BLASTX nr result
ID: Mentha23_contig00032087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00032087
(589 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 164 2e-38
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] 163 3e-38
emb|CAN83592.1| hypothetical protein VITISV_031653 [Vitis vinifera] 155 8e-36
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 154 2e-35
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 152 9e-35
emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] 150 2e-34
emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera] 150 3e-34
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] 145 1e-32
emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera] 144 2e-32
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 142 5e-32
ref|XP_006384576.1| hypothetical protein POPTR_0004s18110g, part... 141 1e-31
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 123 3e-26
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 122 6e-26
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 122 7e-26
gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana] 122 7e-26
gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [... 121 1e-25
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 120 4e-25
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 119 6e-25
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 119 6e-25
gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana] 119 8e-25
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 164 bits (415), Expect = 2e-38
Identities = 84/159 (52%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Frame = +3
Query: 114 DSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSS 293
DS+ + M HM+TIKL STNYL+W Q+ PLL+ Q L VDGS PPP TI V + SS
Sbjct: 3 DSSFSFNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPPPITIAVDSSSS 62
Query: 294 -PNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRL 470
PNP++ W DQ + L S+LTEEAM ++G T++ VW AL +F+ SK ELR+
Sbjct: 63 QPNPQYVAWQLQDQRLLSLLFSSLTEEAMTEVLGLTTARDVWLALENSFSHISKTCELRI 122
Query: 471 KDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
KD+LQ K+G RSV+EY FK LCDQL +MGR VD+TD
Sbjct: 123 KDDLQLIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDTD 161
>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
Length = 1095
Score = 163 bits (413), Expect = 3e-38
Identities = 84/159 (52%), Positives = 107/159 (67%), Gaps = 1/159 (0%)
Frame = +3
Query: 114 DSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSS 293
DS+ + M HM+TIKL STNYL+W Q+ PLL+ Q L VDGS P P TI V + SS
Sbjct: 3 DSSFSFNTMIHMITIKLSSTNYLLWRNQLLPLLQCQNLLSHVDGSVAPSPITIAVDSSSS 62
Query: 294 -PNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRL 470
PNP++ W DQ + L S+LTEEAMA ++G ++ VW AL +F+ SK RELR+
Sbjct: 63 QPNPQYVAWQLQDQRLLSLLFSSLTEEAMAEVLGLTIARDVWLALENSFSHISKTRELRI 122
Query: 471 KDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
KD+LQ K+G RSV+EY FK LCDQL +MGR VD+TD
Sbjct: 123 KDDLQLIKRGTRSVTEYSRSFKALCDQLTAMGRSVDDTD 161
>emb|CAN83592.1| hypothetical protein VITISV_031653 [Vitis vinifera]
Length = 495
Score = 155 bits (392), Expect = 8e-36
Identities = 79/154 (51%), Positives = 104/154 (67%)
Frame = +3
Query: 126 PLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNPE 305
P + + HMVTIKL S+NYL+W Q+ PLL +Q+ + ++DG+ PPR T N PN +
Sbjct: 11 PFNTLIHMVTIKLSSSNYLLWKSQLLPLLESQELIGYMDGTTEIPPR-FTSENSQKPNIK 69
Query: 306 FETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQ 485
W + DQ + L+S+LTEEAMA +V TS+ VW AL F+ SKARE+RLKD+LQ
Sbjct: 70 HVVWKHTDQRLLSLLLSSLTEEAMAEVVELSTSREVWVALENTFSHRSKAREIRLKDDLQ 129
Query: 486 SSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
K+G RSVSEY FK LC+QL ++GRPVD TD
Sbjct: 130 LMKRGTRSVSEYARAFKALCNQLHAIGRPVDGTD 163
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 154 bits (388), Expect = 2e-35
Identities = 75/155 (48%), Positives = 106/155 (68%)
Frame = +3
Query: 123 IPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNP 302
+P + + HM+TIKL S+NYL+W Q+ PLL +Q L +VDG+ PPPR ++ +
Sbjct: 9 LPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPR-FEPETSTTLST 67
Query: 303 EFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDEL 482
++ W DQ + L+S+LTEEA+AV+VG T++ VW AL F+ SKARELRLKD+L
Sbjct: 68 KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARELRLKDDL 127
Query: 483 QSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
Q K+G + V+EY FK LCDQL ++GRPV++TD
Sbjct: 128 QLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDTD 162
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 152 bits (383), Expect = 9e-35
Identities = 75/155 (48%), Positives = 105/155 (67%)
Frame = +3
Query: 123 IPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNP 302
+P + + HM+TIKL S+NYL+W Q+ PLL +Q L +VDG+ PPPR ++ +
Sbjct: 9 LPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPR-FEPETSTTLST 67
Query: 303 EFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDEL 482
++ W DQ + L+S+LTEEA+AV+VG T++ VW AL F+ SKARELRLKD+L
Sbjct: 68 KYLAWKAADQRLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARELRLKDDL 127
Query: 483 QSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
Q K G + V+EY FK LCDQL ++GRPV++TD
Sbjct: 128 QLMKCGTKPVAEYARTFKTLCDQLHAIGRPVEDTD 162
>emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]
Length = 787
Score = 150 bits (380), Expect = 2e-34
Identities = 73/155 (47%), Positives = 105/155 (67%)
Frame = +3
Query: 123 IPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNP 302
+P + + HM+TIKL S+NYL+W Q+ PLL +Q L +VDG+ PPPR ++ +
Sbjct: 9 LPFNTLIHMITIKLSSSNYLLWKSQLLPLLESQDLLGYVDGTLVPPPR-FEPATSTTLST 67
Query: 303 EFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDEL 482
++ W DQ + L+S+LTEEA+A +VG T++ VW AL F+ SKARELRLKD+L
Sbjct: 68 KYLAWKAADQRLLCLLLSSLTEEAIAAVVGLSTAREVWLALENTFSHHSKARELRLKDDL 127
Query: 483 QSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
Q K+G + V+EY FK LCDQL ++GRPV++T+
Sbjct: 128 QLMKRGTKPVAEYARTFKTLCDQLHAIGRPVEDTN 162
>emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera]
Length = 430
Score = 150 bits (378), Expect = 3e-34
Identities = 74/166 (44%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +3
Query: 93 MANTSVFDSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTI 272
M +S T+PL+ M HM+TIKL S+NYL+W Q PLL +Q+ ++DGS P I
Sbjct: 1 MVVSSPSPPTLPLNTMVHMLTIKLTSSNYLLWRNQFVPLLASQELFGYLDGSIAAPSPMI 60
Query: 273 TVGN-VSSPNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSS 449
T + S NP + +W + DQ + L S+LTEE+M+ ++G S W AL +F+ S
Sbjct: 61 TASDGTSKSNPAYTSWLHTDQTLLSLLYSSLTEESMSEVLGFRHSHEAWHALEVSFSHRS 120
Query: 450 KARELRLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
K REL+LKDELQ +G +S++E+ FK LCDQL ++GRP+D+TD
Sbjct: 121 KTRELQLKDELQLMHRGSQSIAEFSRTFKGLCDQLVAIGRPIDDTD 166
>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
Length = 1212
Score = 145 bits (365), Expect = 1e-32
Identities = 71/166 (42%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Frame = +3
Query: 93 MANTSVFDSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTI 272
MA+++ S++PL+ M HM+TIKL S+NYL+W Q PLL +Q ++DGS P TI
Sbjct: 1 MADSASSSSSLPLNTMVHMLTIKLTSSNYLLWKNQFVPLLASQDLFSYLDGSIRAPSTTI 60
Query: 273 TVG-NVSSPNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSS 449
+ NP + +W + DQ + L +LTEE+M+ ++G S W L +F+ S
Sbjct: 61 LAAYGTTKSNPVYTSWLHTDQTLLSLLYYSLTEESMSEVLGLCHSHEAWHTLEVSFSHRS 120
Query: 450 KARELRLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
K REL+ KDELQ + G +S++E+ FK LCDQLA++GRP+D+TD
Sbjct: 121 KTRELQFKDELQLMQXGFQSIAEFSSTFKGLCDQLAAIGRPIDDTD 166
>emb|CAN77506.1| hypothetical protein VITISV_029387 [Vitis vinifera]
Length = 314
Score = 144 bits (362), Expect = 2e-32
Identities = 72/166 (43%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Frame = +3
Query: 93 MANTSVFDSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTI 272
MA +S S +PL+ M HM+TIK+ S NYL+W Q PLL +Q L F+DGS P +
Sbjct: 1 MATSSSSSSPLPLNTMVHMLTIKVTSFNYLLWRNQFIPLLTSQDLLGFLDGSVLAPSPQV 60
Query: 273 TVGN-VSSPNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSS 449
T N + NP + +W DQ + L S+LTEE+M+ ++G + W+ L +F+ S
Sbjct: 61 TDSNGTTQVNPAYTSWLTTDQTLLSLLYSSLTEESMSEVLGLSHAHEAWTTLEASFSHRS 120
Query: 450 KARELRLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
K REL+LKDELQ ++G +SV+E+ K L DQLA++GRP+D+ D
Sbjct: 121 KTRELQLKDELQLMQRGSKSVAEFSRLSKRLYDQLAAIGRPIDDLD 166
>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 142 bits (359), Expect = 5e-32
Identities = 71/155 (45%), Positives = 103/155 (66%)
Frame = +3
Query: 123 IPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNP 302
+P + + HM+TI+L S+NYL+W Q+ PLL +Q L +VDG+ P PR V + +
Sbjct: 9 LPFNTLIHMITIELSSSNYLLWKSQLLPLLESQDLLGYVDGTLVPLPRFEPVTSTIL-ST 67
Query: 303 EFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDEL 482
++ W DQ + L+S+LTEEA+A +VG T++ VW AL F+ SKARELRLKD+L
Sbjct: 68 KYLAWKAADQRLLCLLLSSLTEEAIATVVGLSTAREVWLALENTFSHHSKARELRLKDDL 127
Query: 483 QSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
Q K+ + V+E+ FK LCDQL ++GRPV++TD
Sbjct: 128 QLMKRSTKPVAEHARTFKTLCDQLHAIGRPVEDTD 162
>ref|XP_006384576.1| hypothetical protein POPTR_0004s18110g, partial [Populus
trichocarpa] gi|550341298|gb|ERP62373.1| hypothetical
protein POPTR_0004s18110g, partial [Populus trichocarpa]
Length = 317
Score = 141 bits (356), Expect = 1e-31
Identities = 72/155 (46%), Positives = 94/155 (60%)
Frame = +3
Query: 123 IPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNVSSPNP 302
+P + HM+ +KL S NYL+W+ QI PL+ Q + VDGS PPP+ N +PN
Sbjct: 10 LPFTTLIHMIIVKLSSANYLIWHSQILPLIEIQDLVGHVDGSIVPPPK-FDSPNSQTPND 68
Query: 303 EFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDEL 482
++ W DQ + L S+LTEEA+A IVG T+ VW AL T FN K RE+ LKDEL
Sbjct: 69 KYLAWKAIDQRLLCLLRSSLTEEALAEIVGFSTAHGVWLALETTFNHKYKTREIHLKDEL 128
Query: 483 QSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDETD 587
QS K+ RSV++ FK CDQL ++GR VD D
Sbjct: 129 QSMKRATRSVTDIARVFKGFCDQLHTIGRLVDNPD 163
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 123 bits (309), Expect = 3e-26
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 4/149 (2%)
Frame = +3
Query: 150 VTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITV----GNVSSPNPEFETW 317
VT+KL +NYL+W Q LL K + FV+G TPPPRT+ V +V NP++E+W
Sbjct: 17 VTLKLNDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTLNVVTGDTSVDVANPQYESW 76
Query: 318 SNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQSSKK 497
DQ+++ +L TL+EE + + TS+ +W +LA FN+SS ARE L+ LQ K
Sbjct: 77 FCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNKSSVAREFTLRRTLQLLSK 136
Query: 498 GDRSVSEYGLFFKNLCDQLASMGRPVDET 584
D+++S Y F +CD L+S+G+PVDE+
Sbjct: 137 KDKTLSAYCREFIAVCDALSSIGKPVDES 165
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 122 bits (307), Expect = 6e-26
Identities = 67/149 (44%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Frame = +3
Query: 150 VTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGN--VSS--PNPEFETW 317
VT+KL +NYL+W Q LL +QK + FV+G TPP +T V N V+S PNP++E W
Sbjct: 17 VTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQYEDW 76
Query: 318 SNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQSSKK 497
DQ+V+ +L TL+EE + + TS+ +W +LA FN+SS ARE L+ LQ K
Sbjct: 77 FCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQLLTK 136
Query: 498 GDRSVSEYGLFFKNLCDQLASMGRPVDET 584
D+S+S Y FK +CD L+S+G+PV+E+
Sbjct: 137 KDKSLSVYCRDFKIICDSLSSIGKPVEES 165
>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 122 bits (306), Expect = 7e-26
Identities = 67/149 (44%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Frame = +3
Query: 150 VTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGN--VSS--PNPEFETW 317
VT+KL +NYL+W Q LL +QK + FV+G TPP +T V N V+S PNP++E W
Sbjct: 17 VTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQYEDW 76
Query: 318 SNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQSSKK 497
DQ+V+ +L TL+EE + + TS+ +W +LA FN+SS ARE L+ LQ K
Sbjct: 77 FCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQLLTK 136
Query: 498 GDRSVSEYGLFFKNLCDQLASMGRPVDET 584
D+S+S Y FK +CD L+S+G+PV+E+
Sbjct: 137 KDKSLSLYCRDFKIICDSLSSIGKPVEES 165
>gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]
Length = 361
Score = 122 bits (306), Expect = 7e-26
Identities = 67/149 (44%), Positives = 96/149 (64%), Gaps = 4/149 (2%)
Frame = +3
Query: 150 VTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGN--VSS--PNPEFETW 317
VT+KL +NYL+W Q LL +QK + FV+G TPP +T V N V+S PNP++E W
Sbjct: 82 VTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQYEDW 141
Query: 318 SNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQSSKK 497
DQ+V+ +L TL+EE + + TS+ +W +LA FN+SS ARE L+ LQ K
Sbjct: 142 FCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQLLTK 201
Query: 498 GDRSVSEYGLFFKNLCDQLASMGRPVDET 584
D+S+S Y FK +CD L+S+G+PV+E+
Sbjct: 202 KDKSLSLYCRDFKIICDSLSSIGKPVEES 230
>gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17104755|gb|AAL34266.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971701|dbj|BAD44515.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971723|dbj|BAD44526.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|110741320|dbj|BAF02210.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 405
Score = 121 bits (304), Expect = 1e-25
Identities = 64/169 (37%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Frame = +3
Query: 90 LMANTSVFDSTIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRT 269
LM + S+ ++P +++ VT+ L + NY++W Q L Q L FV GS P +T
Sbjct: 5 LMEHRSMELYSVPSLNISNCVTVTLTAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQT 64
Query: 270 ITVGNV-----SSPNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATA 434
V ++ +SPNPE+ TW D++VK +L+ + E+ ++V+V C+TS VW ++A
Sbjct: 65 SVVSDIDGSTSASPNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANH 124
Query: 435 FNQSSKARELRLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDE 581
FN+ S +R L+ LQ+ K D+S+ EY K +CDQLAS+G PV E
Sbjct: 125 FNRVSSSRLFELQRRLQNVSKRDKSMDEYLKDLKTICDQLASVGSPVTE 173
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 120 bits (300), Expect = 4e-25
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Frame = +3
Query: 120 TIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRTITVGNV---- 287
++P +++ VT+ L + NY++W Q L Q L FV GS P +T V ++
Sbjct: 5 SVPSLNISNCVTVTLTAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDIDGST 64
Query: 288 -SSPNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKAREL 464
+SPNPE+ TW D++VK +L+ + E+ ++V+V C+TS VW ++A FN+ S +R
Sbjct: 65 SASPNPEYYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHFNRVSSSRLF 124
Query: 465 RLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDE 581
L+ LQ+ K D+S+ EY K +CDQLAS+G PV E
Sbjct: 125 ELQRRLQNVSKRDKSMDEYLKDLKTICDQLASVGSPVTE 163
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 119 bits (298), Expect = 6e-25
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 4/158 (2%)
Frame = +3
Query: 120 TIPLHAMTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRT--ITVGNVSS 293
T+P +++ VT+ L NY++W Q L Q L FV GS + P +T +T NV+S
Sbjct: 5 TVPPLNISNCVTVTLNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQTRSVTHNNVTS 64
Query: 294 --PNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELR 467
PNPEF TW DQ+VK +L+ + E+ ++V+V C TS VW LA FN+ S +R
Sbjct: 65 EEPNPEFYTWHQTDQVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFE 124
Query: 468 LKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDE 581
L+ LQ+ +K D ++ + K++CDQLAS+G PV E
Sbjct: 125 LQRRLQTLEKKDNTMEVFLKDLKHICDQLASVGSPVPE 162
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 119 bits (298), Expect = 6e-25
Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Frame = +3
Query: 138 MTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPP--RTITVGNVSS--PNPE 305
+T VT+KL +NYL+W Q LL +QK + FV+G+ P R + G V+S PNP
Sbjct: 13 VTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPL 72
Query: 306 FETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATAFNQSSKARELRLKDELQ 485
+E+W DQ+V+ +L TL+EE + + TS+ +W +LA FN+SS ARE L+ LQ
Sbjct: 73 YESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQ 132
Query: 486 SSKKGDRSVSEYGLFFKNLCDQLASMGRPVDET 584
K ++ S Y FK +CD L+S+G+PVDE+
Sbjct: 133 LLSKKEKPFSVYCREFKTICDALSSIGKPVDES 165
>gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana]
Length = 1313
Score = 119 bits (297), Expect = 8e-25
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Frame = +3
Query: 105 SVFDSTIPLHA-----MTHMVTIKLKSTNYLMWYGQIYPLLRTQKFLPFVDGSRTPPPRT 269
S+ D +I L++ +++ VT+KL NY + Q L Q L FV+GS PPP T
Sbjct: 117 SMMDQSIQLYSPPVLHISNCVTVKLNEQNYSLKKTQFESFLSGQNLLGFVNGSLKPPPAT 176
Query: 270 ITVGNVSS-----PNPEFETWSNNDQIVKLFLVSTLTEEAMAVIVGCDTSQAVWSALATA 434
N+ PNPE+ TW+ +DQ+V+ +L+ +L E+ M +V C TS VW+ALA
Sbjct: 177 TPFNNIDGLTIEVPNPEYHTWNRSDQVVRAWLLGSLNEDIMQEVVNCATSYQVWNALAQH 236
Query: 435 FNQSSKARELRLKDELQSSKKGDRSVSEYGLFFKNLCDQLASMGRPVDE 581
N+ S +R L+ +LQ+ K D+S+ Y K +C+QLAS+G PV E
Sbjct: 237 CNKVSSSRLFELQRKLQTIDKQDKSMETYLKEIKRVCEQLASIGSPVSE 285