BLASTX nr result

ID: Mentha23_contig00034616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00034616
         (805 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361257.1| PREDICTED: putative F-box protein At1g49610-...    60   1e-06
ref|XP_006361256.1| PREDICTED: putative F-box protein At1g49610-...    60   1e-06

>ref|XP_006361257.1| PREDICTED: putative F-box protein At1g49610-like isoform X2
           [Solanum tuberosum]
          Length = 385

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   SSIRKLTLSYIKLRIPG--NVQLSQLTSLTVEDSKSLSELGMTRLLSGAPVLEELVLLDM 176
           SS+R L L Y KL++    NV  S L SL+V   K L+E  M ++LSG P LE L LLD 
Sbjct: 147 SSMRNLNLQYCKLKLEPSVNVNWSNLVSLSVGYVK-LTERVMGKILSGCPNLECL-LLDF 204

Query: 177 EIGED-YNIRSESLKKLIINTFLSSELRIW----APNLSNIDIGGYA 302
             G D   I +  LKKL IN++ +SE  +W    AP++ N+++ GY+
Sbjct: 205 IWGFDRLEISNVKLKKLTINSYETSECDVWLEILAPHIQNLELLGYS 251


>ref|XP_006361256.1| PREDICTED: putative F-box protein At1g49610-like isoform X1
           [Solanum tuberosum]
          Length = 484

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
 Frame = +3

Query: 3   SSIRKLTLSYIKLRIPG--NVQLSQLTSLTVEDSKSLSELGMTRLLSGAPVLEELVLLDM 176
           SS+R L L Y KL++    NV  S L SL+V   K L+E  M ++LSG P LE L LLD 
Sbjct: 147 SSMRNLNLQYCKLKLEPSVNVNWSNLVSLSVGYVK-LTERVMGKILSGCPNLECL-LLDF 204

Query: 177 EIGED-YNIRSESLKKLIINTFLSSELRIW----APNLSNIDIGGYA 302
             G D   I +  LKKL IN++ +SE  +W    AP++ N+++ GY+
Sbjct: 205 IWGFDRLEISNVKLKKLTINSYETSECDVWLEILAPHIQNLELLGYS 251


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