BLASTX nr result

ID: Mentha23_contig00022514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00022514
         (370 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    62   1e-07
ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    62   1e-07
ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    61   2e-07

>ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 2
           [Solanum lycopersicum]
          Length = 208

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +1

Query: 196 FPATCVLHVWRYMAKFKQCVCPICGCLIFNLVSHPSALVQPGEDAAKILSEISRYN 363
           F A C+L +W Y +  ++C CPIC CLI  LV   S LVQ  +D  ++L +I RYN
Sbjct: 41  FCANCILQLWYYRSTLRRCKCPICSCLISKLVPEASLLVQQEKDVVELLKKIRRYN 96


>ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 1
           [Solanum lycopersicum]
          Length = 227

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +1

Query: 196 FPATCVLHVWRYMAKFKQCVCPICGCLIFNLVSHPSALVQPGEDAAKILSEISRYN 363
           F A C+L +W Y +  ++C CPIC CLI  LV   S LVQ  +D  ++L +I RYN
Sbjct: 60  FCANCILQLWYYRSTLRRCKCPICSCLISKLVPEASLLVQQEKDVVELLKKIRRYN 115


>ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum
           tuberosum]
          Length = 226

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +1

Query: 196 FPATCVLHVWRYMAKFKQCVCPICGCLIFNLVSHPSALVQPGEDAAKILSEISRYN 363
           F A+C+L +W Y +  ++C CPIC CLI  LV   S L Q  ED  ++L +I RYN
Sbjct: 59  FCASCILQLWYYRSTLRRCKCPICCCLISKLVPEASLLAQQEEDVVELLKKIRRYN 114


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