BLASTX nr result
ID: Mentha23_contig00034022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00034022
(401 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana] gi|12... 69 9e-10
ref|XP_007209633.1| hypothetical protein PRUPE_ppa011857mg [Prun... 69 9e-10
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g... 69 9e-10
ref|XP_002322116.1| Ssu72-like family protein [Populus trichocar... 69 9e-10
ref|XP_006390504.1| hypothetical protein EUTSA_v10019100mg [Eutr... 67 2e-09
ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab... 67 2e-09
ref|XP_006492941.1| PREDICTED: RNA polymerase II subunit A C-ter... 67 3e-09
ref|XP_006421306.1| hypothetical protein CICLE_v10005966mg [Citr... 67 3e-09
ref|XP_006300550.1| hypothetical protein CARUB_v10020945mg, part... 67 3e-09
gb|EYU24491.1| hypothetical protein MIMGU_mgv1a014344mg [Mimulus... 67 3e-09
ref|XP_006363988.1| PREDICTED: RNA polymerase II subunit A C-ter... 67 3e-09
ref|XP_004235366.1| PREDICTED: RNA polymerase II subunit A C-ter... 67 3e-09
ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-ter... 67 3e-09
ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter... 65 1e-08
ref|XP_004299504.1| PREDICTED: RNA polymerase II subunit A C-ter... 65 1e-08
gb|ACN41015.1| unknown [Picea sitchensis] 65 1e-08
gb|EXC01812.1| RNA polymerase II subunit A C-terminal domain pho... 64 2e-08
gb|EPS68457.1| hypothetical protein M569_06312 [Genlisea aurea] 64 2e-08
ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin... 64 2e-08
ref|XP_007152649.1| hypothetical protein PHAVU_004G147300g [Phas... 64 3e-08
>ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana]
gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein;
85102-83684 [Arabidopsis thaliana]
gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis
thaliana] gi|28973307|gb|AAO63978.1| unknown protein
[Arabidopsis thaliana] gi|332197391|gb|AEE35512.1|
Ssu72-like protein [Arabidopsis thaliana]
Length = 193
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPYKQMFDEL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_007209633.1| hypothetical protein PRUPE_ppa011857mg [Prunus persica]
gi|462405368|gb|EMJ10832.1| hypothetical protein
PRUPE_ppa011857mg [Prunus persica]
Length = 193
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
gi|223545267|gb|EEF46774.1| Protein SSU72, putative
[Ricinus communis]
Length = 193
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_002322116.1| Ssu72-like family protein [Populus trichocarpa]
gi|222869112|gb|EEF06243.1| Ssu72-like family protein
[Populus trichocarpa]
Length = 193
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/61 (59%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_006390504.1| hypothetical protein EUTSA_v10019100mg [Eutrema salsugineum]
gi|557086938|gb|ESQ27790.1| hypothetical protein
EUTSA_v10019100mg [Eutrema salsugineum]
Length = 225
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPS+REPNVYDFGTPYKQMF
Sbjct: 38 AMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQMFDEL 97
Query: 313 R 315
R
Sbjct: 98 R 98
>ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein
ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata]
Length = 193
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPS+REPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQMFDEL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_006492941.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like isoform X1 [Citrus sinensis]
gi|568880029|ref|XP_006492942.1| PREDICTED: RNA
polymerase II subunit A C-terminal domain phosphatase
SSU72-like isoform X2 [Citrus sinensis]
Length = 193
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVY+FGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHYLLKRHGFDISSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_006421306.1| hypothetical protein CICLE_v10005966mg [Citrus clementina]
gi|557523179|gb|ESR34546.1| hypothetical protein
CICLE_v10005966mg [Citrus clementina]
Length = 193
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVY+FGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_006300550.1| hypothetical protein CARUB_v10020945mg, partial [Capsella rubella]
gi|482569260|gb|EOA33448.1| hypothetical protein
CARUB_v10020945mg, partial [Capsella rubella]
Length = 212
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/61 (57%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK+MF
Sbjct: 25 AMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPYKKMFDEL 84
Query: 313 R 315
R
Sbjct: 85 R 85
>gb|EYU24491.1| hypothetical protein MIMGU_mgv1a014344mg [Mimulus guttatus]
Length = 193
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK MF
Sbjct: 6 AMVCSSNQNRSMEAHAVLKREGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKHMFEDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_006363988.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Solanum tuberosum]
Length = 249
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/61 (55%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM++H VKLPGPS+REPNVYDFGTPYKQMF
Sbjct: 62 AMVCSSNQNRSMESHFLLKREGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKQMFDDL 121
Query: 313 R 315
R
Sbjct: 122 R 122
>ref|XP_004235366.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Solanum lycopersicum]
Length = 193
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/61 (55%), Positives = 38/61 (62%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM++H VKLPGPS+REPNVYDFGTPYKQMF
Sbjct: 6 AMVCSSNQNRSMESHCLLKREGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKQMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cucumis sativus]
gi|449506693|ref|XP_004162820.1| PREDICTED: RNA
polymerase II subunit A C-terminal domain phosphatase
SSU72-like [Cucumis sativus]
Length = 193
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK MF
Sbjct: 6 AMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Vitis vinifera]
gi|296083946|emb|CBI24334.3| unnamed protein product
[Vitis vinifera]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVY+FGTPYK MF
Sbjct: 6 AMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKHMFDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_004299504.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Fragaria vesca subsp. vesca]
Length = 193
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVY+FGTPYKQM
Sbjct: 6 AMVCSSNQNRSMEAHALLKRQGFDVSSYGTGSHVKLPGPSLREPNVYEFGTPYKQMLDEL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>gb|ACN41015.1| unknown [Picea sitchensis]
Length = 193
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 18/57 (31%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMF 303
+MVC SNQ RSM+AH VKLPGPS+REPNVYDFGTPY++MF
Sbjct: 6 AMVCASNQNRSMEAHALLKKHGFDVSSYGTGAHVKLPGPSIREPNVYDFGTPYRRMF 62
>gb|EXC01812.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Morus notabilis]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/61 (55%), Positives = 36/61 (59%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK M
Sbjct: 7 AMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMLDDL 66
Query: 313 R 315
R
Sbjct: 67 R 67
>gb|EPS68457.1| hypothetical protein M569_06312 [Genlisea aurea]
Length = 193
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/61 (55%), Positives = 36/61 (59%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK M
Sbjct: 6 AMVCSSNQNRSMEAHSLLKKEGFDVASYGTGQHVKLPGPSLREPNVYDFGTPYKHMLEDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
gi|255628381|gb|ACU14535.1| unknown [Glycine max]
Length = 193
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/61 (55%), Positives = 36/61 (59%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVYDFGTPYK M
Sbjct: 6 AMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMIEDL 65
Query: 313 R 315
R
Sbjct: 66 R 66
>ref|XP_007152649.1| hypothetical protein PHAVU_004G147300g [Phaseolus vulgaris]
gi|561025958|gb|ESW24643.1| hypothetical protein
PHAVU_004G147300g [Phaseolus vulgaris]
Length = 193
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 18/61 (29%)
Frame = +1
Query: 187 SMVCLSNQGRSMDAH------------------VKLPGPSLREPNVYDFGTPYKQMFSPQ 312
+MVC SNQ RSM+AH VKLPGPSLREPNVY+FGTPYK M+
Sbjct: 6 AMVCSSNQNRSMEAHSLLKREGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKYMYDDL 65
Query: 313 R 315
R
Sbjct: 66 R 66