BLASTX nr result
ID: Mentha23_contig00034609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00034609
(329 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 110 3e-22
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 109 3e-22
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 93 4e-17
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer... 92 1e-16
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 92 1e-16
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 91 2e-16
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 91 2e-16
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 83 5e-14
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas... 82 1e-13
gb|EYU27089.1| hypothetical protein MIMGU_mgv1a0004242mg, partia... 75 1e-11
gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlise... 74 3e-11
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera] 72 1e-10
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr... 68 1e-09
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 68 1e-09
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer... 68 2e-09
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 68 2e-09
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 67 2e-09
ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, part... 67 3e-09
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub... 67 3e-09
ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr... 66 6e-09
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 110 bits (274), Expect = 3e-22
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 251 GEVKEEKIGRQTW-RPHLAEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFD 75
GE K + G + RPHL EKDY AL+E+F HHI+SFDYM + GL+TM+ NIKP+E+ D
Sbjct: 2 GEEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVD 61
Query: 74 SLSKLKLRIWFTNPEIFSPQKERS 3
S S LKLRIWF PE+F PQKER+
Sbjct: 62 SFSSLKLRIWFGKPELFPPQKERA 85
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 109 bits (273), Expect = 3e-22
Identities = 49/79 (62%), Positives = 61/79 (77%)
Frame = -1
Query: 239 EEKIGRQTWRPHLAEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKL 60
EE+ + RPHL EKDY AL+E+F HHI+SFDYM + GL+TM+ NIKP+E+ DS S L
Sbjct: 2 EEEKPKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSL 61
Query: 59 KLRIWFTNPEIFSPQKERS 3
KLRIWF PE+F PQKER+
Sbjct: 62 KLRIWFGKPELFPPQKERA 80
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/61 (63%), Positives = 51/61 (83%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ ALRE+F+HHI+SFDYMA+ GL+TM+R+IKP+EVFD + KLRIW NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
RPA2-like, partial [Cucumis sativus]
Length = 948
Score = 91.7 bits (226), Expect = 1e-16
Identities = 38/65 (58%), Positives = 53/65 (81%)
Frame = -1
Query: 197 EEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSP 18
E +DY ALRE+FRHHI+SFD++ + GL+T+M +IKPVE++DS + KLRIW PE++ P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 17 QKERS 3
QKER+
Sbjct: 67 QKERN 71
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 91.7 bits (226), Expect = 1e-16
Identities = 38/65 (58%), Positives = 53/65 (81%)
Frame = -1
Query: 197 EEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSP 18
E +DY ALRE+FRHHI+SFD++ + GL+T+M +IKPVE++DS + KLRIW PE++ P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 17 QKERS 3
QKER+
Sbjct: 67 QKERN 71
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Glycine max]
Length = 1151
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ ALRE+F+HHI+SFDYM + GLDTM+ +IKPVEVFD + KLRIW NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X1 [Glycine max]
Length = 1175
Score = 90.5 bits (223), Expect = 2e-16
Identities = 39/61 (63%), Positives = 49/61 (80%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ ALRE+F+HHI+SFDYM + GLDTM+ +IKPVEVFD + KLRIW NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 82.8 bits (203), Expect = 5e-14
Identities = 33/66 (50%), Positives = 51/66 (77%)
Frame = -1
Query: 200 AEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFS 21
++ ++ L+E+F+HHI+SFDYM + GLD M++ +KPV++FDS S LRIW +PE++
Sbjct: 13 SDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYP 72
Query: 20 PQKERS 3
PQK+RS
Sbjct: 73 PQKDRS 78
>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
gi|561006696|gb|ESW05690.1| hypothetical protein
PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 81.6 bits (200), Expect = 1e-13
Identities = 34/61 (55%), Positives = 47/61 (77%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ ALRE+F+HHI+SFD+M + GL+T + +IKP+EV D + KLRIW NP ++ PQKE
Sbjct: 10 DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69
Query: 8 R 6
R
Sbjct: 70 R 70
>gb|EYU27089.1| hypothetical protein MIMGU_mgv1a0004242mg, partial [Mimulus
guttatus]
Length = 133
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = -1
Query: 266 MAASSGEVKEEKIGRQTWRPHLAEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPV 87
+++ + ++ +++W PHL +EKDY ALREIF+HHIDSFDYM E+G + MM +KPV
Sbjct: 7 ISSQAAAASKDSNTKKSWSPHLDKEKDYEALREIFKHHIDSFDYMVEHGFEKMMLGLKPV 66
Query: 86 E 84
E
Sbjct: 67 E 67
>gb|EPS62433.1| hypothetical protein M569_12357, partial [Genlisea aurea]
Length = 1144
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -1
Query: 215 WRPHLAEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVE 84
WRPHL EKDYGALR+IF+HHIDSFDYM + GL+ M+ I+PVE
Sbjct: 3 WRPHLKGEKDYGALRDIFKHHIDSFDYMIDRGLEKMVEKIQPVE 46
>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
Length = 416
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVE-VFDSLSKL----KLRIWFTNPEIF 24
DY LRE+F+HHIDSFD++ E+GL+T++ ++KPVE +F + + + ++ +WF PE++
Sbjct: 7 DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPELY 66
Query: 23 SPQKERS 3
PQKERS
Sbjct: 67 PPQKERS 73
>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
gi|557093303|gb|ESQ33885.1| hypothetical protein
EUTSA_v10006599mg [Eutrema salsugineum]
Length = 1183
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -1
Query: 248 EVKEEKIGRQTWRPHLAEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSL 69
+VKE+K + + + +D+ L + HHI+SFDYM E GL M IKPV V++
Sbjct: 2 DVKEKK------KDTVPKIEDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPS 55
Query: 68 SKLKLRIWFTNPEIFSPQKE 9
++ KL IW +P ++SPQKE
Sbjct: 56 TERKLSIWLEDPRVYSPQKE 75
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = -1
Query: 191 KDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQK 12
+D+ L + HHI+SFDYM GLD M IKPV V+D ++ +L IW NP +F+PQK
Sbjct: 14 EDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQK 73
Query: 11 E 9
E
Sbjct: 74 E 74
>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Citrus sinensis]
Length = 954
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ LRE+ RHHI+SFDYM + GL M ++K V V DS + +L+I NPEIF PQKE
Sbjct: 8 DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67
Query: 8 R 6
+
Sbjct: 68 Q 68
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQKE 9
D+ LRE+ RHHI+SFDYM + GL M ++K V V DS + +L+I NPEIF PQKE
Sbjct: 8 DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67
Query: 8 R 6
+
Sbjct: 68 Q 68
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
[Fragaria vesca subsp. vesca]
Length = 1169
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFT-NPEIFSPQK 12
D LRE+FRHHIDSFDY+ GL M+R+IKPV+V + L+ LRIWF +P + P K
Sbjct: 12 DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71
Query: 11 ERS 3
+RS
Sbjct: 72 DRS 74
>ref|XP_007224731.1| hypothetical protein PRUPE_ppa024690mg, partial [Prunus persica]
gi|462421667|gb|EMJ25930.1| hypothetical protein
PRUPE_ppa024690mg, partial [Prunus persica]
Length = 235
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 29/95 (30%)
Frame = -1
Query: 200 AEEKDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLR---------- 51
AE +DY A+RE+FRHHI+SFD+ GL+TM+ IKP+EV DS + L
Sbjct: 7 AESEDYAAVRELFRHHIESFDHFVTAGLETMLNKIKPIEVVDSSTGTSLANILSFFLFKI 66
Query: 50 -------------------IWFTNPEIFSPQKERS 3
+WF P +F PQKE S
Sbjct: 67 LLFTFYFPFEWRLFLTHILLWFGKPFLFPPQKEES 101
>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like
[Fragaria vesca subsp. vesca]
Length = 1171
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = -1
Query: 188 DYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFT-NPEIFSPQK 12
D LRE+FRHHI+SFDY+ GL M+R+IKPV+V + L+ LRIWF +P + P K
Sbjct: 14 DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73
Query: 11 ERS 3
+RS
Sbjct: 74 DRS 76
>ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
gi|557093304|gb|ESQ33886.1| hypothetical protein
EUTSA_v10006600mg [Eutrema salsugineum]
Length = 1181
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = -1
Query: 191 KDYGALREIFRHHIDSFDYMAEYGLDTMMRNIKPVEVFDSLSKLKLRIWFTNPEIFSPQK 12
+D+ L + HHI+SFDYM E GL M IKPV V+DS +KL IW NP ++ PQK
Sbjct: 13 EDFKELHNLVTHHIESFDYMTEKGLAVMFNRIKPVSVYDSGNKLS--IWLDNPVVYPPQK 70
Query: 11 E 9
E
Sbjct: 71 E 71