BLASTX nr result
ID: Mentha23_contig00032755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00032755
(426 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 157 1e-36
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 150 1e-34
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 148 9e-34
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 145 6e-33
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 144 1e-32
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 143 3e-32
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 143 3e-32
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 143 3e-32
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 143 3e-32
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 142 6e-32
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 142 6e-32
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 141 8e-32
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 141 8e-32
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 141 1e-31
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 140 1e-31
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 140 2e-31
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 139 4e-31
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 139 4e-31
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 139 4e-31
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 139 5e-31
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 157 bits (398), Expect = 1e-36
Identities = 70/138 (50%), Positives = 100/138 (72%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
+DFRPI+C N+VYK+I+KII NR+ P+L +S QAAF+KGR + +N LA ELI+ Y
Sbjct: 1 NDFRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYN 60
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
+ S + + M+K+D+RKA+D + WDF+ ++L F P F+ WI C+TSP FS+A+NG
Sbjct: 61 KSSCLRSS-MLKVDIRKAFDTVCWDFVIKILRAQGFPPLFVSWIQECITSPRFSVALNGE 119
Query: 363 AHGFIRGQRGLRQGDPMS 416
GF G++GLRQGDP+S
Sbjct: 120 LAGFFEGKKGLRQGDPLS 137
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 150 bits (380), Expect = 1e-34
Identities = 69/140 (49%), Positives = 98/140 (70%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KII NR+ LL + I+ Q+AF+K R + +N LA EL+K Y +
Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHK 234
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S I+ARC +KID+ KA+D + W FL L +NF P FIHWI C+T+ +FS+ +NG
Sbjct: 235 DS-ISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDL 293
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
G+ + +RGLRQG +SP L
Sbjct: 294 VGYFQSKRGLRQGCSLSPYL 313
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 148 bits (373), Expect = 9e-34
Identities = 69/140 (49%), Positives = 101/140 (72%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
+FRPIAC +V+YKII+KI+T+RM +L+ ++S Q+AF+KGR I DN L+ EL+K Y R
Sbjct: 196 NFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSR 255
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
GI+ RCMVKIDL+KAY+ + W F+K ++ L F F++W+M C+T+ +++ ING
Sbjct: 256 -KGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDL 314
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
++GLRQGDP+SP L
Sbjct: 315 TRPFAAKKGLRQGDPISPYL 334
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 145 bits (366), Expect = 6e-33
Identities = 67/141 (47%), Positives = 100/141 (70%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
SDFRPI+C N +YK+I +++T+R+ LL +ISSAQ+AF+ GR + +N LA +L+ Y
Sbjct: 521 SDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYN 580
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
S I+ R M+K+DL+KA+D + W+F+ L L FI+WI C+++PTF+++INGG
Sbjct: 581 W-SNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGG 639
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
GF + +GLRQGDP+SP L
Sbjct: 640 NGGFFKSTKGLRQGDPLSPYL 660
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 144 bits (364), Expect = 1e-32
Identities = 64/141 (45%), Positives = 102/141 (72%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
++FRPI+C N +YK+I+K++ R+ +L IS +Q+AF+KGR +T+N LA EL++ +
Sbjct: 520 TEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFG 579
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
+ + I++R ++K+DLRKA+D + W F+ E L N P F++WI C+TS +FSI ++G
Sbjct: 580 QAN-ISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGS 638
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
G+ +G +GLRQGDP+SPSL
Sbjct: 639 LCGYFKGSKGLRQGDPLSPSL 659
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 143 bits (360), Expect = 3e-32
Identities = 63/141 (44%), Positives = 100/141 (70%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
S+FRPI+C N +YK+I+K++T+R+ LL +I +Q+AF+ GR + +N LA E++ Y
Sbjct: 381 SEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYN 440
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
R++ I+ R M+K+DL+KA+D + W+F+ L L +I+WI C+T+P+F+I++NG
Sbjct: 441 RLN-ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGA 499
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
GF R +GLRQGDP+SP L
Sbjct: 500 TGGFFRSTKGLRQGDPLSPYL 520
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 143 bits (360), Expect = 3e-32
Identities = 63/141 (44%), Positives = 99/141 (70%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
S +RP++C NV+YKII+KII NR+ +L K I+ Q AF+K R + +N LA EL+K Y
Sbjct: 54 SHYRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYH 113
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
+ S +++RC +KID+ KA++ + W F++ +L ++F F+HWIM C+++ +FS+ +NG
Sbjct: 114 KES-VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGE 172
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
GF + +RGLRQG +SP L
Sbjct: 173 LVGFFQSKRGLRQGCSLSPYL 193
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 143 bits (360), Expect = 3e-32
Identities = 66/140 (47%), Positives = 99/140 (70%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
+FRPIAC V+YKII+K++TNRM ++ ++++ AQ+ FI GR I DN LA ELI+ Y R
Sbjct: 513 EFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTR 572
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
++ RC++K+D+RKAYD + W FL+ +L+ F F+ WIM CV++ ++S+ +NG
Sbjct: 573 -KHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIP 631
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
+ ++GLRQGDPMSP L
Sbjct: 632 TQPFQARKGLRQGDPMSPFL 651
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 143 bits (360), Expect = 3e-32
Identities = 63/141 (44%), Positives = 100/141 (70%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
S+FRPI+C N +YK+I+K++T+R+ LL +I +Q+AF+ GR + +N LA E++ Y
Sbjct: 381 SEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYN 440
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
R++ I+ R M+K+DL+KA+D + W+F+ L L +I+WI C+T+P+F+I++NG
Sbjct: 441 RLN-ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGA 499
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
GF R +GLRQGDP+SP L
Sbjct: 500 TGGFFRSTKGLRQGDPLSPYL 520
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 142 bits (357), Expect = 6e-32
Identities = 62/141 (43%), Positives = 98/141 (69%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
+DFRPI+C N +YK+I K++T+R+ LL+++IS +Q+AF+ GR +++N LA E++ Y
Sbjct: 522 TDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYN 581
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
I++R M+K+DLRKA+D + WDF+ L F+ WI C+++P FS+ +NG
Sbjct: 582 -TKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGS 640
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
+ GF + +GLRQGDP+SP L
Sbjct: 641 SSGFFKSNKGLRQGDPLSPYL 661
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 142 bits (357), Expect = 6e-32
Identities = 62/141 (43%), Positives = 98/141 (69%)
Frame = +3
Query: 3 SDFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYE 182
+DFRPI+C N +YK+I K++T+R+ LL+++IS +Q+AF+ GR +++N LA E++ Y
Sbjct: 522 TDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYN 581
Query: 183 RVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGG 362
I++R M+K+DLRKA+D + WDF+ L F+ WI C+++P FS+ +NG
Sbjct: 582 -TKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGS 640
Query: 363 AHGFIRGQRGLRQGDPMSPSL 425
+ GF + +GLRQGDP+SP L
Sbjct: 641 SSGFFKSNKGLRQGDPLSPYL 661
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 141 bits (356), Expect = 8e-32
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KI+ NR+ LL + I+ Q++F+K R + +N LA +L+K Y +
Sbjct: 81 DYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHK 140
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S I+ RC +KID+ KA D + W FL L ++F FIHWI C+T+P+FS+ +NG
Sbjct: 141 DS-ISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGEL 199
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
GF + RGLRQG +SP L
Sbjct: 200 AGFFQSSRGLRQGCALSPYL 219
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 141 bits (356), Expect = 8e-32
Identities = 67/140 (47%), Positives = 91/140 (65%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KI+ NR+ LL I Q+AF+K R + +N LA EL+K Y +
Sbjct: 825 DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S +T RC +KID+ KA+D + W FL L LNF F HWI C+++ TFS+ +NG
Sbjct: 885 ES-VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGEL 943
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
GF RGLRQG +SP L
Sbjct: 944 AGFFGSSRGLRQGCALSPYL 963
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 141 bits (355), Expect = 1e-31
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK I+KI+ NR+ +L K I Q+AF+K R + +N LA EL+K Y +
Sbjct: 249 DYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHK 308
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S I+ RC +KID+ KA+D + W FL VL +NF FIHWI C+++ +FSI +NG
Sbjct: 309 DS-ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGEL 367
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
G+ R RGLRQG +SP L
Sbjct: 368 AGYFRSARGLRQGCSLSPYL 387
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 140 bits (354), Expect = 1e-31
Identities = 66/140 (47%), Positives = 96/140 (68%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KII NR+ +L + I+ Q+AFIK R + +N LA EL+K Y +
Sbjct: 46 DYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHK 105
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S ++ RC +KID+ KA+D + W FL+ VL L+F F+HWIM CVT+ +FS+ +N
Sbjct: 106 DS-VSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNREL 164
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
G+ RGLRQG ++P L
Sbjct: 165 AGYFNSLRGLRQGCSLTPYL 184
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 140 bits (352), Expect = 2e-31
Identities = 66/140 (47%), Positives = 92/140 (65%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KII NR+ +L I Q+AF++ R + +N LA EL+K Y +
Sbjct: 101 DYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHK 160
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
S I+ RC +KID+ KA+D + W FL L LNF F HWI C+++ TFS+ +NG
Sbjct: 161 DS-ISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGEL 219
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
GF +RGLRQG +SP L
Sbjct: 220 AGFFGSKRGLRQGCALSPYL 239
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 139 bits (350), Expect = 4e-31
Identities = 62/139 (44%), Positives = 95/139 (68%)
Frame = +3
Query: 9 FRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYERV 188
FRP+AC +YK+IT++I+ R++ + + + S Q FIKGR + +N LA EL+ ++
Sbjct: 70 FRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASELVDNFQ-A 128
Query: 189 SGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAH 368
G T+R +++DL KAYD ++W+FL +L LN P FI+WI C+++P++SIA NG
Sbjct: 129 EGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAYNGELI 188
Query: 369 GFIRGQRGLRQGDPMSPSL 425
GF G++G+RQGDPMS L
Sbjct: 189 GFFVGKKGIRQGDPMSSHL 207
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 139 bits (350), Expect = 4e-31
Identities = 65/145 (44%), Positives = 97/145 (66%), Gaps = 4/145 (2%)
Frame = +3
Query: 3 SDFRPIACTN----VVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELI 170
+DFRPI+C + +YK+I +++TNR+ LL ++IS Q+AF+ GR + +N LA EL+
Sbjct: 470 NDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELV 529
Query: 171 KKYERVSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIA 350
+ Y R I R M+K+DLRKA+D I WDF+ L + F++WI C+++PTFS+
Sbjct: 530 QGYNR-QNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVC 588
Query: 351 INGGAHGFIRGQRGLRQGDPMSPSL 425
+NG GF + RGLRQG+P+SP L
Sbjct: 589 VNGNTGGFFKSTRGLRQGNPLSPFL 613
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 139 bits (350), Expect = 4e-31
Identities = 62/139 (44%), Positives = 95/139 (68%)
Frame = +3
Query: 9 FRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYERV 188
FRP+AC +YK+IT++I+ R++ + + + S Q FIKGR + +N LA EL+ ++
Sbjct: 70 FRPVACCTTIYKVITRLISKRLNLFIDQAVQSNQVGFIKGRLLCENVLLASELVDNFQ-A 128
Query: 189 SGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAH 368
G T+R +++DL KAYD ++W+FL +L LN P FI+WI C+++P++SIA NG
Sbjct: 129 EGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAYNGELI 188
Query: 369 GFIRGQRGLRQGDPMSPSL 425
GF G++G+RQGDPMS L
Sbjct: 189 GFFVGKKGIRQGDPMSSHL 207
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 139 bits (349), Expect = 5e-31
Identities = 66/140 (47%), Positives = 94/140 (67%)
Frame = +3
Query: 6 DFRPIACTNVVYKIITKIITNRMSPLLHKLISSAQAAFIKGRCITDNFFLAQELIKKYER 185
D+RPI+C NV+YK+I+KII NR+ +L K I+ Q+AF+K R + +N LA EL+K Y +
Sbjct: 528 DYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHK 587
Query: 186 VSGITARCMVKIDLRKAYDCISWDFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGA 365
+ I+ RC +KID+ KA+D + W FL V L F FIHWI C+T+ +FS+ +NG
Sbjct: 588 DT-ISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGEL 646
Query: 366 HGFIRGQRGLRQGDPMSPSL 425
G+ + RGLRQG +SP L
Sbjct: 647 AGYFQSSRGLRQGCALSPYL 666