BLASTX nr result
ID: Mentha23_contig00034610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00034610
(363 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 108 6e-22
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 108 1e-21
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer... 93 3e-17
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 93 3e-17
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 92 7e-17
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 92 7e-17
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 92 7e-17
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 85 1e-14
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas... 83 3e-14
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer... 77 3e-12
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 77 3e-12
gb|EYU27089.1| hypothetical protein MIMGU_mgv1a0004242mg, partia... 76 6e-12
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera] 75 1e-11
gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlise... 73 4e-11
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 68 1e-09
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr... 67 2e-09
ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr... 67 3e-09
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 65 1e-08
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub... 63 4e-08
ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, part... 63 4e-08
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 108 bits (271), Expect = 6e-22
Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = -2
Query: 251 GEVKEEKIGRQSW-RPHLAEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFD 75
GE K + G ++ RPHL EKDY L+E+F HHI+SFDYM++ GL+TM+ NIKP+E+ D
Sbjct: 2 GEEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVD 61
Query: 74 SFSKLKLRIWITNPEIFTPQKERS 3
SFS LKLRIW PE+F PQKER+
Sbjct: 62 SFSSLKLRIWFGKPELFPPQKERA 85
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 108 bits (269), Expect = 1e-21
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = -2
Query: 239 EEKIGRQSWRPHLAEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKL 60
EE+ + RPHL EKDY L+E+F HHI+SFDYM++ GL+TM+ NIKP+E+ DSFS L
Sbjct: 2 EEEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSL 61
Query: 59 KLRIWITNPEIFTPQKERS 3
KLRIW PE+F PQKER+
Sbjct: 62 KLRIWFGKPELFPPQKERA 80
>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
RPA2-like, partial [Cucumis sativus]
Length = 948
Score = 93.2 bits (230), Expect = 3e-17
Identities = 38/65 (58%), Positives = 55/65 (84%)
Frame = -2
Query: 197 EEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTP 18
E +DY LRE+FRHHI+SFD++++ GL+T+M +IKPVE++DSF+ KLRIW+ PE++ P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 17 QKERS 3
QKER+
Sbjct: 67 QKERN 71
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 93.2 bits (230), Expect = 3e-17
Identities = 38/65 (58%), Positives = 55/65 (84%)
Frame = -2
Query: 197 EEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTP 18
E +DY LRE+FRHHI+SFD++++ GL+T+M +IKPVE++DSF+ KLRIW+ PE++ P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 17 QKERS 3
QKER+
Sbjct: 67 QKERN 71
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Glycine max]
Length = 1151
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ LRE+F+HHI+SFDYM++ GLDTM+ +IKPVEVFD F+ KLRIW+ NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 92.0 bits (227), Expect = 7e-17
Identities = 38/61 (62%), Positives = 51/61 (83%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ LRE+F+HHI+SFDYM + GL+TM+R+IKP+EVFD F+ KLRIW+ NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X1 [Glycine max]
Length = 1175
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ LRE+F+HHI+SFDYM++ GLDTM+ +IKPVEVFD F+ KLRIW+ NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 84.7 bits (208), Expect = 1e-14
Identities = 33/66 (50%), Positives = 53/66 (80%)
Frame = -2
Query: 200 AEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFT 21
++ ++ L+E+F+HHI+SFDYM++ GLD M++ +KPV++FDS S LRIW+ +PE++
Sbjct: 13 SDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYP 72
Query: 20 PQKERS 3
PQK+RS
Sbjct: 73 PQKDRS 78
>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
gi|561006696|gb|ESW05690.1| hypothetical protein
PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 83.2 bits (204), Expect = 3e-14
Identities = 34/61 (55%), Positives = 49/61 (80%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ LRE+F+HHI+SFD+M++ GL+T + +IKP+EV D F+ KLRIW+ NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Citrus sinensis]
Length = 954
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ PLRE+ RHHI+SFDYML+ GL M ++K V V DSF+ +L+I + NPEIF PQKE
Sbjct: 8 DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67
Query: 8 R 6
+
Sbjct: 68 Q 68
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQKE 9
D+ PLRE+ RHHI+SFDYML+ GL M ++K V V DSF+ +L+I + NPEIF PQKE
Sbjct: 8 DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67
Query: 8 R 6
+
Sbjct: 68 Q 68
>gb|EYU27089.1| hypothetical protein MIMGU_mgv1a0004242mg, partial [Mimulus
guttatus]
Length = 133
Score = 75.9 bits (185), Expect = 6e-12
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -2
Query: 284 IVAQFSMAASSGEVKEEKIGRQSWRPHLAEEKDYGPLREIFRHHIDSFDYMLEYGLDTMM 105
+ A+ +++ + ++ ++SW PHL +EKDY LREIF+HHIDSFDYM+E+G + MM
Sbjct: 1 MAARKDISSQAAAASKDSNTKKSWSPHLDKEKDYEALREIFKHHIDSFDYMVEHGFEKMM 60
Query: 104 RNIKPVE 84
+KPVE
Sbjct: 61 LGLKPVE 67
>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
Length = 416
Score = 74.7 bits (182), Expect = 1e-11
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVF-----DSFSKLKLRIWITNPEIF 24
DY PLRE+F+HHIDSFD+++E+GL+T++ ++KPVE F ++ +W PE++
Sbjct: 7 DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPELY 66
Query: 23 TPQKERS 3
PQKERS
Sbjct: 67 PPQKERS 73
>gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlisea aurea]
Length = 1144
Score = 73.2 bits (178), Expect = 4e-11
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -2
Query: 221 QSWRPHLAEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVE 84
+ WRPHL EKDYG LR+IF+HHIDSFDYM++ GL+ M+ I+PVE
Sbjct: 1 KQWRPHLKGEKDYGALRDIFKHHIDSFDYMIDRGLEKMVEKIQPVE 46
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = -2
Query: 191 KDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQK 12
+D+ L + HHI+SFDYM GLD M IKPV V+D ++ +L IW+ NP +F PQK
Sbjct: 14 EDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQK 73
Query: 11 E 9
E
Sbjct: 74 E 74
>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
gi|557093303|gb|ESQ33885.1| hypothetical protein
EUTSA_v10006599mg [Eutrema salsugineum]
Length = 1183
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/80 (40%), Positives = 50/80 (62%)
Frame = -2
Query: 248 EVKEEKIGRQSWRPHLAEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSF 69
+VKE+K + + + +D+ L + HHI+SFDYM E GL M IKPV V++
Sbjct: 2 DVKEKK------KDTVPKIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPS 55
Query: 68 SKLKLRIWITNPEIFTPQKE 9
++ KL IW+ +P +++PQKE
Sbjct: 56 TERKLSIWLEDPRVYSPQKE 75
>ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
gi|557093304|gb|ESQ33886.1| hypothetical protein
EUTSA_v10006600mg [Eutrema salsugineum]
Length = 1181
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = -2
Query: 191 KDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWITNPEIFTPQK 12
+D+ L + HHI+SFDYM E GL M IKPV V+DS +KL IW+ NP ++ PQK
Sbjct: 13 EDFKELHNLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGNKLS--IWLDNPVVYPPQK 70
Query: 11 E 9
E
Sbjct: 71 E 71
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
[Fragaria vesca subsp. vesca]
Length = 1169
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWIT-NPEIFTPQK 12
D LRE+FRHHIDSFDY++ GL M+R+IKPV+V + + LRIW +P + P K
Sbjct: 12 DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71
Query: 11 ERS 3
+RS
Sbjct: 72 DRS 74
>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
[Fragaria vesca subsp. vesca]
Length = 1171
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -2
Query: 188 DYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLRIWIT-NPEIFTPQK 12
D LRE+FRHHI+SFDY++ GL M+R+IKPV+V + + LRIW +P + P K
Sbjct: 14 DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73
Query: 11 ERS 3
+RS
Sbjct: 74 DRS 76
>ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, partial [Prunus persica]
gi|462421667|gb|EMJ25930.1| hypothetical protein
PRUPE_ppa024690mg, partial [Prunus persica]
Length = 235
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 29/95 (30%)
Frame = -2
Query: 200 AEEKDYGPLREIFRHHIDSFDYMLEYGLDTMMRNIKPVEVFDSFSKLKLR---------- 51
AE +DY +RE+FRHHI+SFD+ + GL+TM+ IKP+EV DS + L
Sbjct: 7 AESEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDSSTGTSLANILSFFLFKI 66
Query: 50 -------------------IWITNPEIFTPQKERS 3
+W P +F PQKE S
Sbjct: 67 LLFTFYFPFEWRLFLTHILLWFGKPFLFPPQKEES 101