BLASTX nr result

ID: Mentha23_contig00027537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00027537
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10

>ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X1 [Solanum tuberosum]
           gi|565380524|ref|XP_006356648.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Solanum tuberosum]
          Length = 629

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = +1

Query: 76  IEKFDREKGNLETNSTKQGSSLAKHVQDL-PFN--DTSLDEKLHFHPMPESTLCTICTGG 246
           ++ F +E+ N E +  K G       + L PF+  +  LD+K+   P PES+LC  C  G
Sbjct: 1   MDDFRKERSNCEKSRRKSGMKTLIRKELLHPFSIKEKDLDDKMPLQPTPESSLCAFCVNG 60

Query: 247 ESCKIVRSRTKLMNILLERGKP 312
            SC+ VR+RTKLMN +LERG+P
Sbjct: 61  NSCRTVRARTKLMNTVLERGRP 82


>ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Solanum lycopersicum]
          Length = 629

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = +1

Query: 76  IEKFDREKGNLETNSTKQGSSLAKHVQDL-PFN--DTSLDEKLHFHPMPESTLCTICTGG 246
           ++ F +E+ N E +  K G       + L PF+  +  L++K+   P PES+LC  C  G
Sbjct: 1   MDDFRKERSNCENSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRPTPESSLCAFCVNG 60

Query: 247 ESCKIVRSRTKLMNILLERGKP 312
            SC+ VR+RTKLMN +LERG+P
Sbjct: 61  NSCRTVRARTKLMNTVLERGRP 82


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