BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00027568
         (526 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   283   2e-74
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   281   7e-74
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus...   269   3e-70
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   248   8e-64
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   246   3e-63
ref|XP_007015597.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_007015596.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_007015595.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_007015594.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_007015593.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_007015592.1| BSD domain (BTF2-like transcription factors,...   224   7e-57
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   222   5e-56
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun...   218   9e-55
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   214   8e-54
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr...   214   1e-53
gb|EXB51046.1| hypothetical protein L484_023748 [Morus notabilis]     214   1e-53
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   214   1e-53
ref|NP_175971.3| probable RNA polymerase II transcription factor...   213   2e-53
ref|XP_002530618.1| TFIIH basal transcription factor complex sub...   213   2e-53
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...   213   3e-53

>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  283 bits (723), Expect = 2e-74
 Identities = 135/174 (77%), Positives = 153/174 (87%)
 Frame = +3

Query: 3   KNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSR 182
           KN+MWSVKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239

Query: 183 AQYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIH 362
           A+YLHST+N+V             VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299

Query: 363 LPDHGLLHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
           LPDHGL  GE K++L+ QYEP++RSFSQ LNQHAAVVLQGRV+DVELGDTRSVA
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVA 353


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score =  281 bits (719), Expect = 7e-74
 Identities = 134/174 (77%), Positives = 153/174 (87%)
 Frame = +3

Query: 3   KNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSR 182
           KN+MWSVKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKYSR
Sbjct: 180 KNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSR 239

Query: 183 AQYLHSTRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIH 362
           A+YLHST+N+V             VFLK+DDML +EARRKIRRVDPT+D+EADEGDDY+H
Sbjct: 240 AEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMH 299

Query: 363 LPDHGLLHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
           LPDHGL  GE K++L+ QYEP++RSFSQ LNQHAAVVL+GRV+DVELGDTRSVA
Sbjct: 300 LPDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVA 353


>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
          Length = 409

 Score =  269 bits (688), Expect = 3e-70
 Identities = 128/171 (74%), Positives = 149/171 (87%)
 Frame = +3

Query: 12  MWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQY 191
           MW+VKPLSDGQSN+VTFNLTPEIIHQIF+EKPAVRQAYLNFVP +++EK+FWTKYS+A+Y
Sbjct: 1   MWTVKPLSDGQSNKVTFNLTPEIIHQIFSEKPAVRQAYLNFVPHRLSEKDFWTKYSKAEY 60

Query: 192 LHSTRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 371
           L+S+RNV              VFLKRDDMLA+EARRK+RRVDPTVD++ADEGDDYIHL D
Sbjct: 61  LNSSRNVSVAAAEAALDEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQD 120

Query: 372 HGLLHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
           HGL+H E KD ++SQYEP+R+SFSQDLNQH AVVLQGRV+D EL DTRSVA
Sbjct: 121 HGLVHDEPKDYMESQYEPFRKSFSQDLNQHGAVVLQGRVLDAELRDTRSVA 171


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  248 bits (632), Expect = 8e-64
 Identities = 117/168 (69%), Positives = 139/168 (82%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH 
Sbjct: 189 LKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHC 248

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           TRN V             VFLK DD+LANEARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 249 TRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGI 308

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+++D QYE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VA
Sbjct: 309 FRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVA 356


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  246 bits (627), Expect = 3e-63
 Identities = 116/168 (69%), Positives = 139/168 (82%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH 
Sbjct: 232 LKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHC 291

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           TRN V             VFLK DD+LA+EARRKIRRVDPT+D+EAD+GDDY+HLPDHG+
Sbjct: 292 TRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGI 351

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+++D QYE YRR+ SQDLN+HAAVVL+GR +DVEL DTR+VA
Sbjct: 352 FRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVA 399


>ref|XP_007015597.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 6 [Theobroma
           cacao] gi|508785960|gb|EOY33216.1| BSD domain (BTF2-like
           transcription factors, Synapse-associated proteins and
           DOS2-like proteins) isoform 6 [Theobroma cacao]
          Length = 467

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 304 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 351


>ref|XP_007015596.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 5,
           partial [Theobroma cacao] gi|508785959|gb|EOY33215.1|
           BSD domain (BTF2-like transcription factors,
           Synapse-associated proteins and DOS2-like proteins),
           putative isoform 5, partial [Theobroma cacao]
          Length = 481

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 304 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 351


>ref|XP_007015595.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 4, partial
           [Theobroma cacao] gi|508785958|gb|EOY33214.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 4, partial
           [Theobroma cacao]
          Length = 516

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 140 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 199

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 200 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 259

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 260 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 307


>ref|XP_007015594.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 3 [Theobroma
           cacao] gi|508785957|gb|EOY33213.1| BSD domain (BTF2-like
           transcription factors, Synapse-associated proteins and
           DOS2-like proteins) isoform 3 [Theobroma cacao]
          Length = 549

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 304 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 351


>ref|XP_007015593.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 2, partial
           [Theobroma cacao] gi|508785956|gb|EOY33212.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 2, partial
           [Theobroma cacao]
          Length = 505

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 140 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 199

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 200 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 259

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 260 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 307


>ref|XP_007015592.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 1
           [Theobroma cacao] gi|508785955|gb|EOY33211.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 1
           [Theobroma cacao]
          Length = 646

 Score =  224 bits (572), Expect = 7e-57
 Identities = 107/168 (63%), Positives = 136/168 (80%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPDHG+
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               +K+V +S+ E YRR+ SQD+N+HAAVVL+GR VDVEL DTRSVA
Sbjct: 304 FRDGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVA 351


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
           gi|548861733|gb|ERN19104.1| hypothetical protein
           AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  222 bits (565), Expect = 5e-56
 Identities = 108/168 (64%), Positives = 134/168 (79%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           V+PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L FVP KM+E++FWTKY RA+YLH 
Sbjct: 193 VRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYCRAEYLHR 252

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK DD+LA+EARRKIRRVDPTVD+ AD GDDY HLP HG+
Sbjct: 253 TKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLPGHGI 312

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
           L   +K+ +DS+ E  +R+  QDLN+HAAVVL+GR +DVELGDTR+VA
Sbjct: 313 LRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVA 360


>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
           gi|462419824|gb|EMJ24087.1| hypothetical protein
           PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  218 bits (554), Expect = 9e-55
 Identities = 107/167 (64%), Positives = 128/167 (76%)
 Frame = +3

Query: 24  KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 203
           KP++DG+ N+VTFNLTPEI +QIFA KPAV QA+L  VP KMTEK+FWTKY RA+YLHST
Sbjct: 159 KPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHST 218

Query: 204 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 383
           RN V             +FLK D +LA+EARRKIRRVDPT+D+EAD+GDDY HLPDHG+ 
Sbjct: 219 RNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIF 278

Query: 384 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
              +KDV + Q E YRR+ SQDLN+  AVVLQGR VDV+L D R+VA
Sbjct: 279 RDGSKDVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVA 325


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  214 bits (546), Expect = 8e-54
 Identities = 104/168 (61%), Positives = 129/168 (76%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+S
Sbjct: 184 IKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N               VFLK D++LA E R+KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 244 TKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
                 DV++ Q + +RRS  QDLN+HAAVVL+GR +DVE  DTR VA
Sbjct: 304 QRDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVA 351


>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
           gi|557089185|gb|ESQ29893.1| hypothetical protein
           EUTSA_v10011333mg [Eutrema salsugineum]
          Length = 597

 Score =  214 bits (545), Expect = 1e-53
 Identities = 104/168 (61%), Positives = 130/168 (77%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++NRVTFNLT EII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+S
Sbjct: 185 IKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYS 244

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N               VFLK D++LA E R+KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 245 TKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYSHLMDHGI 304

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
                KDV++SQ + +RRS  QDLN+H+AVVL+GR +DVE  DTR VA
Sbjct: 305 QRDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVA 352


>gb|EXB51046.1| hypothetical protein L484_023748 [Morus notabilis]
          Length = 557

 Score =  214 bits (544), Expect = 1e-53
 Identities = 101/167 (60%), Positives = 128/167 (76%)
 Frame = +3

Query: 24  KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 203
           KP++DG++N+VTFNLTPEI +QIF  KPAV QA+LN VP KMTEK+FWTKY RA+YLHST
Sbjct: 159 KPMADGRTNKVTFNLTPEIKYQIFVLKPAVHQAFLNLVPSKMTEKDFWTKYFRAEYLHST 218

Query: 204 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 383
           +N +             +FLK D++LA EARRKIRRVDPT+D+EAD GDDY HLPDHG+ 
Sbjct: 219 KNAITVAAEAAEDEELAIFLKEDNILAREARRKIRRVDPTLDMEADLGDDYTHLPDHGIF 278

Query: 384 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
               K++ ++Q+E Y R+ SQDLN+  AVVL+GR VDV+L D R+VA
Sbjct: 279 RDGTKEISETQHEQYMRTLSQDLNRQGAVVLEGRTVDVDLEDPRTVA 325


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
           gi|482575779|gb|EOA39966.1| hypothetical protein
           CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  214 bits (544), Expect = 1e-53
 Identities = 103/168 (61%), Positives = 130/168 (77%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP KMTEK+FWTKY RA+YL+S
Sbjct: 184 IKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYFRAEYLYS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N               VFLK D++LA E R+KIRRVDPT+D+EADEGDDY HL DHG+
Sbjct: 244 TKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
                +DV++ Q E ++RS  QDLN+HAAVVL+GR +DV+  DTR VA
Sbjct: 304 QRDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVA 351


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
           [Arabidopsis thaliana]
           gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| probable RNA polymerase II
           transcription factor B subunit 1-1 [Arabidopsis
           thaliana]
          Length = 591

 Score =  213 bits (542), Expect = 2e-53
 Identities = 103/168 (61%), Positives = 128/168 (76%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY RA+YL+S
Sbjct: 184 IKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYS 243

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N               VFLK D++LA E R KIRRVDPT+D+EAD+GDDY HL DHG+
Sbjct: 244 TKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGI 303

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
                 DV++ Q + ++RS  QDLN+HAAVVL+GR +DVE  DTR VA
Sbjct: 304 QRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVA 351


>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
           communis] gi|223529828|gb|EEF31761.1| TFIIH basal
           transcription factor complex subunit, putative [Ricinus
           communis]
          Length = 597

 Score =  213 bits (542), Expect = 2e-53
 Identities = 102/168 (60%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
 Frame = +3

Query: 24  KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 203
           KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL+ VP KM+E++FWTKY RA+YL  +
Sbjct: 185 KPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEYLQRS 244

Query: 204 RNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGLL 383
           RN+              +FLK DD+LA+E R+KIR VDPT+D+EAD+GDDY HLPDHG++
Sbjct: 245 RNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIV 304

Query: 384 HGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVE-LGDTRSVA 524
              +KDV++SQ+EPYRR+  QDLN+HAAVVL+G  +D E L DT++VA
Sbjct: 305 RDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVA 352


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Oryza brachyantha]
          Length = 621

 Score =  213 bits (541), Expect = 3e-53
 Identities = 103/168 (61%), Positives = 132/168 (78%)
 Frame = +3

Query: 21  VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 200
           V+P +DG++N+VTF+LT EIIHQIFAEKPAV +A+LNFVP+KM+EK+FWTKY RA+YL  
Sbjct: 211 VRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLNFVPKKMSEKDFWTKYFRAEYLLR 270

Query: 201 TRNVVXXXXXXXXXXXXXVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPDHGL 380
           T+N V             VFLK DD+LA EAR KI+RVDPT+D+EAD GDDYIHLPDHG+
Sbjct: 271 TKNTVAAAAEAAEDEELAVFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGI 330

Query: 381 LHGEAKDVLDSQYEPYRRSFSQDLNQHAAVVLQGRVVDVELGDTRSVA 524
           +   +K+ +++  E  RR+ SQDLN+HAAVVL+GR  DVEL DT++VA
Sbjct: 331 IRDGSKETIENDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVA 378