BLASTX nr result
ID: Mentha23_contig00023206
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00023206
(613 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 210 2e-52
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus... 207 3e-51
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 165 1e-38
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 165 1e-38
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 162 9e-38
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 160 2e-37
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 149 8e-34
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 147 2e-33
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 146 5e-33
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 144 2e-32
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 143 3e-32
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 143 3e-32
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 141 1e-31
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 140 2e-31
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 140 4e-31
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 140 4e-31
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 136 4e-30
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 134 3e-29
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 131 1e-28
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 210 bits (535), Expect = 2e-52
Identities = 115/190 (60%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I +L +S+ T +
Sbjct: 893 MDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTATPE 952
Query: 431 GGHPESSTLPDASS-KEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENV 255
G ESS ASS KEG ++ F SL+ FI+KK P+S+L LKL +EHS+ED+ +LE +
Sbjct: 953 G---ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHSDEDKGYLEKI 1009
Query: 254 ASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 75
ASNI G+T+ QLMVFL TCISRY+ KK GEPGTQMTLKTFHFAGVA
Sbjct: 1010 ASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGVA 1069
Query: 74 SMNVTLGVPR 45
SMNVTLGVPR
Sbjct: 1070 SMNVTLGVPR 1079
>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
Length = 1109
Score = 207 bits (526), Expect = 3e-51
Identities = 114/190 (60%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I +L +S+ T +
Sbjct: 608 MDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTGTPE 667
Query: 431 GGHPESSTLPDASS-KEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENV 255
G ESS ASS KEG ++ F SL+ FI+KK P+S+L LKL +EH +ED+ +LE +
Sbjct: 668 G---ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKGYLEKI 724
Query: 254 ASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 75
ASNI G+T+ QLMVFL TCISRY KK GEPGTQMTLKTFHFAGVA
Sbjct: 725 ASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGVA 784
Query: 74 SMNVTLGVPR 45
SMNVTLGVPR
Sbjct: 785 SMNVTLGVPR 794
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 165 bits (417), Expect = 1e-38
Identities = 99/193 (51%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP+QMEEK G PLNF RLFMK KATCP +K L+ EI EIV E +
Sbjct: 899 MDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERL------------ 946
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHL 264
+ D + + GC +AF SL DF+ K + NLR L L +E++ +DR +L
Sbjct: 947 -------SYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 263 ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 84
E +A NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFA
Sbjct: 1000 EKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059
Query: 83 GVASMNVTLGVPR 45
GVASMNVTLGVPR
Sbjct: 1060 GVASMNVTLGVPR 1072
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 165 bits (417), Expect = 1e-38
Identities = 99/193 (51%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP+QMEEK G PLNF RLFMK KATCP +K L+ EI EIV E +
Sbjct: 899 MDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERL------------ 946
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHL 264
+ D + + GC +AF SL DF+ K + NLR L L +E++ +DR +L
Sbjct: 947 -------SYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 263 ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 84
E +A NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFA
Sbjct: 1000 EKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059
Query: 83 GVASMNVTLGVPR 45
GVASMNVTLGVPR
Sbjct: 1060 GVASMNVTLGVPR 1072
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 162 bits (409), Expect = 9e-38
Identities = 97/193 (50%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP++MEEK G PLNF RLFMK KATCP +K L+ EI EIV E +
Sbjct: 899 MDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERL------------ 946
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHL 264
+ D + + GC +AF SL DF+ K + NLR L L +E++ +DR +L
Sbjct: 947 -------SYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 263 ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 84
E + NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFA
Sbjct: 1000 EKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059
Query: 83 GVASMNVTLGVPR 45
GVASMNVTLGVPR
Sbjct: 1060 GVASMNVTLGVPR 1072
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 160 bits (406), Expect = 2e-37
Identities = 93/190 (48%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
+DPAQMEEKTG PLNFERLFMKAKATCP+ Q L ++I I+ IE
Sbjct: 895 LDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIE----------- 943
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKC-PSSNLRLKLTKEEHSEEDRYHLENV 255
E+ + D S E C + F SL F+ K+ P+ L KL E S +D+ ++++V
Sbjct: 944 ----ENHSRSDISEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQSV 999
Query: 254 ASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 75
S+ SGIT+ QL VFL C +RY KK GEPGTQMTLKTFHFAGVA
Sbjct: 1000 VSSTSGITQQQLEVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1059
Query: 74 SMNVTLGVPR 45
SMNVTLGVPR
Sbjct: 1060 SMNVTLGVPR 1069
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 149 bits (375), Expect = 8e-34
Identities = 95/201 (47%), Positives = 112/201 (55%), Gaps = 12/201 (5%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPAQME K+G PLNFERLF+KAKATCP+ K L+ E +ET+E +L K
Sbjct: 904 MDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEF----SETVEDRLSKD----- 954
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEE---------HS 285
DAS + GC AF GSLK F+ K + + L E S
Sbjct: 955 ----------DASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSS 1004
Query: 284 EEDRYHLEN-VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 108
+ D + N V NI+G+T QL VFL TC+SRY +KK GEPGTQM
Sbjct: 1005 DNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQM 1064
Query: 107 TLKTFHFAGVASMNVTLGVPR 45
TLKTFHFAGVASMNVTLGVPR
Sbjct: 1065 TLKTFHFAGVASMNVTLGVPR 1085
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 147 bits (372), Expect = 2e-33
Identities = 89/191 (46%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME + G PLN ++LFMK ATCP Q L+ EI +I+ + +
Sbjct: 909 MDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEH--------- 959
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEEHSEEDRYHLEN 258
DASS +GC + F LKDF+E K S R E H +D E+
Sbjct: 960 ----------DASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIEES 1009
Query: 257 VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGV 78
+A+NISGI+ QL VFL TC+SRY SKK GEPGTQMTLKTFHFAGV
Sbjct: 1010 IAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGV 1069
Query: 77 ASMNVTLGVPR 45
ASMNVTLGVPR
Sbjct: 1070 ASMNVTLGVPR 1080
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 146 bits (368), Expect = 5e-33
Identities = 89/192 (46%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA ME K+G PL+F RLF +AKATCPA + + L+ DE+ EIV S+L + +T D
Sbjct: 906 MDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIV----RSRLSEQDMTPD 961
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHLE 261
G GC F S++ F++ K + L + E L+
Sbjct: 962 G---------------GCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQ 1006
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
N+ NISG+T QL VFL TCISRY SKK GEPGTQMTLKTFHFAG
Sbjct: 1007 NIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAG 1066
Query: 80 VASMNVTLGVPR 45
VASMNVTLGVPR
Sbjct: 1067 VASMNVTLGVPR 1078
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 144 bits (364), Expect = 2e-32
Identities = 87/192 (45%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K+G+PLN +RLFMK KATCPA L+ EI IV + +
Sbjct: 898 MDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKH--------- 948
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPS---SNLRLKLTKEEHSEEDRYHLE 261
D + + GC AF L +FI+K+ + + L L ++ +E LE
Sbjct: 949 ----------DMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLE 998
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
+VA+NISGI++ QL VFL TCISRY K+ GEPGTQMTLKTFHFAG
Sbjct: 999 HVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1058
Query: 80 VASMNVTLGVPR 45
VASMN+TLGVPR
Sbjct: 1059 VASMNITLGVPR 1070
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 143 bits (361), Expect = 3e-32
Identities = 89/192 (46%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA ME K G PLNFERLF+KAKATCPA + L+ +++ E+V ES+L K +T +
Sbjct: 690 MDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELV----ESRLSKKDMTPE 745
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSSNLR---LKLTKEEHSEEDRYHLE 261
G GC AF SLK F++ + + T+ E+ +
Sbjct: 746 G---------------GCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTK 790
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
N+ +SG T QL VFL TCISRY SKK GEPGTQMTLKTFHFAG
Sbjct: 791 NIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 850
Query: 80 VASMNVTLGVPR 45
VASMNVTLGVPR
Sbjct: 851 VASMNVTLGVPR 862
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 143 bits (361), Expect = 3e-32
Identities = 91/192 (47%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K G PLNF RLF+K KATCPA + L+ +I+E V E
Sbjct: 904 MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN--------- 954
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK---KCPSSNLRLKLTKEEHSEEDRYHLE 261
+S EGC AF +L F+E+ K ++ L L E EE+ E
Sbjct: 955 ------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQE 1002
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
A NISGIT QL VFL TCISRYQ K+ GEPGTQMTLKTFHFAG
Sbjct: 1003 KFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAG 1062
Query: 80 VASMNVTLGVPR 45
VASMNVTLGVPR
Sbjct: 1063 VASMNVTLGVPR 1074
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 141 bits (356), Expect = 1e-31
Identities = 90/195 (46%), Positives = 112/195 (57%), Gaps = 6/195 (3%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K G+PLN ++LFMK ATCP L+ + IK++ +E KL + + D
Sbjct: 905 MDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQM----LEDKLLQHDTSSD 960
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK-----KCPSSNLRLKLTKEEHSEE-DRY 270
GG C + F +L +F++K KC L L E+H E+ D
Sbjct: 961 GG---------------CSEEFKKNLTEFLDKRIELMKCTRRALHLH---EDHVEKKDSC 1002
Query: 269 HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 90
E+VA+ ISGI+ QL VFL TC+SRYQSKK GEPGTQMTLKTFH
Sbjct: 1003 VEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFH 1062
Query: 89 FAGVASMNVTLGVPR 45
FAGVASMNVTLGVPR
Sbjct: 1063 FAGVASMNVTLGVPR 1077
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 140 bits (354), Expect = 2e-31
Identities = 80/189 (42%), Positives = 104/189 (55%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA ME K+G PLNF+RL MK KATCP Q++L+ ++ EIV + +
Sbjct: 917 MDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLA----------- 965
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENVA 252
A KE C +AF SL+ F E + + ++K ++ ++ LE V
Sbjct: 966 -----------AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVT 1014
Query: 251 SNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAS 72
SGIT+ QL VF++TC SRY K+ GEPGTQMTLKTFHFAGVAS
Sbjct: 1015 HKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1074
Query: 71 MNVTLGVPR 45
MN+T GVPR
Sbjct: 1075 MNITQGVPR 1083
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 140 bits (354), Expect = 2e-31
Identities = 80/189 (42%), Positives = 104/189 (55%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA ME K+G PLNF+RL MK KATCP Q++L+ ++ EIV + +
Sbjct: 910 MDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLA----------- 958
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENVA 252
A KE C +AF SL+ F E + + ++K ++ ++ LE V
Sbjct: 959 -----------AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVT 1007
Query: 251 SNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAS 72
SGIT+ QL VF++TC SRY K+ GEPGTQMTLKTFHFAGVAS
Sbjct: 1008 HKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1067
Query: 71 MNVTLGVPR 45
MN+T GVPR
Sbjct: 1068 MNITQGVPR 1076
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 140 bits (352), Expect = 4e-31
Identities = 88/192 (45%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K G PLN ++LFMK ATCP Q L+ EI +I+ + +
Sbjct: 836 MDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEH--------- 886
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEEH-SEEDRYHLE 261
DASS +GC + F L F+E K S R L E+H E E
Sbjct: 887 ----------DASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEE 936
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
++A+NISGI+ QL VFL TC+SRY KK GEPGTQMTLKTFHFAG
Sbjct: 937 SIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 996
Query: 80 VASMNVTLGVPR 45
VASMNVTLGVPR
Sbjct: 997 VASMNVTLGVPR 1008
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 140 bits (352), Expect = 4e-31
Identities = 88/192 (45%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K G PLN ++LFMK ATCP Q L+ EI +I+ + +
Sbjct: 898 MDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEH--------- 948
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEEH-SEEDRYHLE 261
DASS +GC + F L F+E K S R L E+H E E
Sbjct: 949 ----------DASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEE 998
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
++A+NISGI+ QL VFL TC+SRY KK GEPGTQMTLKTFHFAG
Sbjct: 999 SIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 1058
Query: 80 VASMNVTLGVPR 45
VASMNVTLGVPR
Sbjct: 1059 VASMNVTLGVPR 1070
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 136 bits (343), Expect = 4e-30
Identities = 89/195 (45%), Positives = 107/195 (54%), Gaps = 6/195 (3%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDPA+ME K G PLN ++LFMK ATCP L+ D+IK++ +E KL + + D
Sbjct: 911 MDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQM----LEDKLTQHKTSSD 966
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEK-----KCPSSNLRLKLTKEEH-SEEDRY 270
GG C + F LK F+E+ KC L L E+H + D
Sbjct: 967 GG---------------CSEEFKECLKKFLEERIQLLKCTRKALHLD---EKHVGKNDSC 1008
Query: 269 HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 90
E +A+NISGI+ QL VFL TC SRY SK GEPGTQMTLKTFH
Sbjct: 1009 IEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFH 1068
Query: 89 FAGVASMNVTLGVPR 45
FAGVASMNVTLGVPR
Sbjct: 1069 FAGVASMNVTLGVPR 1083
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 134 bits (336), Expect = 3e-29
Identities = 86/190 (45%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPA-MDQKFLTTDEIKEIVTETIESKLFKSSVTF 435
MDPA ME K G PLNFERLF+K+KA CP D + L++ ++ ++V E + F S
Sbjct: 910 MDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE--FDMSRLA 967
Query: 434 DGGHPESSTLPDASSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENV 255
+ G E D F SL+ FI+ KLT+E ++E +L+
Sbjct: 968 EKGVFEVGFSAD----------FVESLQSFIKDNA-------KLTEEGFTDEHSQNLKKF 1010
Query: 254 ASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVA 75
ISGIT+ QL VFL C+SRY SKK GEPGTQMTLKTFHFAGVA
Sbjct: 1011 GQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVA 1070
Query: 74 SMNVTLGVPR 45
SMNVTLGVPR
Sbjct: 1071 SMNVTLGVPR 1080
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 131 bits (330), Expect = 1e-28
Identities = 86/192 (44%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Frame = -3
Query: 611 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFD 432
MDP ME + G PLN +R+ MKAKATCP L E+ +IV
Sbjct: 920 MDPVSMEGQNGTPLNLDRVLMKAKATCPRGATPALPPSELWKIV---------------- 963
Query: 431 GGHPESSTLPDASSKEGCLQAFAGSLKDFIEKK---CPSSNLRLKLTKEEHSEEDRYHLE 261
ES D S C AF SL+ F+ K+ S+ RL L E+ D E
Sbjct: 964 ----ESKFSQDGSE---CSMAFLDSLRKFLRKEFDTISSTRKRLSLPLEDFGNLDD---E 1013
Query: 260 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 81
NVA+N+SG+T QL VFL TCI RY KK GEPGTQMTLKTFHFAG
Sbjct: 1014 NVAANVSGLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1073
Query: 80 VASMNVTLGVPR 45
VASMN+TLGVPR
Sbjct: 1074 VASMNITLGVPR 1085