BLASTX nr result
ID: Mentha23_contig00032886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00032886
(758 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 357 2e-96
emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera] 349 7e-94
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 345 1e-92
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera] 344 2e-92
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera] 343 3e-92
gb|AAP43914.1| integrase [Gossypium raimondii] 335 1e-89
gb|AAP43919.1| integrase [Gossypium hirsutum] 332 9e-89
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 328 1e-87
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 327 3e-87
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 327 4e-87
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 327 4e-87
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 326 5e-87
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 326 5e-87
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 326 6e-87
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 325 8e-87
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 324 2e-86
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 323 3e-86
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 322 7e-86
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 322 1e-85
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 320 3e-85
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 357 bits (917), Expect = 2e-96
Identities = 166/252 (65%), Positives = 204/252 (80%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
LMQ++KP+A+FSEKL GA L Y TYDKELYAL R+L+T QHYL PKEFVI+TDHESLKHL
Sbjct: 1221 LMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHL 1280
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
KG Q LN RHARWVEFIE+FPYVIKY+KG++NVVADALS RY L+S + A+ LG EHIKS
Sbjct: 1281 KGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKS 1340
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y ND F I++ C+ YY +GFLF D++LC+PN S+RELF+ E+H GGLMG
Sbjct: 1341 LYANDSDFEKIYSSCE--KFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMG 1398
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV+KT+ ++ +HF+WP MKRDVER+C RC TCK+AK+ S P GLYTPL +PS PW DI
Sbjct: 1399 HFGVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDI 1458
Query: 723 SMDFVLGLPRSK 758
SMDFV+GLPR++
Sbjct: 1459 SMDFVVGLPRTR 1470
>emb|CAN80130.1| hypothetical protein VITISV_001989 [Vitis vinifera]
Length = 340
Score = 349 bits (895), Expect = 7e-94
Identities = 161/250 (64%), Positives = 199/250 (79%)
Frame = +3
Query: 9 QERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLKG 188
Q ++P+ +FS+KLNG L Y TYDKELYAL R+LETW HYL PKEFVI+TDHESLKHLKG
Sbjct: 4 QXKRPIXYFSDKLNGTTLNYPTYDKELYALVRALETWXHYLWPKEFVIHTDHESLKHLKG 63
Query: 189 *QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSFY 368
LN RHA+WVEFIE+FPYVIKY++G+EN+VADALS RYAL+S ++A+ LG E++K Y
Sbjct: 64 QGKLNRRHAKWVEFIETFPYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELY 123
Query: 369 VNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGYF 548
VND F ++ C+ +Y G+LFR+++L VPN M +L + E+H GGLMG+F
Sbjct: 124 VNDDDFASVYGACE--KTTFGKFYRHLGYLFRENRLRVPNSFMNDLLVREAHGGGLMGHF 181
Query: 549 GVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDISM 728
GV KTL +LHEHF+WP+MKRDVER CARCITC++AKS P GLYTPL VPSAPW+DISM
Sbjct: 182 GVRKTLDVLHEHFFWPKMKRDVERACARCITCRQAKSRVLPHGLYTPLPVPSAPWVDISM 241
Query: 729 DFVLGLPRSK 758
DFVLGLPRS+
Sbjct: 242 DFVLGLPRSR 251
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 345 bits (884), Expect = 1e-92
Identities = 162/252 (64%), Positives = 197/252 (78%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
LMQE++P+ +FSEKLNG L Y TYDKELYAL R+LETWQHYL PKEFVI+TDHESLKHL
Sbjct: 748 LMQEKRPITYFSEKLNGTTLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHL 807
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
KG LN RHA+WVEFIE+F YVIKY++G+EN+VADALS RYAL+S ++A+ LG E++K
Sbjct: 808 KGQGKLNRRHAKWVEFIETFLYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKE 867
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y ND F ++ C+ + +++LCVPN SMREL + E+H GGLMG
Sbjct: 868 LYANDDDFASVYGACEKTT--------------FENRLCVPNSSMRELLVREAHGGGLMG 913
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KTL +LHEHF+WP+MK DVER CARCITC++AKS P GLYTPL VPSAPW+DI
Sbjct: 914 HFGVRKTLDVLHEHFFWPKMKCDVERACARCITCRQAKSRVLPHGLYTPLPVPSAPWVDI 973
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPRS+
Sbjct: 974 SMDFVLGLPRSR 985
>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
Length = 366
Score = 344 bits (882), Expect = 2e-92
Identities = 160/251 (63%), Positives = 197/251 (78%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQE++P+A+FSEKLNGA L Y TYDKELYAL R+LETWQHYL KEFVI+TDH+SLKHLK
Sbjct: 1 MQEKRPIAYFSEKLNGATLNYPTYDKELYALVRALETWQHYLWSKEFVIHTDHDSLKHLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
LN RH +WVEFIE+F YVIKY++G+EN+V DALS RYAL+S ++A+ LG E++K
Sbjct: 61 RQGKLNIRHPKWVEFIETFSYVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKEL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y ND ++ C+ +Y +G+LFR++KLCVPN SM EL + ++H GGLMG+
Sbjct: 121 YANDDDLASVYGACE--KAAFGKFYRLDGYLFRENKLCVPNSSMCELLVCKAHGGGLMGH 178
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FGV KTL +LHEHF+WP+MKRDVERVC RCIT ++ KS P GLYTPL VPSAPW DIS
Sbjct: 179 FGVRKTLEVLHEHFFWPKMKRDVERVCVRCITYRQTKSKVLPHGLYTPLPVPSAPWFDIS 238
Query: 726 MDFVLGLPRSK 758
MDFVLGLPRS+
Sbjct: 239 MDFVLGLPRSR 249
>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
Length = 364
Score = 343 bits (881), Expect = 3e-92
Identities = 161/251 (64%), Positives = 196/251 (78%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQE++P +FSEKLNGA L Y TYDKELYAL R+LETWQHYL PKEFVI+TDHESLKHLK
Sbjct: 1 MQEKRPTTYFSEKLNGATLNYPTYDKELYALVRALETWQHYLWPKEFVIHTDHESLKHLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
G LN RHA+WVEFIE+FPYVIKY++ +EN+VADALS RYAL+S ++A+ LG E++K
Sbjct: 61 GQGKLNRRHAKWVEFIETFPYVIKYKQCKENIVADALSRRYALVSTLNAKLLGFEYVKEL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y ND F ++ C+ +Y +G+LFR + LCVPN SM EL + E+H G MG+
Sbjct: 121 YANDNDFASVYGACE--KTAFGKFYRLDGYLFRKNILCVPNSSMCELLVREAHGGDXMGH 178
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FGV KTL +LHEHF+WP+MKRDVER CARCITC++ KS P GLYT L VPSAPW++I
Sbjct: 179 FGVRKTLDVLHEHFFWPKMKRDVERACARCITCRRTKSRVLPHGLYTLLPVPSAPWVNIY 238
Query: 726 MDFVLGLPRSK 758
MDFVLGLPRS+
Sbjct: 239 MDFVLGLPRSR 249
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 335 bits (858), Expect = 1e-89
Identities = 154/251 (61%), Positives = 196/251 (78%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQ+ KP+A+FSEKL GA L YSTYDKELYAL R+LE WQHYL KEFVI+TDHESLKHLK
Sbjct: 1 MQDSKPLAYFSEKLGGAHLNYSTYDKELYALVRALEVWQHYLLRKEFVIHTDHESLKHLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
G LN RHARWVEFIESFPY I+Y+KG++N+VADALS RY L+S +H + LG E++K
Sbjct: 61 GQGKLNKRHARWVEFIESFPYGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGFEYLKDL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y D F I+ C+ + +Y +G+LF++++LC+P SMREL + E+H+GGLMG+
Sbjct: 121 YATDSDFASIYDACEHGA--FHKFYKHDGYLFQNNRLCLPKCSMRELLVREAHSGGLMGH 178
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FGV KT +LHEHFYWP M++ VE++C+ CITCK+ KS+ P GLYTPL VPS+PW DIS
Sbjct: 179 FGVTKTYDVLHEHFYWPNMRKLVEKICSTCITCKQDKSTVMPHGLYTPLPVPSSPWTDIS 238
Query: 726 MDFVLGLPRSK 758
+DFV+GLP +K
Sbjct: 239 IDFVIGLPITK 249
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 332 bits (851), Expect = 9e-89
Identities = 153/251 (60%), Positives = 198/251 (78%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQ+++P+ +FSEKLNGA L YSTYDKEL AL R+L+ WQHYL P EFVI+TDHESLK LK
Sbjct: 1 MQDKQPIGYFSEKLNGAQLNYSTYDKELLALVRALQVWQHYLLPNEFVIHTDHESLKWLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
G L+ RHARWVEFIE+FPY+I+Y+ G +NVVADALS RY LI+ ++A+ LG EHIK
Sbjct: 61 GQGKLSKRHARWVEFIETFPYMIQYKIGNDNVVADALSRRYTLITTLNAKVLGFEHIKEL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y +D F I+ C + +Y+ +G LFR ++LC+P SMREL + E+H+GGLMG+
Sbjct: 121 YDDDTDFSHIYKNC--GHTAFEKFYLVDGLLFRLNRLCIPKCSMRELLIHEAHSGGLMGH 178
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FGVAKTL +L EHF+WP MK+DVE+VC++CITCK+AKS GLYTPL +P++PW+D+S
Sbjct: 179 FGVAKTLDILQEHFHWPHMKKDVEKVCSKCITCKQAKSKVMLHGLYTPLPIPTSPWVDLS 238
Query: 726 MDFVLGLPRSK 758
MDF+LGLPR+K
Sbjct: 239 MDFILGLPRTK 249
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 328 bits (841), Expect = 1e-87
Identities = 156/252 (61%), Positives = 195/252 (77%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
LMQ +PVA+FSEKL GA L YS YDKELYAL R+LETWQHYL PKEFVI++DHE+LK+L
Sbjct: 1032 LMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYL 1091
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
KG LN RHA+WVEFIE+FPYV+KY+KG+EN+VADALS + L++ + + G+E IK
Sbjct: 1092 KGQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKE 1151
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y D F +A C + + Y++ +GFLFR +KLCVP+ S+R L + E+HAGGLMG
Sbjct: 1152 LYSADLDFSEPYAKCTA-GKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMG 1210
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FG KT +L +HFYWP+M+RDV+R+ RC+TC KAKS NP GLYTPL VPSAPW DI
Sbjct: 1211 HFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDI 1270
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1271 SMDFVLGLPRTK 1282
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 327 bits (838), Expect = 3e-87
Identities = 155/250 (62%), Positives = 195/250 (78%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
LM + KP+A+FSEK +GA L Y TYDKELYAL R+L TWQHYL P+EFV+ TDHESLK+L
Sbjct: 740 LMPDSKPIAYFSEKPSGATLNYLTYDKELYALVRALATWQHYLWPREFVVKTDHESLKYL 799
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
K L+ RHA+WVEFIE+FPYVI Y++G+ENVVADALS RY LIS + ++ LG + IK
Sbjct: 800 KSQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVADALSRRYVLISTLTSKLLGFDQIKF 859
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y ND FG IFA C + + + + FLF+++KLCVPN S+RELF+ E+H GGLMG
Sbjct: 860 LYANDSDFGEIFAEC--KLGPFEKFNLQDEFLFKENKLCVPNCSLRELFVREAHYGGLMG 917
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KTL +L EHFYWP M++DVE+VC+ C+ CK+AKS + P GLYTPL V ++PWIDI
Sbjct: 918 HFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNSPWIDI 977
Query: 723 SMDFVLGLPR 752
SMDF+LGLPR
Sbjct: 978 SMDFILGLPR 987
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 327 bits (837), Expect = 4e-87
Identities = 155/251 (61%), Positives = 194/251 (77%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQ +PVA+FSEKL GA L YS YDKELYAL R+LETWQHYL PKEFVI++DHE+LK+LK
Sbjct: 1 MQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
G LN RHA+WVEFIE+FPYV+KY+KG+EN+VADALS + L++ + + G+E IK
Sbjct: 61 GQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKEL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y D F +A C + + Y++ +GFLFR +KLCVP+ S+R L + E+HAGGLMG+
Sbjct: 121 YSADLDFSEPYAKCTA-GKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGH 179
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FG KT +L +HFYWP+M+RDV+R+ RC+TC KAKS NP GLYTPL VPSAPW DIS
Sbjct: 180 FGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDIS 239
Query: 726 MDFVLGLPRSK 758
MDFVLGLPR+K
Sbjct: 240 MDFVLGLPRTK 250
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 327 bits (837), Expect = 4e-87
Identities = 156/252 (61%), Positives = 195/252 (77%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+QE KPVA+FSEKL+G +L YSTYDKEL+AL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1057 LLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHI 1116
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
+ LN RHA+WVEFIESFPYVIK++KG+ENV+ADALS RYA++S + + GLE IK
Sbjct: 1117 RSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKE 1176
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y +D F + C R + + ++ GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1177 QYAHDDDFKNVLLNCK-EGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 1235
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KT +L +HF+WP+M+RDVER ARC TC+KAKS NP GLY PL VPS PW DI
Sbjct: 1236 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDI 1295
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1296 SMDFVLGLPRTK 1307
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 326 bits (836), Expect = 5e-87
Identities = 156/252 (61%), Positives = 195/252 (77%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+QE KPVA+FSEKL+G +L YSTYDKEL+AL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 370 LLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHI 429
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
+ LN RHA+WVEFIESFPYVIK++KG+ENV+ADALS RYA++S + + GLE IK
Sbjct: 430 RSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKE 489
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y +D F + C R + + ++ GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 490 QYAHDDDFKDVLLNC-MEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 548
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KT +L +HF+WP+M+RDVER ARC TC+KAKS NP GLY PL VPS PW DI
Sbjct: 549 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDI 608
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 609 SMDFVLGLPRTK 620
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 326 bits (836), Expect = 5e-87
Identities = 154/251 (61%), Positives = 191/251 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
LMQ++K +AFFSEKL GA L Y TYDKELYAL R+L+ WQHYL PK FVI+TDHESLKHL
Sbjct: 730 LMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDHESLKHL 789
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
KG Q LN RHARWVEFIE+F YVIKY+KG++NVVADALS RY L+S ++ + +G E IK
Sbjct: 790 KGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVADALSQRYTLLSTLNVKLMGFEQIKE 849
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y D F ++ C+ Y+ + FLF +++LCVPN S+R+LF+ E+H GGLMG
Sbjct: 850 VYETDHDFQEVYKACE--KFASGRYFRQDKFLFYENRLCVPNCSLRDLFVREAHGGGLMG 907
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FG+AKTL ++ EHF WP MK DV+R+C RC TCK+AKS P GLYTPL +P PW DI
Sbjct: 908 HFGIAKTLEVMTEHFRWPHMKCDVKRICGRCNTCKQAKSKIQPNGLYTPLPIPKHPWNDI 967
Query: 723 SMDFVLGLPRS 755
SMDFV+GLPR+
Sbjct: 968 SMDFVMGLPRT 978
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 326 bits (835), Expect = 6e-87
Identities = 155/251 (61%), Positives = 194/251 (77%)
Frame = +3
Query: 6 MQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHLK 185
MQ +PVA+FSEKL GA L YS YDKELYAL R+LETWQHYL PKEFVI++DHE+LK+LK
Sbjct: 1 MQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLK 60
Query: 186 G*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKSF 365
G LN RHA+WVEFIE+FPYV+KY+KG+EN+VADALS + L++ + + G+E IK
Sbjct: 61 GQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVPGIESIKEL 120
Query: 366 YVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMGY 545
Y D F +A C + + Y++ +GFLFR +KLCVP+ S+R L + E+HAGGLMG+
Sbjct: 121 YPADLDFSEPYAKCTA-GKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGH 179
Query: 546 FGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDIS 725
FG KT +L +HFYWP+M+RDV+R+ RC+TC KAKS NP GLYTPL VPSAPW DIS
Sbjct: 180 FGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDIS 239
Query: 726 MDFVLGLPRSK 758
MDFVLGLPR+K
Sbjct: 240 MDFVLGLPRTK 250
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 325 bits (834), Expect = 8e-87
Identities = 156/252 (61%), Positives = 196/252 (77%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+QE KPVA+FSEKL+G+ L YSTYDKELYAL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1032 LLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1091
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
+ LN RHA+WVEFIESFPYVIK++KG+EN++ADALS RY L++ + + GLE IK
Sbjct: 1092 RSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKD 1151
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
YV+D F + C + + + Y VS+GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1152 QYVHDADFKDVLLHCK-DGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1210
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FG KT +L HF+WP+M+RDV R+ ARC TC+KAKS NP GLY PL VPSAPW DI
Sbjct: 1211 HFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDI 1270
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR++
Sbjct: 1271 SMDFVLGLPRTR 1282
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 324 bits (830), Expect = 2e-86
Identities = 154/252 (61%), Positives = 194/252 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+Q+ KPVA+FSEK +G +L YSTYDKELYAL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1073 LLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1132
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
K LN RHA+WVEFIE+FPYVIK++KG+ENV+ADALS RY ++S + + GLE IK
Sbjct: 1133 KSQAKLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKD 1192
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
YV+D F + C R + + +++GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1193 QYVHDAEFKDVLQNCK-EGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMG 1251
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KT +L HF+WP+M+RDVER ARC TC++AKS NP GLY PL VPS PW DI
Sbjct: 1252 HFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDI 1311
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1312 SMDFVLGLPRTK 1323
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 323 bits (829), Expect = 3e-86
Identities = 155/252 (61%), Positives = 193/252 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+Q+ KPVA+FSEKL+G +L YSTYDKELYAL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1088 LLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1147
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
K LN RHA+WVEFIE+FPYVIK++KG++NV+ADALS RY ++S + + GLE IK
Sbjct: 1148 KSQAKLNRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKD 1207
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
YV+D F + C R + + ++ GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1208 QYVHDADFKDVLENC-REGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMG 1266
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV K +L HF+WPRM+RDVER ARC TC+KAKS NP GLY PL VPS PW DI
Sbjct: 1267 HFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDI 1326
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1327 SMDFVLGLPRTK 1338
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 322 bits (826), Expect = 7e-86
Identities = 153/252 (60%), Positives = 193/252 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+QE KP+ +FSEKL+G +L YSTYDKEL+AL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1057 LLQEGKPIEYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHI 1116
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
+ LN RHA+WVEFIESFPYVIK++KG+ENV+ADALS RYA++S + + GLE IK
Sbjct: 1117 RSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKE 1176
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y +D F + C R + + ++ GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1177 QYAHDDDFKDVLLNCK-EGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMG 1235
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KT +L +HF+WP+M+RDVER ARC TC+KAK NP GLY PL VPS PW DI
Sbjct: 1236 HFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDI 1295
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1296 SMDFVLGLPRTK 1307
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 322 bits (824), Expect = 1e-85
Identities = 155/252 (61%), Positives = 192/252 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+Q+ KPVA+FSEKL+G +L YSTYDKELYAL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 1085 LLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHI 1144
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
K LN RHA+WVEFIE+FPYVIK +KG++NV+ADALS RY ++S + + GLE IK
Sbjct: 1145 KSQAKLNRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKD 1204
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
YV+D F + C R + + ++ GF+FR +KLC+P S+R L + E+H GGLMG
Sbjct: 1205 QYVHDADFKDVLENC-REGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMG 1263
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV K +L HF+WPRM+RDVER ARC TC+KAKS NP GLY PL VPS PW DI
Sbjct: 1264 HFGVKKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDI 1323
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1324 SMDFVLGLPRTK 1335
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 320 bits (820), Expect = 3e-85
Identities = 152/252 (60%), Positives = 192/252 (76%)
Frame = +3
Query: 3 LMQERKPVAFFSEKLNGAALRYSTYDKELYALKRSLETWQHYLRPKEFVIYTDHESLKHL 182
L+QE KPVA+FSEKL+G +L YSTYDK+L+AL R+LETWQHYL PKEFVI++DHESLKH+
Sbjct: 953 LLQEGKPVAYFSEKLSGPSLNYSTYDKQLFALVRTLETWQHYLWPKEFVIHSDHESLKHI 1012
Query: 183 KG*QNLNSRHARWVEFIESFPYVIKYRKGEENVVADALSHRYALISVMHAQCLGLEHIKS 362
+ LN RHA+WVEFIESFPYVIK++KG+ENV+ DALS RYA++S + + GLE IK
Sbjct: 1013 RSQAKLNRRHAKWVEFIESFPYVIKHKKGKENVIVDALSRRYAMLSQLDFKIFGLETIKE 1072
Query: 363 FYVNDPFFGPIFALCDGNSRVVDSYYVSEGFLFRDSKLCVPNYSMRELFMLESHAGGLMG 542
Y +D F + C R + + ++ GF+FR +KLC+P S+ L + E+H GGLMG
Sbjct: 1073 QYAHDDDFKDVLLNCK-EGRTWNKFVLTNGFVFRANKLCIPASSVHMLLLQEAHGGGLMG 1131
Query: 543 YFGVAKTLSLLHEHFYWPRMKRDVERVCARCITCKKAKSSSNPFGLYTPLHVPSAPWIDI 722
+FGV KT +L +H +WP+M+RDVER ARC TC+KAKS NP GLY PL VPS PW DI
Sbjct: 1132 HFGVKKTEDILADHLFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDI 1191
Query: 723 SMDFVLGLPRSK 758
SMDFVLGLPR+K
Sbjct: 1192 SMDFVLGLPRTK 1203