  SMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXX--ATG 1082
            SM    KQQN  IL RLL    +  P L SS QLKE++A+ L +                
Sbjct: 214  SMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALILSINHSLVSSNTQDNDTVN 273

Query: 1083 RKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMR 1262
               V Q  +  D H   EN +     +        S  S      +   +   PGL N +
Sbjct: 274  GINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQSVSSESVKPGLDNSK 333

Query: 1263 LKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENP 1442
             KGL  PLLDLHKDHD D+LPSPTR +   FP  +      G++K + P+   +L + N 
Sbjct: 334  AKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQ----THGMVKLDLPIFPASLDKGNS 389

Query: 1443 VLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDN 1568
            +LHPYETDA+KAVSSYQQKFG  S FV++ LPSPTPSEE D+
Sbjct: 390  LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDS 431



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXX---RVWMMRDLYKYQIP 377
           ISDSASVEEISE+AFN +Q PP                        RVW MRD+YKY I 
Sbjct: 15  ISDSASVEEISEDAFN-RQDPPTTSTTSKIKIASNENQNQNSTTATRVWTMRDVYKYPI- 72

Query: 378 SKPSYLGLYNLAWAQAVNNKPLGDVLVM 461
           S+    GLYNLAWAQAV NKPL ++ VM
Sbjct: 73  SRDYARGLYNLAWAQAVQNKPLDELFVM 100


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis]
          Length = 1301

 Score =  182 bits (463), Expect = 3e-43
 Identities = 113/284 (39%), Positives = 164/284 (57%), Gaps = 5/284 (1%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFA--ERDTLVQLFMAAIQTLHTV 902
            E L ++N  +A+KSF+ +CSRL+ T   L+ ++ E  F+   +D ++Q+ + AIQ +++V
Sbjct: 209  ETLGSVNVVNAEKSFEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMSITAIQVVNSV 268

Query: 903  FSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATG 1082
            F SM++  K+Q    L RL   V +   PLFS  Q KE+E +   L           +  
Sbjct: 269  FCSMSVNQKEQKKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLNVLPSSGASDK 328

Query: 1083 RKEVRQGFNTNDLHVLLENTDSKAAYLKSRG-KEPGS--AGSVDQSGHTFPIQCSAPGLV 1253
             KE +     +++   L N +++ A ++    K P    A  V  +  T P +   PG +
Sbjct: 329  EKETQIIERLHEMDSNLTNANAENASIERTSVKLPQDCVASVVHSNPITLP-ELLRPGTL 387

Query: 1254 NMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPR 1433
              + +GL+LPLLDLHKDHDADSLPSPTR+  + FP  K L +  G++KP     +     
Sbjct: 388  AFKGRGLLLPLLDLHKDHDADSLPSPTREAPSCFPVYKPLGVADGIIKPVSTTAKVAPGA 447

Query: 1434 ENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGD 1565
            E   LH YETDA+KAVS+YQQKFG GSF ++D LPSPTPSEE D
Sbjct: 448  EESRLHRYETDALKAVSTYQQKFGRGSFLMSDRLPSPTPSEECD 491



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXX-RVWMMRDLYKYQIPSK 383
           ISDSASVEEISEE FN ++                         RVW MRDLY      +
Sbjct: 18  ISDSASVEEISEEDFNKQEGNGTGSGKVMSVSDSNSKESKFGDSRVWTMRDLYANYPGFR 77

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GLYNLAWAQAV NKPL ++ VM
Sbjct: 78  GYTTGLYNLAWAQAVQNKPLNEIFVM 103


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  182 bits (461), Expect = 5e-43
 Identities = 112/269 (41%), Positives = 156/269 (57%), Gaps = 1/269 (0%)
 Frame = +3

Query: 768  SFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSMTLRLKQQNGAI 947
            SF+ +CS+LE T   L+++V E     +D L+QL  +A+Q++H+VF SM   LK+QN  I
Sbjct: 192  SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251

Query: 948  LLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEVRQGFNTNDLHV 1127
            L RLL+ + S  PPLFSS Q+KEMEA+   L                    G N  D ++
Sbjct: 252  LSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDML-----AMHGVNGKDSNI 306

Query: 1128 LLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGLVLPLLDLHKDH 1307
            + EN  +    L  + K P    S+ Q+    P++ S PG    R +G++LPLLD HK H
Sbjct: 307  VTENAVND---LNFKEKVPLPVDSLMQNK---PLEASKPGPPGYRSRGVLLPLLDPHKVH 360

Query: 1308 DADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHPYETDAVKAVSS 1487
            D DSLPSPTR+ + + P  + L++  G++K      + +   E      YETDA++A SS
Sbjct: 361  DVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSS 420

Query: 1488 YQQKFGGGSFFVNDELPSPTPSEE-GDNN 1571
            YQQKFG  SFF+N ELPSPTPSEE GD +
Sbjct: 421  YQQKFGRNSFFMNSELPSPTPSEESGDGD 449



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLY-KYQIPSK 383
           ISD+ASVEEISEE F IKQ    V+                  RVW MRDLY KY    +
Sbjct: 10  ISDTASVEEISEEDFKIKQEE--VVKVVKETKPIKVGGGEAAARVWTMRDLYNKYPAICR 67

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GL+NLAWAQAV NKPL ++ VM
Sbjct: 68  GYGPGLHNLAWAQAVQNKPLNEIFVM 93


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|557541054|gb|ESR52098.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  182 bits (461), Expect = 5e-43
 Identities = 112/269 (41%), Positives = 156/269 (57%), Gaps = 1/269 (0%)
 Frame = +3

Query: 768  SFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSMTLRLKQQNGAI 947
            SF+ +CS+LE T   L+++V E     +D L+QL  +A+Q++H+VF SM   LK+QN  I
Sbjct: 192  SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251

Query: 948  LLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEVRQGFNTNDLHV 1127
            L RLL+ + S  PPLFSS Q+KEMEA+   L                    G N  D ++
Sbjct: 252  LSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDML-----AMHGVNGKDSNI 306

Query: 1128 LLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGLVLPLLDLHKDH 1307
            + EN  +    L  + K P    S+ Q+    P++ S PG    R +G++LPLLD HK H
Sbjct: 307  VTENAVND---LNFKEKVPLPVDSLMQNK---PLEASKPGPPGYRSRGVLLPLLDPHKVH 360

Query: 1308 DADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHPYETDAVKAVSS 1487
            D DSLPSPTR+ + + P  + L++  G++K      + +   E      YETDA++A SS
Sbjct: 361  DVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSS 420

Query: 1488 YQQKFGGGSFFVNDELPSPTPSEE-GDNN 1571
            YQQKFG  SFF+N ELPSPTPSEE GD +
Sbjct: 421  YQQKFGRNSFFMNSELPSPTPSEESGDGD 449



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLY-KYQIPSK 383
           ISD+ASVEEISEE F IKQ    V+                  RVW MRDLY KY    +
Sbjct: 10  ISDTASVEEISEEDFKIKQEE--VVKVVKETKPIKVGGGEAAARVWTMRDLYNKYPAICR 67

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GL+NLAWAQAV NKPL ++ VM
Sbjct: 68  GYGPGLHNLAWAQAVQNKPLNEIFVM 93


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|567892677|ref|XP_006438859.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541053|gb|ESR52097.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541055|gb|ESR52099.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  182 bits (461), Expect = 5e-43
 Identities = 112/269 (41%), Positives = 156/269 (57%), Gaps = 1/269 (0%)
 Frame = +3

Query: 768  SFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSMTLRLKQQNGAI 947
            SF+ +CS+LE T   L+++V E     +D L+QL  +A+Q++H+VF SM   LK+QN  I
Sbjct: 192  SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251

Query: 948  LLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEVRQGFNTNDLHV 1127
            L RLL+ + S  PPLFSS Q+KEMEA+   L                    G N  D ++
Sbjct: 252  LSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDML-----AMHGVNGKDSNI 306

Query: 1128 LLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGLVLPLLDLHKDH 1307
            + EN  +    L  + K P    S+ Q+    P++ S PG    R +G++LPLLD HK H
Sbjct: 307  VTENAVND---LNFKEKVPLPVDSLMQNK---PLEASKPGPPGYRSRGVLLPLLDPHKVH 360

Query: 1308 DADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHPYETDAVKAVSS 1487
            D DSLPSPTR+ + + P  + L++  G++K      + +   E      YETDA++A SS
Sbjct: 361  DVDSLPSPTRETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSS 420

Query: 1488 YQQKFGGGSFFVNDELPSPTPSEE-GDNN 1571
            YQQKFG  SFF+N ELPSPTPSEE GD +
Sbjct: 421  YQQKFGRNSFFMNSELPSPTPSEESGDGD 449



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLY-KYQIPSK 383
           ISD+ASVEEISEE F IKQ    V+                  RVW MRDLY KY    +
Sbjct: 10  ISDTASVEEISEEDFKIKQEE--VVKVVKETKPIKVGGGEAAARVWTMRDLYNKYPAICR 67

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GL+NLAWAQAV NKPL ++ VM
Sbjct: 68  GYGPGLHNLAWAQAVQNKPLNEIFVM 93


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  171 bits (434), Expect = 6e-40
 Identities = 112/283 (39%), Positives = 151/283 (53%), Gaps = 5/283 (1%)
 Frame = +3

Query: 735  LVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSM 914
            L  +   +A+KSF+ +CSRL      L+ ++LE     +D L+QL   AI   ++ F ++
Sbjct: 224  LEGVTVIEAEKSFEGVCSRLHNALESLRALILECSVPAKDALIQLAFGAI---NSAFVAL 280

Query: 915  TLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEV 1094
                K+QN AIL RLL+ V    P LF   ++KE++ + + L                +V
Sbjct: 281  NCNSKEQNVAILSRLLSIVKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDM---KV 337

Query: 1095 RQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGL 1274
              G N  D   L EN       L    K P SA  V  +      +   PG+ N R +G+
Sbjct: 338  VDGVNKKDPDALPENICHD---LTVTNKLPSSAKFVINNKPNALTETLKPGVPNFRNRGI 394

Query: 1275 VLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHP 1454
             LPLLDLHKDHDADSLPSPTR+ +   P +K L     ++K  +   + +   E   LHP
Sbjct: 395  SLPLLDLHKDHDADSLPSPTRETTPCLPVNKPLTSGDVMVKSGFMTGKGSHDAEGDKLHP 454

Query: 1455 YETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEE-----GDN 1568
            YETDA+KA S+YQQKFG GSFF +D LPSPTPSEE     GDN
Sbjct: 455  YETDALKAFSTYQQKFGQGSFFSSDRLPSPTPSEESGDEGGDN 497



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 38/84 (45%), Positives = 44/84 (52%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPSKP 386
           ISDSAS+EEISEE FN +    L                    RVW M+DL KY    + 
Sbjct: 39  ISDSASIEEISEEDFNKQDVKIL-----KESKSSKGGEANSNSRVWTMQDLCKYPSVIRG 93

Query: 387 SYLGLYNLAWAQAVNNKPLGDVLV 458
              GLYN AWAQAV NKPL ++ V
Sbjct: 94  YASGLYNFAWAQAVQNKPLNEIFV 117


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  161 bits (407), Expect = 9e-37
 Identities = 104/282 (36%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVL--EGPFAERDTLVQLFMAAIQTLHTV 902
            E+L +++     KSF+A+C +L      L+++V   E  F  +D+LV+L   AI  +++ 
Sbjct: 184  EDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFTAIGAVNSF 243

Query: 903  FSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATG 1082
            FSSM  +LK+QN  + +R L+ V S  P  FS    KE+     C               
Sbjct: 244  FSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV-----C--------------- 283

Query: 1083 RKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMR 1262
                   F   D  ++     S    L +  + P +A S   +   F I+   PG+ + +
Sbjct: 284  ------DFCNFDFRIV-----SLCYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVPSFK 332

Query: 1263 LKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENP 1442
             +G++LPLLDL K HD DSLPSPTR+ + +FP  + L +  G++    PV +     E P
Sbjct: 333  SRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASITEEP 392

Query: 1443 VLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDN 1568
             +HPYETDA+KAVSSYQ+KF   SFF N ELPSPTPSEE  N
Sbjct: 393  RVHPYETDALKAVSSYQKKFNLNSFFTN-ELPSPTPSEESGN 433



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPSKP 386
           ISD+ASVEEISE+ FN ++    V+                  +VW +RDLYKYQ+    
Sbjct: 25  ISDTASVEEISEDDFNKQE----VVVVKETPSSTTNNNSSSKQKVWTVRDLYKYQVGG-- 78

Query: 387 SYL-GLYNLAWAQAVNNKPLGDVLVMME 467
            Y+ GLYNLAWAQAV NKPL ++ V +E
Sbjct: 79  GYMSGLYNLAWAQAVQNKPLNELFVEVE 106


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score =  154 bits (390), Expect = 8e-35
 Identities = 106/286 (37%), Positives = 149/286 (52%), Gaps = 6/286 (2%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFS 908
            E L +L   +A+KSF  +C R   +   L+ ++ E   + ++ LVQ    A++ + +VF 
Sbjct: 171  EALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAVRAISSVFR 230

Query: 909  SMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRK 1088
            SM+   K+QN  +L R+L+   S  P  F + QLKE+E +   ++            G K
Sbjct: 231  SMSADQKEQNKDVLSRILSSAKS-DPSPFPAEQLKEIEVMSSSMDSPQTK------AGTK 283

Query: 1089 E----VRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVN 1256
            E       G    D      N      Y  + G +  +  SV  S      +    G  +
Sbjct: 284  ENGIQCINGVYKTDSDTSGANASHVFTYAANTGSD--TQVSVVHSNPNISSEVPRSGSSS 341

Query: 1257 MRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPE-WPVLRQTLPR 1433
             + +GL+LPLLDLH DHD DSLPSPTR+  A FP  K +++E G++K   W   R  L  
Sbjct: 342  FKGRGLMLPLLDLHMDHDEDSLPSPTREPPACFPAQKPVVVENGMVKKSGWETARAALDV 401

Query: 1434 ENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPS-EEGDN 1568
            E   +H YET+A+KAVSSYQQKF   S F+  ELPSPTPS EEGDN
Sbjct: 402  EGSKMHVYETEALKAVSSYQQKFSRNS-FLTSELPSPTPSEEEGDN 446


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
            gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
            3 [Populus trichocarpa]
          Length = 1190

 Score =  152 bits (385), Expect = 3e-34
 Identities = 101/282 (35%), Positives = 151/282 (53%), Gaps = 2/282 (0%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKIV--LEGPFAERDTLVQLFMAAIQTLHTV 902
            ++L +++  + +KSF+A+C +L      L+++V   +  F  +D LVQL   AI+ +++V
Sbjct: 153  KDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLLFMAIRVVNSV 212

Query: 903  FSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATG 1082
            F SM  +LK+QN  +  R  + + S  PP FS  Q KE+      L           A  
Sbjct: 213  FCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV------LNENHNDSLAKTA-- 264

Query: 1083 RKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMR 1262
                  G+   DL  + E   +   +++++  +   A                PG+ + +
Sbjct: 265  ------GY---DLTTMSEKLPAAETFVQNKPNKSIEAPK-------------PPGVPSFK 302

Query: 1263 LKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENP 1442
             +G++LPLLDL K HD DSLPSPT++ +  FP  + L +  G++    PV + T   E P
Sbjct: 303  SRGVLLPLLDLKKYHDEDSLPSPTQE-TTPFPVQRLLAIGDGMVSSGLPVPKVTPVAEEP 361

Query: 1443 VLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEEGDN 1568
             +HPYETDA+KAVSSYQQKF   SFF N ELPSPTPSEE  N
Sbjct: 362  RMHPYETDALKAVSSYQQKFNRNSFFTN-ELPSPTPSEESGN 402



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPSKP 386
           ISD+ASVEEISEE FN KQ   +V                   +VW +RDLYKYQ+    
Sbjct: 23  ISDTASVEEISEEDFN-KQEVVIV--------KETPSSNNSSQKVWTVRDLYKYQVGG-- 71

Query: 387 SYL-GLYNLAWAQAVNNKPLGDVLVMME 467
            Y+ GLYNLAWA+AV NKPL ++ V+++
Sbjct: 72  GYMSGLYNLAWARAVQNKPLNELTVVID 99


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  152 bits (383), Expect = 5e-34
 Identities = 105/284 (36%), Positives = 148/284 (52%), Gaps = 7/284 (2%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKI-----VLEGPFAERDTLVQLFMAAIQTL 893
            E+L ++   +A+KSF  +CSRL+ T   LQK+     V E     +D L Q  + AI+ L
Sbjct: 191  EDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRAL 250

Query: 894  HTVFSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXX 1073
            + VF SM    K+ N  +  RLL+ V     P+FS   +KE+E +   L+          
Sbjct: 251  NHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEA 310

Query: 1074 ATGRKEVR--QGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPG 1247
            +    +V+   G N N L   +E++    A  K    +  S  S +Q+          PG
Sbjct: 311  SDKVNDVQVTDGMNRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNP----DALKPG 366

Query: 1248 LVNMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTL 1427
            L + R + +  PLLDLHKDHD DSLPSPT      FP +K  ++          V  +T 
Sbjct: 367  LSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSELVTA-------KVAHET- 418

Query: 1428 PRENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEE 1559
              ++ ++HPYETDA+KAVS+YQQKFG  SF   D+LPSPTPSEE
Sbjct: 419  --QDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEE 460



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 43/88 (48%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDL---YKYQIP 377
           ISDSASVEEISEE FN ++   L                    RVW MRDL   YKY   
Sbjct: 20  ISDSASVEEISEEDFNKQEVRVL-----------REAKPKADTRVWTMRDLQDLYKYHQA 68

Query: 378 SKPSYLGLYNLAWAQAVNNKPLGDVLVM 461
                  LYNLAWAQAV NKPL D+ VM
Sbjct: 69  CSGYTPRLYNLAWAQAVQNKPLNDIFVM 96


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  144 bits (364), Expect = 8e-32
 Identities = 93/271 (34%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
 Frame = +3

Query: 759  AQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSMTLRLKQQN 938
            AQKSF  +CS++ ++     +++       +D L+Q   AA++ +++VF SM L  K+++
Sbjct: 213  AQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEH 272

Query: 939  GAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEVR--QGFNT 1112
               L RLL+ V +  PPLFS  Q+K +E      +          +    E+    G   
Sbjct: 273  KEHLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKD 332

Query: 1113 NDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGLVLPLLD 1292
             D +    +T S+         +    G   ++      +    G+ +++ +G +LPLLD
Sbjct: 333  MDFYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLD 392

Query: 1293 LHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHPYETDAV 1472
            LHKDHDADSLPSPTR+    F   K             P  +   P +    HPYETDA+
Sbjct: 393  LHKDHDADSLPSPTREAPTIFSVQKS---------GNAPT-KMAFPVDGSRSHPYETDAL 442

Query: 1473 KAVSSYQQKFGGGSFFVNDELPSPTPSEEGD 1565
            KAVS+YQQKFG  SF + D LPSPTPSEE D
Sbjct: 443  KAVSTYQQKFGRSSFSMADRLPSPTPSEEHD 473



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 44/88 (50%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNI--KQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPS 380
           ISD+ASVEEISEE FN     A P V+                  RVW M DLYK     
Sbjct: 17  ISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRET--------RVWTMSDLYKNYPAM 68

Query: 381 KPSYL-GLYNLAWAQAVNNKPLGDVLVM 461
           +  Y  GLYNLAWAQAV NKPL D+ VM
Sbjct: 69  RHGYASGLYNLAWAQAVQNKPLNDIFVM 96


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score =  144 bits (364), Expect = 8e-32
 Identities = 93/271 (34%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
 Frame = +3

Query: 759  AQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSMTLRLKQQN 938
            AQKSF  +CS++ ++     +++       +D L+Q   AA++ +++VF SM L  K+++
Sbjct: 213  AQKSFQEVCSQIHSSIETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEH 272

Query: 939  GAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKEVR--QGFNT 1112
               L RLL+ V +  PPLFS  Q+K +E      +          +    E+    G   
Sbjct: 273  KEHLSRLLSYVKNCDPPLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKD 332

Query: 1113 NDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKGLVLPLLD 1292
             D +    +T S+         +    G   ++      +    G+ +++ +G +LPLLD
Sbjct: 333  MDFYSAYTSTSSQLTPSNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLD 392

Query: 1293 LHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLHPYETDAV 1472
            LHKDHDADSLPSPTR+    F   K             P  +   P +    HPYETDA+
Sbjct: 393  LHKDHDADSLPSPTREAPTIFSVQKS---------GNAPT-KMAFPVDGSRSHPYETDAL 442

Query: 1473 KAVSSYQQKFGGGSFFVNDELPSPTPSEEGD 1565
            KAVS+YQQKFG  SF + D LPSPTPSEE D
Sbjct: 443  KAVSTYQQKFGRSSFSMADRLPSPTPSEEHD 473



 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 44/88 (50%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNI--KQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLYKYQIPS 380
           ISD+ASVEEISEE FN     A P V+                  RVW M DLYK     
Sbjct: 17  ISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRET--------RVWTMSDLYKNYPAM 68

Query: 381 KPSYL-GLYNLAWAQAVNNKPLGDVLVM 461
           +  Y  GLYNLAWAQAV NKPL D+ VM
Sbjct: 69  RHGYASGLYNLAWAQAVQNKPLNDIFVM 96


>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1257

 Score =  142 bits (358), Expect = 4e-31
 Identities = 101/281 (35%), Positives = 150/281 (53%), Gaps = 8/281 (2%)
 Frame = +3

Query: 735  LVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSM 914
            L  +  A+  +SF   CS+L+     L +++     +ERD LV+L   A + +++VF SM
Sbjct: 195  LEGVTVANVAESFAQTCSKLQNA---LPEVLSRPADSERDDLVRLSFNATEVVYSVFCSM 251

Query: 915  TLRLKQQNGAILLRLLAQVTSLRPP-LFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKE 1091
                K+QN   +LRLL+ V   +   LFS   +KE++ +   ++              KE
Sbjct: 252  DSLKKEQNKDSILRLLSFVKDQQQAQLFSPEHIKEIQGMMTAIDYFGALVNSEAIGKEKE 311

Query: 1092 VRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKG 1271
            ++    T+++    EN   +AA L S  K   S   +  + H         G  +++ +G
Sbjct: 312  LQTTVQTHEIKTQ-ENQAVEAAELISYNKPLHS--DIIGASHALKF-----GQNSIKGRG 363

Query: 1272 LVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLL-------KPEWPVLRQTLP 1430
            ++LPLLDLHKDHDADSLPSPTR+  + FP +K L + + ++       KPE    +  L 
Sbjct: 364  VLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGEPMVSSGSAAAKPESG--KMELD 421

Query: 1431 RENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPS 1553
             E    H YETDA+KAVS+YQQKFG  S F ND+ PSPTPS
Sbjct: 422  SEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPTPS 462



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 40/86 (46%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLY-KYQIPSK 383
           ISD+ASVEEIS E FN +    L                    RVW + DLY KY    +
Sbjct: 30  ISDTASVEEISAEDFNKQDVKVL---------NNNNKPNGSDARVWAVHDLYSKYPTICR 80

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GLYNLAWAQAV NKPL D+ VM
Sbjct: 81  GYASGLYNLAWAQAVQNKPLNDIFVM 106


>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1261

 Score =  140 bits (354), Expect = 1e-30
 Identities = 94/282 (33%), Positives = 152/282 (53%), Gaps = 9/282 (3%)
 Frame = +3

Query: 735  LVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGPFAERDTLVQLFMAAIQTLHTVFSSM 914
            L  +  A+  +SF   CS+L+ T   L +++     +E+D LV+L   A + +++VF SM
Sbjct: 193  LEGVTVANVVESFAQTCSKLQNT---LPEVLSRPAGSEKDDLVRLSFNATEVVYSVFCSM 249

Query: 915  TLRLKQQNGAILLRLLAQVTSLRPP-LFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKE 1091
                K+QN   +LRLL+ V   +   LFS   +KE++ +   ++              KE
Sbjct: 250  DSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEIQGMMTAIDSVGALVNSEAIGKEKE 309

Query: 1092 VRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPI--------QCSAPG 1247
            ++    T ++    EN+  +    + + +E  +  + +   ++ P+        Q    G
Sbjct: 310  LQ----TTEIKTQ-ENSAVEVQIHEIKTQENQAVEAAELISYSKPLHRDITGTSQALKFG 364

Query: 1248 LVNMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTL 1427
              +++ +G++LPLLDLHKDHDADSLPSPTR+  + FP +K L + + +++      +  L
Sbjct: 365  QNSIKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGESMVRSGSASAKMEL 424

Query: 1428 PRENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPS 1553
              E    H YETDA+KAVS+YQQKFG  S F ND+ PSPTPS
Sbjct: 425  DSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPSPTPS 466



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 42/86 (48%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDLY-KYQIPSK 383
           ISD+ASVEEIS E FN KQ   L+                   RVW + DLY KY    +
Sbjct: 30  ISDTASVEEISAEDFN-KQDVKLL--------NNNNKPNGSDARVWAVHDLYSKYPTICR 80

Query: 384 PSYLGLYNLAWAQAVNNKPLGDVLVM 461
               GLYNLAWAQAV NKPL D+ VM
Sbjct: 81  GYASGLYNLAWAQAVQNKPLNDIFVM 106


>ref|XP_006296066.1| hypothetical protein CARUB_v10025216mg [Capsella rubella]
            gi|482564774|gb|EOA28964.1| hypothetical protein
            CARUB_v10025216mg [Capsella rubella]
          Length = 1242

 Score =  140 bits (354), Expect = 1e-30
 Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
 Frame = +3

Query: 735  LVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGP-FAERDTLVQLFMAAIQTLHTVFSS 911
            L + +  +AQ +F+ +CS+L      L+++V     F +RDTLVQL  A++QT+++VF S
Sbjct: 196  LESTSLVEAQTAFEGVCSKLLGALESLRELVSNNDDFPKRDTLVQLSFASLQTINSVFCS 255

Query: 912  MTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKE 1091
            +    K+ N   + RLL  V        SS Q  E+EA+   L           ++G   
Sbjct: 256  LNNFSKELNKETMSRLLTLVNDHFSRFLSSNQKNEIEAMNQNLSRSAIASYAATSSGDNV 315

Query: 1092 VRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKG 1271
             R    +N            A  L S G   G++ +                    R + 
Sbjct: 316  TRMTQTSN-------GDSFFAKRLSSEGTHRGASYA--------------------RSRL 348

Query: 1272 LVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLH 1451
             +LPLLDLHKDHDADSLPSPTR+ +   P +    +   ++KP +PV R++   E   ++
Sbjct: 349  PMLPLLDLHKDHDADSLPSPTRETTPILPVN----VRHTMVKPGFPVSRESQITEGAKVY 404

Query: 1452 PYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPS-EEGDNN 1571
            PYE+DA+KAVS+YQ+KFG  S F  D+LPSPTPS E  D N
Sbjct: 405  PYESDALKAVSTYQKKFGLNSVFKTDDLPSPTPSGEPSDGN 445


>ref|XP_002881287.1| hypothetical protein ARALYDRAFT_482300 [Arabidopsis lyrata subsp.
            lyrata] gi|297327126|gb|EFH57546.1| hypothetical protein
            ARALYDRAFT_482300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score =  140 bits (354), Expect = 1e-30
 Identities = 102/281 (36%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
 Frame = +3

Query: 735  LVNLNAADAQKSFDALCSRLETTAIKLQKIVLEGP-FAERDTLVQLFMAAIQTLHTVFSS 911
            L + +  +AQ  F+ +CSR+      L+++V +   F +RDTLVQL  A++QT+++VF S
Sbjct: 198  LESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLSFASLQTINSVFCS 257

Query: 912  MTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXXATGRKE 1091
            +    K++N   + RLL  V        SS Q  E+EA+   L            T  +E
Sbjct: 258  LNNVSKERNKETMSRLLTLVNDHFSRFLSSNQKNEIEAMNQDLSRSAIAVYT--GTSSEE 315

Query: 1092 VRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLVNMRLKG 1271
                 N N +          A  L S G   G++                   V  RL  
Sbjct: 316  -----NVNRMTQPSNGDSFLAKKLSSEGTHRGAS------------------YVRSRLP- 351

Query: 1272 LVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPRENPVLH 1451
             +LPLLDLHKDHDADSLPSPTR+ + + P +        ++KP +PV R++   E   ++
Sbjct: 352  -MLPLLDLHKDHDADSLPSPTRETTPSLPVNG----RHTMVKPGFPVGRESQTTEGAKVY 406

Query: 1452 PYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPS-EEGDNN 1571
            PYE+DA+KAVS+Y QKFG  S F  D+LPSPTPS E  D N
Sbjct: 407  PYESDALKAVSTYHQKFGLNSVFKTDDLPSPTPSGEPNDGN 447


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  139 bits (350), Expect = 4e-30
 Identities = 101/282 (35%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
 Frame = +3

Query: 729  EELVNLNAADAQKSFDALCSRLETTAIKLQKI-----VLEGPFAERDTLVQLFMAAIQTL 893
            E+L ++   +A+KSF  +CSRL+ T   LQK+     V E     +D L Q  + AI+ L
Sbjct: 202  EDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRAL 261

Query: 894  HTVFSSMTLRLKQQNGAILLRLLAQVTSLRPPLFSSLQLKEMEAIRLCLEXXXXXXXXXX 1073
            + VF SM    K+ N  +  RLL+ V     P+FS   +KE+E +   L+          
Sbjct: 262  NHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTP-------- 313

Query: 1074 ATGRKEVRQGFNTNDLHVLLENTDSKAAYLKSRGKEPGSAGSVDQSGHTFPIQCSAPGLV 1253
               +         ND+ V    TD     +           SV+ SG  F          
Sbjct: 314  -AAQSSAEASDKVNDVQV----TDGMNRNILD--------SSVESSGRAFA------SAK 354

Query: 1254 NMRLKGLVLPLLDLHKDHDADSLPSPTRDLSATFPFDKGLILEQGLLKPEWPVLRQTLPR 1433
              R + +  PLLDLHKDHD DSLPSPT      FP +K  ++          V  +T   
Sbjct: 355  KFRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNKSELVTA-------KVAHET--- 404

Query: 1434 ENPVLHPYETDAVKAVSSYQQKFGGGSFFVNDELPSPTPSEE 1559
            ++ ++HPYETDA+KAVS+YQQKFG  SF   D+LPSPTPSEE
Sbjct: 405  QDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEE 446



 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 42/90 (46%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = +3

Query: 207 ISDSASVEEISEEAFNIKQAPPLVLXXXXXXXXXXXXXXXXXXRVWMMRDL---YKYQIP 377
           ISDSASVEEISEE FN ++   L                    RVW MRDL   YKY   
Sbjct: 60  ISDSASVEEISEEDFNKQEVRVL-----------REAKPKADTRVWTMRDLQDLYKYHQA 108

Query: 378 SKPSYLGLYNLAWAQAVNNKPLGDVLVMME 467
                  LYNLAWAQAV NKPL D+ V+++
Sbjct: 109 CSGYTPRLYNLAWAQAVQNKPLNDIFVIID 138