BLASTX nr result

ID: Mentha23_contig00026010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00026010
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera...    69   7e-10
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...    67   3e-09
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...    67   3e-09
gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Mimulus...    67   3e-09
ref|XP_002308874.2| transcription elongation factor-related fami...    65   1e-08
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera...    64   3e-08
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr...    64   3e-08
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera...    63   5e-08
gb|ACU24154.1| unknown [Glycine max]                                   63   5e-08
ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera...    62   6e-08
ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymera...    62   1e-07
ref|XP_007202053.1| hypothetical protein PRUPE_ppa005771mg [Prun...    62   1e-07
ref|XP_007145438.1| hypothetical protein PHAVU_007G239100g [Phas...    61   2e-07
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250...    61   2e-07
gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Mimulus...    60   2e-07

>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 455

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           EMLFTCKV  CFGC++ +LAVP  G D     E K+KS+ + GGS   KESKVNS     
Sbjct: 50  EMLFTCKVTMCFGCEKVDLAVPIAGND----DEGKIKSKDEFGGS---KESKVNS----- 97

Query: 132 EDDHREVMEMNTR---NYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
             DH +V EMN     NYS G+            E+Q + EV+RIKD
Sbjct: 98  RIDHHDV-EMNVNQVSNYSYGE--AEALTEEMEEETQTFGEVMRIKD 141


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|550320725|gb|EEF04988.2| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 23/127 (18%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPG-----------------GGGDGFEKSEDKLKSEVDGG 184
           E LF+C++IKC GC++ ELAVPG                 G   G +  E+++  ++D G
Sbjct: 48  ERLFSCRLIKCSGCNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDG 107

Query: 183 GSK----DTKESKVNSSSRDYEDDHRE--VMEMNTRNYSNGDXXXXXXXXXXXXESQFYE 22
           G +     +KESKVNSS+RD + D+ E  V +    N+S G+             SQ  +
Sbjct: 108 GFEYEGGGSKESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGE--AEALTDEIEEVSQTVD 165

Query: 21  EVLRIKD 1
           EVLRIKD
Sbjct: 166 EVLRIKD 172


>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|222867860|gb|EEF04991.1| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 23/127 (18%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPG-----------------GGGDGFEKSEDKLKSEVDGG 184
           E LF+C++IKC GC++ ELAVPG                 G   G +  E+++  ++D G
Sbjct: 48  ERLFSCRLIKCSGCNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDG 107

Query: 183 GSK----DTKESKVNSSSRDYEDDHRE--VMEMNTRNYSNGDXXXXXXXXXXXXESQFYE 22
           G +     +KESKVNSS+RD + D+ E  V +    N+S G+             SQ  +
Sbjct: 108 GFEYEGGGSKESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGE--AEALTDEIEEVSQTVD 165

Query: 21  EVLRIKD 1
           EVLRIKD
Sbjct: 166 EVLRIKD 172


>gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Mimulus guttatus]
          Length = 413

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           EMLFTCK  KCFGCDR EL+VP     G  KS         GGG  D  + K        
Sbjct: 52  EMLFTCKSTKCFGCDRIELSVPPCAAVGSTKS--------GGGGDCDDNQLK-------N 96

Query: 132 EDDHREVMEMNTRNYSN---GDXXXXXXXXXXXXESQFYEEVLRIKD 1
           +D HREVM MN    S+   GD            E+Q +EEV+RIK+
Sbjct: 97  DDYHREVMVMNVNQISDNSYGDDDVVLLTDLIDEENQLFEEVVRIKE 143


>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
           trichocarpa] gi|550335369|gb|EEE92397.2| transcription
           elongation factor-related family protein [Populus
           trichocarpa]
          Length = 483

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 30/134 (22%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPG------------------------GGGDGFEKSEDKL 205
           E LF+C++IKC GC+R ELAVPG                        GGGD  +  +D +
Sbjct: 48  ERLFSCRLIKCSGCNRVELAVPGHDEGVSDDGGCCSKRRDGDNSGGVGGGDD-DDDDDDV 106

Query: 204 KSEVDGGGSK----DTKESKVNSSSRDYEDDHRE--VMEMNTRNYSNGDXXXXXXXXXXX 43
             ++D GG +     +K SKVNSS+RD + D+ E  V +    N+S GD           
Sbjct: 107 DIDIDDGGFEYEGGGSKGSKVNSSNRDNDIDNGEVNVNDQLVYNFSYGD--AEALTDEIE 164

Query: 42  XESQFYEEVLRIKD 1
             SQ  +EVLRIKD
Sbjct: 165 EVSQTVDEVLRIKD 178


>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Citrus sinensis]
          Length = 448

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLK---SEVDGGGSKDTKESKVNSSS 142
           E LFTCK+ +C GCDR ELAVP   G+ F+  E+  K    E + GGS   KESKVNS  
Sbjct: 50  EKLFTCKLTRCSGCDRVELAVP--SGNEFDDDEEDCKRDGCEFEAGGS---KESKVNSC- 103

Query: 141 RDYEDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
               DDH  V      N+S+GD            ESQ   EVLRIK+
Sbjct: 104 ---RDDH--VSNQIVSNFSSGD-IAEALTDEIEEESQVVGEVLRIKE 144


>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
           gi|557532580|gb|ESR43763.1| hypothetical protein
           CICLE_v10011717mg [Citrus clementina]
          Length = 448

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLK---SEVDGGGSKDTKESKVNSSS 142
           E LFTCK+ +C GCDR ELAVP   G+ F+  E+  K    E + GGS   KESKVNS  
Sbjct: 50  EKLFTCKLTRCSGCDRVELAVP--SGNEFDDDEEDCKRDGCEFEAGGS---KESKVNSC- 103

Query: 141 RDYEDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
               DDH  V      N+S+GD            ESQ   EVLRIK+
Sbjct: 104 ---RDDH--VSNQIVSNFSSGD-IAEALTDEIEEESQVVGEVLRIKE 144


>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X1 [Glycine max]
           gi|571440343|ref|XP_006575125.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26b-like isoform X2 [Glycine max]
          Length = 453

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/116 (42%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVP-----GGGGD----GFEKSEDKLKSEVDGGGSKDTKES 160
           E LF+C++ +C GC+R ELAVP      GGG+    GF+   D+ K E        +KES
Sbjct: 50  ERLFSCRLSRCLGCERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFEAGA-----SKES 104

Query: 159 KVNSSSRDYEDDHREVMEMNTR---NYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
           KVN S+RDY        EMNT    NYS G+            ESQ+ EEV RIKD
Sbjct: 105 KVN-SARDYPG------EMNTNQVSNYSYGE--AEALTDEIEKESQYVEEVFRIKD 151


>gb|ACU24154.1| unknown [Glycine max]
          Length = 336

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/116 (42%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVP-----GGGGD----GFEKSEDKLKSEVDGGGSKDTKES 160
           E LF+C++ +C GC+R ELAVP      GGG+    GF+   D+ K E        +KES
Sbjct: 50  ERLFSCRLSRCLGCERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFEAGA-----SKES 104

Query: 159 KVNSSSRDYEDDHREVMEMNTR---NYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
           KVN S+RDY        EMNT    NYS G+            ESQ+ EEV RIKD
Sbjct: 105 KVN-SARDYPG------EMNTNQVSNYSYGE--AEALTDEIEKESQYVEEVFRIKD 151


>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum tuberosum]
          Length = 455

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           EMLFTCKV  CFGC++ +LAVP    D     E K+KS+ + G S   KESK NS     
Sbjct: 50  EMLFTCKVTMCFGCEKVDLAVPIASND----DEGKIKSKDEFGVS---KESKANS----- 97

Query: 132 EDDHREVMEMNTR---NYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
             DH +V EMN     NYS G+            E+Q + EV+RIKD
Sbjct: 98  RIDHHDV-EMNVNQVSNYSYGE--AEALTEEMEEETQIFGEVMRIKD 141


>ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Fragaria vesca subsp. vesca]
          Length = 458

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/104 (42%), Positives = 61/104 (58%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           E+LF+C++ +C GC++ EL VP   G+G E  +        GGG+  +KESKVNS+SRD 
Sbjct: 56  ELLFSCRMSRCSGCEKVELVVPCDHGEGDEGVDGSGGDGDFGGGA--SKESKVNSTSRD- 112

Query: 132 EDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
            DD  +VM+ N  NY   +            ESQ +EEVLRIK+
Sbjct: 113 -DD--QVMK-NDSNYGLAE----ALTDEIEEESQVFEEVLRIKE 148


>ref|XP_007202053.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
           gi|462397584|gb|EMJ03252.1| hypothetical protein
           PRUPE_ppa005771mg [Prunus persica]
          Length = 444

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGD------GFEKSEDKLKSEVDGGGSKDTKESKVN 151
           E LF+C++ +C GCD+ ELAVPGG G+      G +   D+   EV+ G S   KESKVN
Sbjct: 50  ERLFSCRLTRCSGCDKMELAVPGGDGEDDDDDGGCKSGFDRDGGEVEAGAS---KESKVN 106

Query: 150 SSSRDYEDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
           SS     DD  E+      NYS G             ES+   EV RIK+
Sbjct: 107 SS----RDDQGEMNMNQLSNYSYG--LAEALTAEIEEESEIVGEVFRIKE 150


>ref|XP_007145438.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
           gi|561018628|gb|ESW17432.1| hypothetical protein
           PHAVU_007G239100g [Phaseolus vulgaris]
          Length = 457

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 46/114 (40%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAV----PGGGGDGFEKSEDKLKSEVDGGGSK------DTKE 163
           E LF+C++ +C GC+R ELAV     GG G G        KS VDG G++       +KE
Sbjct: 51  ERLFSCRLSRCLGCERVELAVSVDDDGGEGGG------GCKSGVDGAGAEFESEAGASKE 104

Query: 162 SKVNSSSRDYEDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
           SKVNS+    +DD  E+      NYS G+            ESQ+ EEV RIKD
Sbjct: 105 SKVNSAR---DDDPGEMNTNRVSNYSYGE--AEALTDEIEEESQYVEEVFRIKD 153


>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
          Length = 521

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/104 (39%), Positives = 52/104 (50%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           E LF+CK+ +CFGCDR ELAVP   G G        K E D   +  +KESK NS     
Sbjct: 50  ERLFSCKLTRCFGCDRVELAVPENDGGG-------CKIEFDMDVNSSSKESKANS----I 98

Query: 132 EDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
            +DH E+      NYS G+            E+Q   EVLRI++
Sbjct: 99  REDHGEMNMNQVSNYSYGE--AEALTDEIEEETQIAGEVLRIRE 140


>gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Mimulus guttatus]
          Length = 433

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 44/104 (42%), Positives = 51/104 (49%)
 Frame = -3

Query: 312 EMLFTCKVIKCFGCDRAELAVPGGGGDGFEKSEDKLKSEVDGGGSKDTKESKVNSSSRDY 133
           EMLF CK+ KCFGCDR ELAVP   G   EKSED    E D            +    D 
Sbjct: 51  EMLFACKMTKCFGCDRIELAVP--NGVVLEKSEDDNTREGD------------DDDDVDD 96

Query: 132 EDDHREVMEMNTRNYSNGDXXXXXXXXXXXXESQFYEEVLRIKD 1
           + D RE+   +  NYS GD            ESQ + EVLRIK+
Sbjct: 97  DVDGREMNVNHVSNYSYGD--AEALTDEIEEESQLFGEVLRIKE 138


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