BLASTX nr result

ID: Mentha23_contig00025865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00025865
         (464 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subc...    57   3e-12
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    77   3e-12
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          77   3e-12
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]      57   6e-12
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...    74   2e-11
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]      74   2e-11
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    73   5e-11
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      73   5e-11
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      72   6e-11
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    70   2e-10
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    69   7e-10
emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]    58   1e-09
emb|CAE05252.2| OSJNBb0115I09.14 [Oryza sativa Japonica Group]         60   3e-09
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...    66   4e-09
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    66   4e-09
emb|CAN75475.1| hypothetical protein VITISV_006889 [Vitis vinifera]    57   7e-09
emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera]    55   9e-09
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa...    65   1e-08
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]    55   3e-08
emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]    55   4e-08

>gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 815

 Score = 57.4 bits (137), Expect(2) = 3e-12
 Identities = 27/72 (37%), Positives = 42/72 (58%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG    R +  GE  +RV NG     E +G + L L +G  L LH+  +VPS++RN++S+
Sbjct: 263 QGFHTRRMLARGERCIRVANGVEAEVEAIGEYPLKLNNGFTLYLHNVLYVPSLSRNLVSV 322

Query: 425 PLLDMDGFHFHF 460
             L  DG++ +F
Sbjct: 323 SCLADDGYNCYF 334



 Score = 39.7 bits (91), Expect(2) = 3e-12
 Identities = 12/32 (37%), Positives = 24/32 (75%)
 Frame = +1

Query: 121 PKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 216
           P+   + + ++ +D C +C+QKGH+++DCP+F
Sbjct: 214 PQVDPNPRQEVERDACRWCKQKGHFQKDCPEF 245


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/69 (52%), Positives = 50/69 (72%)
 Frame = +2

Query: 248 GLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISIP 427
           G+++S  +  G+VDLR+ NGARV+   VGT+ L  PSG  L L +CY+V +I +NIIS+ 
Sbjct: 75  GINNSITMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVS 134

Query: 428 LLDMDGFHF 454
            LDM+GFHF
Sbjct: 135 CLDMEGFHF 143


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  GEVD+RVGNGARVA   VGT  L LPSG  L L++CY +P++ +
Sbjct: 271 ICKSLQGLKRSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCK 330

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 331 NVISASCLQAEGYGF 345


>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1358

 Score = 57.0 bits (136), Expect(2) = 6e-12
 Identities = 27/61 (44%), Positives = 37/61 (60%)
 Frame = +2

Query: 281 EVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISIPLLDMDGFHFHF 460
           E  +RV NG     E VG   L+L +G  L+L D ++VPS+ RN+IS+  LD DG+   F
Sbjct: 297 ESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFYVPSLQRNLISVSKLDFDGYDCRF 356

Query: 461 G 463
           G
Sbjct: 357 G 357



 Score = 38.9 bits (89), Expect(2) = 6e-12
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +1

Query: 151 ISKDQCVFCRQKGHWKRDCPKF 216
           + KDQC+ C++ GH+K+DCP F
Sbjct: 259 VEKDQCLHCKKTGHYKKDCPDF 280


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  GEVD+RVGNGARVAA  VGT  L LPSG  L L++CY + ++ +
Sbjct: 364 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCK 423

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 424 NVISASCLQAEGYGF 438


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  GEVD+RVGNGARVAA  VGT  L LPSG  L L++CY + ++ +
Sbjct: 291 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCK 350

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 351 NVISASCLQAEGYGF 365


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  G VD+RVGNG RVA   VGT  L LPSG  L L++CY +P++ +
Sbjct: 404 ICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCK 463

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 464 NVISASCLQAEGYGF 478


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  G VD+RVGNG RVA   VGT  L LPSG  L L++CY +P++ +
Sbjct: 404 ICKSLQGLKRSRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCK 463

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 464 NVISASCLQAEGYGF 478


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/73 (50%), Positives = 49/73 (67%)
 Frame = +2

Query: 236 RQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNI 415
           +  QG+  SR +R GEV+LRVGNGA VA   VGT  L LPSG  L L++CY VP++ +N+
Sbjct: 314 KSLQGMRRSRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNV 373

Query: 416 ISIPLLDMDGFHF 454
           IS   L  +G+ F
Sbjct: 374 ISASCLQAEGYDF 386


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/75 (48%), Positives = 49/75 (65%)
 Frame = +2

Query: 230 LLRQAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITR 409
           + +  QGL  SR +  GEVD+RVGNGARVAA  VGT  L LPS   L L++ Y +P++ +
Sbjct: 288 ICKSLQGLKRSRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCK 347

Query: 410 NIISIPLLDMDGFHF 454
           N+IS   L  +G+ F
Sbjct: 348 NVISASCLQAEGYGF 362


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           Q L+ +R+V  GE+DLRVGN A+VAA    T  L LPSG  + L++CY+VP+++RNIIS 
Sbjct: 405 QSLTKNRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIISA 464

Query: 425 PLLDMDGFHF 454
             L  +G+ F
Sbjct: 465 SCLMTEGYKF 474


>emb|CAN67912.1| hypothetical protein VITISV_004101 [Vitis vinifera]
          Length = 1012

 Score = 58.2 bits (139), Expect(2) = 1e-09
 Identities = 30/73 (41%), Positives = 41/73 (56%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG   S+K+  GE  + +GNG  V  E +G+  L L  G  + L D  +VP  TRN+IS+
Sbjct: 274 QGYLTSKKLSKGERTITLGNGIEVEIEAIGSLHLILDIGFIMDLVDTIYVPVFTRNLISV 333

Query: 425 PLLDMDGFHFHFG 463
           P LD  G+   FG
Sbjct: 334 PRLDSYGYELKFG 346



 Score = 30.0 bits (66), Expect(2) = 1e-09
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 154 SKDQCVFCRQKGHWKRDCPKF 216
           +K QC FC +KGH  RDC  F
Sbjct: 224 NKIQCHFCHKKGHKIRDCSGF 244


>emb|CAE05252.2| OSJNBb0115I09.14 [Oryza sativa Japonica Group]
          Length = 853

 Score = 60.5 bits (145), Expect(2) = 3e-09
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG    R +R GE  LRV +GA +    VG   L L SG+ L+LHD  + PS+ RN+IS+
Sbjct: 376 QGFRSVRTLRKGERILRVADGAEIKVMAVGELHLRLLSGNNLLLHDVLYAPSVKRNLISV 435

Query: 425 PLLDMDGFHFHF 460
            +L   G+ + F
Sbjct: 436 MVLTNSGYDYDF 447



 Score = 26.2 bits (56), Expect(2) = 3e-09
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
 Frame = +1

Query: 103 NAVALKPKGGTHK-KPDISKDQ-------CVFCRQKGHWKRDCPKF 216
           N  + +   G HK K  +   Q       C FC+ +GH +R+C  F
Sbjct: 308 NTPSTQASNGAHKGKAQVPAGQNSAGKFFCKFCKAEGHAQRNCEGF 353


>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1407

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG +  R ++ GE  +RV NG     E +G F L L +G +L LHD  +VPS+ RN++S+
Sbjct: 336 QGFAMRRTLKRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 425 PLLDMDGFHFHFG 463
             LD DG++  FG
Sbjct: 396 SRLDNDGYYCTFG 408


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = +2

Query: 239 QAQGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNII 418
           + +GL  SR +  GEVD+ VGNGA V A  VGT  L LPSG  L L++CY + ++ +N+I
Sbjct: 200 KTKGLKRSRNLARGEVDIHVGNGASVVAVAVGTMPLSLPSGLVLELNNCYCILALCKNVI 259

Query: 419 SIPLLDMDGFHF 454
           S   L  +G+ F
Sbjct: 260 SASCLQAEGYGF 271


>emb|CAN75475.1| hypothetical protein VITISV_006889 [Vitis vinifera]
          Length = 1028

 Score = 57.4 bits (137), Expect(2) = 7e-09
 Identities = 32/73 (43%), Positives = 40/73 (54%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG   SR    GE  + VGNG + A   +G FRL L SG  L L + + VPS  RN+IS+
Sbjct: 247 QGCLRSRMPTDGERYIYVGNGNKAAVNAIGLFRLQLDSGCTLDLEETFVVPSFKRNLISV 306

Query: 425 PLLDMDGFHFHFG 463
             LD  G+   FG
Sbjct: 307 SCLDKFGYCCSFG 319



 Score = 28.1 bits (61), Expect(2) = 7e-09
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 157 KDQCVFCRQKGHWKRDCPKF 216
           K  C FC++ GH K+ C K+
Sbjct: 208 KITCFFCKKAGHMKKTCTKY 227


>emb|CAN72447.1| hypothetical protein VITISV_027001 [Vitis vinifera]
          Length = 1051

 Score = 55.1 bits (131), Expect(2) = 9e-09
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG   SR    GE  + VGNG +VA + +G F+L + S + L L + + VPS  RN+IS+
Sbjct: 217 QGCLRSRMPTDGERYIYVGNGNKVAVKAIGIFKLQIDSRYTLDLEETFEVPSFRRNLISV 276

Query: 425 PLLDMDGFHFHF 460
             LD  G+ + F
Sbjct: 277 SCLDKFGYCYSF 288



 Score = 30.0 bits (66), Expect(2) = 9e-09
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 106 AVALKPKGGTHKKPDISKDQCVFCRQKGHWKRDCPKF 216
           AV+   K    KK D  +  C FC++ GH K+ C K+
Sbjct: 162 AVSKTSKQKVQKKQD-KEITCFFCKKAGHMKKTCTKY 197


>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
           polyprotein [Oryza sativa Japonica Group]
           gi|31430568|gb|AAP52462.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1225

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +2

Query: 245 QGLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISI 424
           QG +  R +R GE  +RV NG     E +G F L L +G +L LHD  +VPS+ RN++S+
Sbjct: 336 QGFAMRRTLRRGERRIRVANGVETEVEAIGDFTLTLHTGFKLQLHDVLYVPSMKRNLVSV 395

Query: 425 PLLDMDGFHFHFG 463
             LD  G++  FG
Sbjct: 396 SRLDNGGYYCTFG 408


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score = 55.1 bits (131), Expect(2) = 3e-08
 Identities = 28/71 (39%), Positives = 43/71 (60%)
 Frame = +2

Query: 248 GLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISIP 427
           G   +RK +  E  L +GN  +     VGT+RL L +GHR+ L + ++VPSI+RN++S+ 
Sbjct: 281 GFLTTRKPKESEKFLYMGNRLKXEVVAVGTYRLLLETGHRMDLLNTFYVPSISRNLVSLS 340

Query: 428 LLDMDGFHFHF 460
            LD  G+   F
Sbjct: 341 KLDATGYXVLF 351



 Score = 28.5 bits (62), Expect(2) = 3e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 166 CVFCRQKGHWKRDCPK 213
           C FC +KGH K+DC K
Sbjct: 236 CYFCGKKGHVKKDCIK 251


>emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
          Length = 1601

 Score = 54.7 bits (130), Expect(2) = 4e-08
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +2

Query: 248 GLSDSRKVRPGEVDLRVGNGARVAAERVGTFRLDLPSGHRLVLHDCYFVPSITRNIISIP 427
           G    RK    E  + VG+G  V  E +G FRL L SG+ L L D + VPS  RN+IS+ 
Sbjct: 618 GCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDTFIVPSFRRNLISVS 677

Query: 428 LLDMDGFHFHFG 463
           +LD  G+   FG
Sbjct: 678 VLDKSGYCCSFG 689



 Score = 28.1 bits (61), Expect(2) = 4e-08
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 130 GTHKKPDISKDQCVFCRQKGHWKRDCPKF 216
           G  +K    +  C FC + GH K++C K+
Sbjct: 576 GPEQKKXKVEVTCFFCNKPGHTKKECTKY 604


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