BLASTX nr result
ID: Mentha23_contig00027545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00027545
(426 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 69 9e-10
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 62 6e-08
ref|XP_006665123.1| PREDICTED: uncharacterized protein LOC102713... 62 8e-08
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 62 8e-08
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 62 1e-07
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 60 2e-07
ref|XP_003560991.1| PREDICTED: ABC transporter C family member 1... 59 5e-07
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 59 5e-07
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 59 5e-07
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255... 59 7e-07
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 59 7e-07
ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664... 58 1e-06
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 57 2e-06
ref|XP_006663341.1| PREDICTED: uncharacterized protein LOC102709... 57 3e-06
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 57 3e-06
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 56 4e-06
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera] 55 8e-06
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/107 (32%), Positives = 52/107 (48%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQ+C GH A +CWHRF+ F P+ N SS
Sbjct: 311 RPQCQICCKIGHVATECWHRFDNQFQPKASHS--------------NQFSSSAQDPQALM 356
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
E W+ D+GAT+HV++DLANL++ + + G +++ + NG G
Sbjct: 357 AAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKG 403
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/107 (31%), Positives = 51/107 (47%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQ+C GHTA CW+RF+ ++VP Q N + S++P
Sbjct: 279 RPRCQVCSRVGHTALNCWYRFDENYVP----------DQRSANSAAHQNGSNVP------ 322
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
WY D+GAT+H++ DL L + +Y G +++ NG G
Sbjct: 323 ----------WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTG 359
>ref|XP_006665123.1| PREDICTED: uncharacterized protein LOC102713872, partial [Oryza
brachyantha]
Length = 625
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/107 (29%), Positives = 51/107 (47%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQ+CF TGHT +CWHRF+ ++ P + M Q ++
Sbjct: 287 RPICQVCFKTGHTTLECWHRFDENYAPEER------------HVAAAMNQYAM------- 327
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
+ WY DSGAT+++++DL L + Y G +++ +G G
Sbjct: 328 -------DQNWYLDSGATDNITSDLEKLAVRDRYYGDDQIHTASGAG 367
>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1180
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/106 (29%), Positives = 47/106 (44%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
+RP CQLC+ GHT CW+R++ FVP + N
Sbjct: 273 NRPKCQLCYKRGHTVIDCWYRYDEDFVPDEKYAGTAASYGVDSN---------------- 316
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
WY D+GAT+H++ +L L I +Y+G +++Q NG
Sbjct: 317 -----------WYVDTGATDHITGELEKLTIRDKYKGQDQVQAANG 351
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/108 (31%), Positives = 50/108 (46%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
+RPTCQLC GHT KCW RF+ F + N+A SS
Sbjct: 190 NRPTCQLCGKIGHTVHKCWKRFDASFTGE--------------DKSANVAASS------- 228
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
+ WY DSGAT+H++++L L + +Y G +++ +G G
Sbjct: 229 -----YEVDTNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSG 271
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/105 (29%), Positives = 45/105 (42%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQLC+ GHT CW+R++ FVP + N
Sbjct: 271 RPKCQLCYKRGHTVIDCWYRYDEDFVPDEKYAGTTASYGVDSN----------------- 313
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
WY D+G T+HV+ +L L I +Y+G +++Q NG
Sbjct: 314 ----------WYVDTGTTDHVTGELEKLTIRDKYKGQDQVQTANG 348
>ref|XP_003560991.1| PREDICTED: ABC transporter C family member 13-like [Brachypodium
distachyon]
Length = 2064
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQ---SSIPXXX 152
RP CQ+C GH A C+ RF+ F+ N G A +S P
Sbjct: 245 RPVCQICSKIGHPASCCFKRFQKIFLGTGNDGRNMDRQLAALNDGATAAYHVGTSTPSYP 304
Query: 151 XXXXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
+ WY D+ AT+H SNDL LNI +Y G + +Q NG G
Sbjct: 305 V---------DPYWYADTAATDHFSNDLNKLNIKEQYHGKDTVQTANGSG 345
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHF-VPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXX 149
++P CQLC GH +C++RF+ F VP+ N S P
Sbjct: 306 EKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSR---------NSSPRAYYSFSPQVNG 356
Query: 148 XXXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
S+ WYPDSGA+NHV+ + NL ++E+ G N++ + NG G
Sbjct: 357 VIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTG 405
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
++P CQ+C GH+AD+C++R++P F +P + + P
Sbjct: 278 EKPVCQVCMKIGHSADRCYYRYDPSF---QGPHTPGFTPSFQKSPQTQIQGGNKPNMQVL 334
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMEN 11
+ WYPDSGA+NHV+ + NL + Y G ++++ N
Sbjct: 335 MATPENICDTNWYPDSGASNHVTTNANNLVEHTPYYGNEQVRVGN 379
>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
lycopersicum]
Length = 318
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/106 (33%), Positives = 50/106 (47%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
+RP CQ+C H A C++R+ + P P N+A SS
Sbjct: 210 NRPLCQICEKLDHLAKNCYNRYNDQYPPTNTP-----------RPQANVATSS------- 251
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
+ +W DSGATNHV+ D+ NL+IAS+Y G + L + NG
Sbjct: 252 ----SAFLDPSWCLDSGATNHVTADVGNLSIASDYSGNDSLAVGNG 293
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/108 (27%), Positives = 49/108 (45%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
+RP CQ+C+ GH A CWHRF+ FVP + ++I
Sbjct: 406 NRPLCQVCYKRGHVAADCWHRFDEDFVPDD-----------------KLVAAAI------ 442
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
+ WY D+GAT+H++++L L Y+G +++ +G G
Sbjct: 443 ---HTHARDSNWYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSG 487
>ref|XP_006605035.1| PREDICTED: uncharacterized protein LOC102664868 [Glycine max]
Length = 471
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/105 (31%), Positives = 50/105 (47%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQLC GH A CW R P NP ++ Q+++
Sbjct: 278 RPICQLCSKPGHEAINCWQRTNQTDYPSRRA-----------NPRVSSRQANVAQTGTSS 326
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
+ +WY D+GAT+HV+ D++ L IA++Y ++LQ+ NG
Sbjct: 327 IVM----DPSWYFDTGATDHVTPDISKLTIANDYTDDDKLQVGNG 367
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP C +C+ GH A CWHR++ +VP Y+ G
Sbjct: 175 RPLCHVCYKRGHVAANCWHRYDEDYVP-----DDKLVAAATYSHG--------------- 214
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
++ WY D+GAT+H+++ L LN Y+G +++ +G G
Sbjct: 215 ------ADSNWYVDTGATDHITSQLEKLNTREVYKGHDQIHTASGAG 255
>ref|XP_006663341.1| PREDICTED: uncharacterized protein LOC102709037 [Oryza brachyantha]
Length = 344
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/107 (27%), Positives = 44/107 (41%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RP CQLC+ GHT CW+R++ FVP N
Sbjct: 40 RPKCQLCYKRGHTVINCWYRYDEDFVPDEKYAGSATSYGTDSN----------------- 82
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
WY D+GA++HV+ +L L + Y+G +++ +G G
Sbjct: 83 ----------WYVDTGASDHVTGELEKLTVRDRYKGHDQVHTASGVG 119
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYN-PGLNMAQSSIPXXXX 149
++P CQLC GHTA C+HRF+ F N P + + S+ P
Sbjct: 285 EKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVASASNNPA--- 341
Query: 148 XXXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
+ +WY DSGA++H++ +L NL S Y G +++ + NG
Sbjct: 342 ---------DESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNG 379
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/107 (28%), Positives = 44/107 (41%)
Frame = -3
Query: 322 RPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXXX 143
RPTCQLC GH CWH ++ FV P +A ++
Sbjct: 273 RPTCQLCSKVGHVVADCWHCYDDSFV-----------------PDARVAAAA-------- 307
Query: 142 XXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENGYG 2
+ WY D+GAT+H++N+L L Y G ++ +G G
Sbjct: 308 ---SYGVDSNWYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSG 351
>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
Length = 1635
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/106 (28%), Positives = 50/106 (47%)
Frame = -3
Query: 325 DRPTCQLCFITGHTADKCWHRFEPHFVPRXXXXXXXXXXQMPYNPGLNMAQSSIPXXXXX 146
++P CQLC GHT C+HRF+ + P + +A S+
Sbjct: 181 EKPQCQLCGKFGHTVQICYHRFDISYQSSQSINTSPSNAGNPNSIPAMVASSN------- 233
Query: 145 XXXXXXXSEHTWYPDSGATNHVSNDLANLNIASEYRGPNRLQMENG 8
++ TWY DSGA++H++ + NL +S Y G +++ + NG
Sbjct: 234 -----NLADDTWYLDSGASHHLTQSVGNLTSSSPYTGTDKVTIGNG 274