BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00022150
         (1464 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus...   548   e-153
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   537   e-150
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   526   e-146
gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus...   513   e-143
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   503   e-140
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   498   e-138
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   493   e-137
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     486   e-134
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   484   e-134
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   480   e-133
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   479   e-132
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   479   e-132
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   473   e-130
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   473   e-130
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   467   e-129
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   465   e-128
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   463   e-127
gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlise...   459   e-126
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   459   e-126
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   449   e-123

>gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Mimulus guttatus]
          Length = 515

 Score =  548 bits (1412), Expect = e-153
 Identities = 295/466 (63%), Positives = 355/466 (76%), Gaps = 21/466 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVS+SA+RT LGL  R L R S L+R VV +FK+++ K   L++ RES ALPLE +
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K+N K  RKVKKR ERV AVS DE  P+T+DLDY EAA+KLE ++K+SP  ++S +EVK 
Sbjct: 61   KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKD 120

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQR-KGRRLNLDKRISMRVTKEGGFFVLAQNK 799
             RVKRRQP RK++   +EAEK     + S+R K RRLNL+KRI++R  KE     + Q +
Sbjct: 121  VRVKRRQP-RKRTEYADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRR 179

Query: 798  KHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVK 619
            K  ++DEDEKIDRLVR+Y++S+DLVSLDWKKMKIPPVLPS+EH WLFKLMQP+K IL VK
Sbjct: 180  KTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVK 239

Query: 618  ETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGR-----------------XXKYFQDF 490
            ET++++LGRE TD++LA A+NM+ VQLRKQLE+GR                   KYFQDF
Sbjct: 240  ETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDF 299

Query: 489  ATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 310
            + G RFQDLCQAG KGL+TAID FE +RK RLSTYGLFWIRH+I+RSMTLSSFTKVSFGL
Sbjct: 300  SNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGL 359

Query: 309  ESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQE 130
            ESVRVEI++AK EL F+L+R+PT EEI+ RVGIS ERYHEVMR SKPI SLH RH VTQE
Sbjct: 360  ESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQE 419

Query: 129  EFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            EFIN ITD   VEGD R+QPA            LKPKE+LVIRQRY
Sbjct: 420  EFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRY 465


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  537 bits (1384), Expect = e-150
 Identities = 292/468 (62%), Positives = 350/468 (74%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSSSA+R+PLGL +R   R   LKR V++SFK +++K   L+A +ES++L +ETS
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            KEN K SR+V KR+ERV AV++ E SP+TL+LDY EAA+KLE +YKRS  T  S+ EV+ 
Sbjct: 61   KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 975  HRVKRRQPLRKKSGE-TEEAEKEKAVSLVSQRK--GRRLNLDKRISMRVTKEGGFFVLAQ 805
            H VKRR   RK+  E  EEA+KE A ++V  R+   +RLNLD+RI++   KEG     ++
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             +K + D EDEKID+LVREY+ +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            VKE L++DLGRE TD E+A A NM+  +LRK+LEVGR                   KYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA G RFQDLCQAGVKGL+TAID FE  RKFRLSTYGLFWIRHAI+RSMT SSFTKV F
Sbjct: 300  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLES+RVEIQ+AK EL F+LQRIPT EEII RVG+SPERYHEVM+ SKP+ SLH R++ T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTT 419

Query: 135  QEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEE IN ITD   V+GD R+QPA            LKPKESLVIRQRY
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRY 467


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  526 bits (1354), Expect = e-146
 Identities = 289/468 (61%), Positives = 343/468 (73%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSSSA+R+PLGL +R   R   LKR V++SFK + +K   LV+ +ES++ P+ETS
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            KEN K SR+V KRTERV AV++ E  P+TL+LDY EAA+KLE +YKRS  T   + EVK 
Sbjct: 61   KENEKRSRRVSKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 975  HRVKRRQPLRKKSGET-EEAEKEKAVSLVSQR--KGRRLNLDKRISMRVTKEGGFFVLAQ 805
            H VKRR   RK+  E+ EEA+KE   ++V  R  K +RLNLD+RI++   KEG     ++
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             +K   D EDEKID+LVREY+ +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 180  RRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 239

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            VKE L++DLGRE TD E+A A NM+  +LRK+LE GR                   KYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA   RFQDLCQAGVKGL+TAID FE  RKFRLSTYGLFWIRHAI+R MT SSFTKV F
Sbjct: 300  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 359

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLES+RVEIQ+AK EL F+LQRIPT +EII+RVG SPERYHEVM+ SKPI SLH R++ T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 419

Query: 135  QEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEE IN ITD   V+GD R+QPA            LKPKESLVIRQRY
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRY 467


>gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Mimulus guttatus]
          Length = 516

 Score =  513 bits (1322), Expect = e-143
 Identities = 290/472 (61%), Positives = 348/472 (73%), Gaps = 27/472 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRA--RNLNRASSLKRLVVLSFKSNESKLA-ALVAKRESLALPL 1165
            MGVVTVSSSAARTP+GL A  R     S  K+ +VLS K++++K + AL+A  ES+ALP 
Sbjct: 1    MGVVTVSSSAARTPVGLDAIIRYSTHVSLSKKPLVLSLKTDKAKKSRALIAPLESVALPS 60

Query: 1164 ETSKENRKTSRKVKKRT--ERVKAVSV-DEVSP-TTLDLDYGEAASKLEKLYKRSPGTDV 997
            E   E  K+ RKVKK    +RV AVS+ DE SP +TLDLDY EAA+KLE LYK SP   +
Sbjct: 61   EAKNETVKSLRKVKKTRPDKRVSAVSITDEASPGSTLDLDYTEAAAKLEYLYKTSPA--L 118

Query: 996  SDEEVKTHRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFF 817
            +DEE+KT  V+ RQP RK+  E+ E +      + SQR+G+RL+L+KR+++R+ KE    
Sbjct: 119  TDEEIKTKSVQTRQPRRKRIDESVETKN----LVRSQRRGKRLSLEKRVALRMKKESVPL 174

Query: 816  VLAQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMK 637
            +  + + + + D+DEKIDRL+R+Y+ S+D  SLDWKK KIPPVLPSSEH WLFKLMQPMK
Sbjct: 175  LSQKKEVNNKSDDDEKIDRLLRDYSISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQPMK 234

Query: 636  EILKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX----------------- 508
            EILKVKETL +DLGRE+ DDELA A N +V QLRKQLEVGR                   
Sbjct: 235  EILKVKETLTNDLGREVRDDELAEATNTDVFQLRKQLEVGRTARNKLIKHNLRLVLFVMN 294

Query: 507  KYFQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFT 328
            KYFQDFA GPRFQDLCQAGVKGL+TAID FE +RKFRLSTYGLFWIRHAIVRSMT+SSFT
Sbjct: 295  KYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTISSFT 354

Query: 327  KVSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGR 148
            KVSFGLESVRVEIQ+AK EL F+L R+PT EEIIERVGIS ER++EV R SKPI SLH R
Sbjct: 355  KVSFGLESVRVEIQKAKTELLFELHRLPTDEEIIERVGISAERFNEVTRVSKPISSLHAR 414

Query: 147  HEVTQEEFINAITDV---EGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            H++T EEFIN + D+   EGD R+QPA            LKPKESLV+RQRY
Sbjct: 415  HKITHEEFINGVADIDGFEGDQRQQPALLRLALDDVLDSLKPKESLVVRQRY 466


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  503 bits (1296), Expect = e-140
 Identities = 281/471 (59%), Positives = 342/471 (72%), Gaps = 26/471 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAA--RTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLE 1162
            MGVVTVSSSA+  RTP GL A+  N  + L+R +VL+FK++++K  ALV   E + LP+E
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 1161 TSKENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEV 982
            TSK+++K  R+  K ++RVKAVS DEVSP +++LDY EAA+KLE +YK SP TDVS+ E 
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAE- 119

Query: 981  KTHRVKRRQPLRKKSGETEEAEKEKAVS----LVSQRKGRRLNLDKRISMRVTKEGGFFV 814
               RV RR   R+K     + + EK VS     +  +K +RL+L+KRI++   K+     
Sbjct: 120  DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179

Query: 813  LAQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKE 634
              Q K+  ++ EDE ID LVREY++STDLVSLDWKKMKIPPVLP SEHAWLFKLMQPMK 
Sbjct: 180  SIQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKG 238

Query: 633  ILKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------K 505
            +L+VK+ L+ DLGRE TD ELA A++M  VQ+R+ +EVG+                   K
Sbjct: 239  LLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINK 298

Query: 504  YFQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTK 325
            YFQ+FA GP+FQDLCQAGVKGL+TAID FE +R FRLSTYGLFWIRHAI+RSMTLSSFT+
Sbjct: 299  YFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTR 358

Query: 324  VSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRH 145
            VSFGLESVRVEIQRAK EL FKLQR+PT EEIIE+VGISPERYHEVMRASK + SLH RH
Sbjct: 359  VSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARH 418

Query: 144  EVTQEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
              TQEE+IN ITDVE   GD  RQ A            LKPKESLV+RQRY
Sbjct: 419  ATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRY 469


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  498 bits (1283), Expect = e-138
 Identities = 271/470 (57%), Positives = 340/470 (72%), Gaps = 25/470 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSSSA+RTPLGL  +   + S+L++ ++++FK++E+   ALVA +E + LP+ET 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDV-SDEEVK 979
            K+++K   K +K  + VK+ + D  SP TL++DY EAA+KLE LYKRSP T+  SD E  
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 978  THRVKRRQPLRKKSGETEEAEKEKAVSLVSQR----KGRRLNLDKRISMRVTKEGGFFVL 811
               ++R +  RKK+ E++  + E   S    R    K +RL+L+KR++++  K+      
Sbjct: 121  DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180

Query: 810  AQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEI 631
               K+  R +E+EKI+ LVREY++STDLVSLDWKKMKIPPVL SSEHAWLFKLMQPMK +
Sbjct: 181  IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 630  LKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KY 502
            L+VKE L+ DLGRE T+ ELA A NM VVQ++K LEVGR                   KY
Sbjct: 241  LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 300

Query: 501  FQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 322
            FQDFA GP+FQDLCQAGVKGL+TAID FE +R FRLSTYGLFWIRHAI+RSMTLSSFT+V
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRV 360

Query: 321  SFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHE 142
            SFGLESVR EIQ+AK  + F L+R+PT +EIIE+VGISPERYHEVMRASKP+ SLH RH 
Sbjct: 361  SFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHT 420

Query: 141  VTQEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
             TQEEFIN ITD   VEGD+R++PA            LKPKESLVIRQRY
Sbjct: 421  TTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRY 470


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  493 bits (1269), Expect = e-137
 Identities = 271/468 (57%), Positives = 332/468 (70%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVV+VSSSAARTPLGL  +   +  + +R + ++FK+++S   ALV  +E + LP+ET+
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            KE+ K   K KK  + V  V  D+ SP TL++DY EAA+KLE +YK SP T  SD E   
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 975  HRVKRRQPLRKKSGETEEA---EKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQ 805
             ++K R+  RK+S E++E      ++ V      + +RL+LD RI+++  +E    V  +
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             KK   ++E EKIDRLVR+Y++STDLVSLDW+KMKIPPVLPS EH WLFKLMQPMK +L+
Sbjct: 181  RKKSS-ENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
             KE L+ DLGR+ T+DELA A NM   Q+RK LEVG+                   KYFQ
Sbjct: 240  AKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQ 299

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA GPRFQDLCQAGVKGL+TAID FE RR+FRLSTY LFWIRHAI+RSMTLSSFT+VSF
Sbjct: 300  DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF 359

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLESVRVEIQRAK EL F+L R PT EEII++VGISPERY EVMRASKP+ SLH RH VT
Sbjct: 360  GLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVT 419

Query: 135  QEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEEFIN ITD++   GD RRQPA            LKPKESLVIRQRY
Sbjct: 420  QEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRY 467


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  486 bits (1250), Expect = e-134
 Identities = 265/471 (56%), Positives = 341/471 (72%), Gaps = 26/471 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRAR-NLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLET 1159
            MGVVTVSSSA+RTPLGL  + + NR+S LK+ ++++FK ++S    LVA ++ + LP+ET
Sbjct: 1    MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 1158 SKENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVK 979
             KE +    K KK + RVKAV+ DE S +T+++DY EAA+KLE ++K S   DV D    
Sbjct: 61   RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLS-SADVEDAVGL 119

Query: 978  THRVKRRQPLRKKSGETEEAEKEKAVSLVS-----QRKGRRLNLDKRISMRVTKEGGFFV 814
            T R +RR+   K  GE++E   +K+ +  +     ++K +RL+L KR+ ++  KE    V
Sbjct: 120  TSRGRRRRS--KVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAV 177

Query: 813  LAQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKE 634
            +   K+    +E+EKI++LVREY++STDLVSLDWKKMKIPPVLPSSEH WLFKLMQP+K+
Sbjct: 178  VLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQ 237

Query: 633  ILKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------K 505
            + +V E L+  LGRE T++ELA A N+ VVQ+++ LE GR                   K
Sbjct: 238  LFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNK 297

Query: 504  YFQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTK 325
            YFQDF  GP+FQDLCQAGV+GL+TAID FE +R+FRLSTYGLFWIRHAI+RSMT+SSFT+
Sbjct: 298  YFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTR 357

Query: 324  VSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRH 145
            VSFGLESVR EIQ+AK EL F+L+R+PT EEIIE+VGISPERYHEVMRASKP+ SL+ RH
Sbjct: 358  VSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRH 417

Query: 144  EVTQEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
              TQEEFINAITD   V+GD RR+PA            LKPKESLVIRQRY
Sbjct: 418  VTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRY 468


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  484 bits (1247), Expect = e-134
 Identities = 276/468 (58%), Positives = 325/468 (69%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSSSA+R+PLGL +R   R   LKR V++SFK + +K   LV+ +ES++ P+ETS
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            KEN K SR+V KRTERV AV++ E  P+TL+LDY EAA+KLE +YKRS  T   + EVK 
Sbjct: 61   KENEKRSRRVSKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 975  HRVKRRQPLRKKSGET-EEAEKEKAVSLVSQR--KGRRLNLDKRISMRVTKEGGFFVLAQ 805
            H VKRR   RK+  E+ EEA+KE   ++V  R  K +RLNLD+RI++   KEG       
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG------- 172

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
                                  +TDL SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 173  ----------------------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            VKE L++DLGRE TD E+A A NM+  +LRK+LE GR                   KYFQ
Sbjct: 211  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 270

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA   RFQDLCQAGVKGL+TAID FE  RKFRLSTYGLFWIRHAI+R MT SSFTKV F
Sbjct: 271  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 330

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLES+RVEIQ+AK EL F+LQRIPT +EII+RVG SPERYHEVM+ SKPI SLH R++ T
Sbjct: 331  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 390

Query: 135  QEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEE IN ITD   V+GD R+QPA            LKPKESLVIRQRY
Sbjct: 391  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRY 438


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  480 bits (1236), Expect = e-133
 Identities = 264/471 (56%), Positives = 338/471 (71%), Gaps = 26/471 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLN-RASSLKRLVVLSFKSNESKLAALVAKRESLALPLET 1159
            MGVVTVSSS +RTPLGL    ++ + S+L++ ++++F++++S   ALVA +E + LP+ET
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 1158 SKENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSD-EEV 982
             K+ +K   K +K  + VKA  ++E     L+LDY EAA+KLE LYKRSP T+ SD E V
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 981  KTHRVKRRQPLRKKSGETEE-AEKEKAVSLVSQ---RKGRRLNLDKRISMRVTKEGGFFV 814
                +KR +  RKK  E ++  EK  +  +V +   +K +RL+LDKR++++  K+     
Sbjct: 121  DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 813  LAQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKE 634
                K+  +  E+E ++ LVREY++STDLVSLDWKKM+IPPVL SSEH WLFKLMQPMK 
Sbjct: 181  SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240

Query: 633  ILKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------K 505
            +L+VKE L+ DLGRE    ELA A NM VVQ+++ LEVGR                   K
Sbjct: 241  LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK 300

Query: 504  YFQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTK 325
            YFQDFA GP+FQDLCQAGVKGL+TAID FE +R+FRLSTYGLFWIRHAI+RSMTLSSFT+
Sbjct: 301  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR 360

Query: 324  VSFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRH 145
            VSFGLESVR EIQ+AK E+  +L+R+PT +EIIE+VGISPERYHEVMRASKP+ SL+ RH
Sbjct: 361  VSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRH 420

Query: 144  EVTQEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
             VTQEEFIN ITD   V+GD+RR+PA            LKPKESLVIRQRY
Sbjct: 421  SVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRY 471


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  479 bits (1234), Expect = e-132
 Identities = 266/468 (56%), Positives = 330/468 (70%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVT+SSS AR+P+GL    ++  S+ KR ++++FK+++S   AL + +E + LP+ET 
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K ++K     +KR ERVK V  DE SP TLD+DY EAA+KLE +YK SP    S+ +   
Sbjct: 59   KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118

Query: 975  HRVKRRQPLRKKSGETEEAEKE---KAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQ 805
              VKR +  RK+ GE E+   +   K V     ++ +RL+LDKRI +R  ++    V+ +
Sbjct: 119  GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEK--VVTK 176

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             +K    DE EKI++LVREY+ STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK  ++
Sbjct: 177  TRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            VKE L+ DLGRE TD ELA A NM   Q++K LEVGR                   KYFQ
Sbjct: 237  VKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQ 296

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA GPRFQDLCQAGVKGL+TAID FE +R+FRLSTYGLFWIRHAI+RSMT+SSFT+V F
Sbjct: 297  DFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPF 356

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLESVR EIQRAK EL F+L+R+PT EEII+ V ISPERY EVM+ASKPI SLH RH VT
Sbjct: 357  GLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVT 416

Query: 135  QEEFINAITDVEG---DSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEEFIN ITDV+G   +++RQPA            LKPKESLVIRQR+
Sbjct: 417  QEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRF 464


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  479 bits (1233), Expect = e-132
 Identities = 272/466 (58%), Positives = 332/466 (71%), Gaps = 21/466 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVV+VSSSA+RTPLGL  +     S+ KR ++++FK+N+S   +LVA  E + LP+ET+
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K  +K   K KK + R+KAV   EVSP TL +DY EAA+KLE +YK SPGTD SD E  +
Sbjct: 61   K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 975  HRVKR-RQPLRKKSGETEEAEKEKAVSLVSQR--KGRRLNLDKRISMRVTKEGGFFVLAQ 805
              ++R RQ  RK S   +E E      +V  R  K +RL+L+KRIS+R+  E      A 
Sbjct: 119  GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             +K R++ E+EKID LVREY++STDLVSLDWKKMKIPPVL SSEH WLFKLMQPMK +L+
Sbjct: 179  KRKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            VKE L+ +LG E TD ELA A NM+V+Q+RKQ+ VGR                   KYFQ
Sbjct: 238  VKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA G +FQD CQAGVKGL+TAID FE +R+FRLSTYGLFWIRHAI+RSMTLSSFT+VSF
Sbjct: 298  DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSF 357

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLES+R EIQ+AK EL F+L+R P  +EIIE+V ISPERYHEV RASKP+ SLH RH+ T
Sbjct: 358  GLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTT 417

Query: 135  QEEFINAITDVE-GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEEFI  I DV+ GD RRQ A            LKPKESLV+RQRY
Sbjct: 418  QEEFIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRY 463


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  473 bits (1216), Expect = e-130
 Identities = 262/469 (55%), Positives = 328/469 (69%), Gaps = 24/469 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSS+AARTP  L  +  N +S+LKR  +++FK+++     LV+  E + LP+E++
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
               +K S    K  +RVKAV +DE +P +LDLDY EAA+KLE ++K SP T+ SD+E K 
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQNKK 796
             R KR Q   KKS           +     ++ +RL+LDKRI+++  KEG    L + +K
Sbjct: 121  GRSKRGQKRSKKSAN----RPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQK 176

Query: 795  HRRDDEDE----KIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEIL 628
              +++ DE    +IDRLVR+Y++STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK ++
Sbjct: 177  DTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALV 236

Query: 627  KVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYF 499
            +V+E L+  LGRE T+ ELA A NM V+Q+R+QLEVGR                   KYF
Sbjct: 237  EVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYF 296

Query: 498  QDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVS 319
            +DFA+GP+FQDLCQAGVKGL+TAID FE +RKFRLSTY LFWIRHAI+RSMTLSSFT+VS
Sbjct: 297  EDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVS 356

Query: 318  FGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEV 139
            FGL+SVRVEIQRAK EL  +L R+PT  EI  +VGIS ERY EVMRA+KP+ SLH RH  
Sbjct: 357  FGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHST 416

Query: 138  TQEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            T EE IN ITDVE   GD+RRQPA            LKPKESLVIRQRY
Sbjct: 417  TSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRY 465


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  473 bits (1216), Expect = e-130
 Identities = 270/465 (58%), Positives = 326/465 (70%), Gaps = 20/465 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVT SSSAARTPLGL  +     S++KR +V++FK +++    LV  RE   LP+ETS
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K      +K + +T R       EVS  TL++DY EAA+KLE +YK SP TD SD ++  
Sbjct: 61   K-----GKKRRGKTNR-------EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQR--KGRRLNLDKRISMRVTKEGGFFVLAQN 802
               K RQ  RK     E+AE   + ++V  R  K +RL+LDKRI+++  +E       + 
Sbjct: 109  LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRK 168

Query: 801  KKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKV 622
            KK  +DD +EKI+ LVR Y++ST+LVSLDW+KMKIPPVLPS+EHAWLFKLMQPMK +L V
Sbjct: 169  KKDSKDD-NEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227

Query: 621  KETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQD 493
            K  L+ +LGR+ TD ELA A NM V ++RKQLEVGR                   KYFQD
Sbjct: 228  KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287

Query: 492  FATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 313
            FA GPRFQDLCQAGVKGL+TAID FE +R+F+LSTY LFWIRHAI+RSMTLSSFTKVSFG
Sbjct: 288  FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347

Query: 312  LESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQ 133
            LESVR EIQ+AK EL  +LQR PT EEIIERVGIS ERYHEV+RA+KP  SLH RH VTQ
Sbjct: 348  LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407

Query: 132  EEFINAITDVE-GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            EEFIN ITD++ GD+RRQPA            LKPKESLVIRQRY
Sbjct: 408  EEFINGITDIDGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRY 452


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  467 bits (1202), Expect = e-129
 Identities = 260/470 (55%), Positives = 327/470 (69%), Gaps = 25/470 (5%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSS+AARTP  L  +  N +S+LKR  +++FK+++     LV+  E + LP+E++
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
               +K S    K  +RVKAV +DE +P +LDLDY EAA+KLE ++K SP T+ SD+E K 
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEG-----GFFVL 811
             R KR Q   KKS           +     ++ +RL+LDKRI+++  ++      G  V 
Sbjct: 121  GRSKRGQKRSKKSAN----RPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKAVP 176

Query: 810  AQNKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEI 631
            +  K+    +ED++IDRLVR+Y++STDLVSLDWKKMKIPPVLPSSEH  LFKL+QPMK +
Sbjct: 177  SLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKAL 236

Query: 630  LKVKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KY 502
            ++V+E L+  LGRE T+ ELA A NM V+Q+R+QLEVGR                   KY
Sbjct: 237  VEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKY 296

Query: 501  FQDFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 322
            F+DFA+GP+FQDLCQAGVKGL+TAID FE +RKFRLSTY LFWIRHAI+RSMTLSSFT+V
Sbjct: 297  FEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRV 356

Query: 321  SFGLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHE 142
            SFGL+SVRVEIQRAK EL  +L R+PT  EI  +VGIS ERY EVMRA+KP+ SLH RH 
Sbjct: 357  SFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRHS 416

Query: 141  VTQEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
             T EE IN ITDVE   GD+RRQPA            LKPKESLVIRQRY
Sbjct: 417  TTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRY 466


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
            gi|561034810|gb|ESW33340.1| hypothetical protein
            PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  465 bits (1196), Expect = e-128
 Identities = 255/468 (54%), Positives = 334/468 (71%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVS+SAARTPL L  + ++   + KRL++++FK N+     LV+ +E + LPLET+
Sbjct: 1    MGVVTVSTSAARTPLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETA 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGT---DVSDEE 985
            K++RK   K     +RV+AVS DE +P TLD+DY EAA+KLE +YK S  +   D  D +
Sbjct: 61   KKHRKRIGKTNDSVKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDID 120

Query: 984  VKTHRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQ 805
             KT RV RR   RK  G+  +   + +V     +K +RL+LDKRI+++   +    V AQ
Sbjct: 121  SKTKRVLRR---RKNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQ 177

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             K  R  +  E ID L+REY++STDLVS+DWKK+KIPPVLPSSEHAWLFKLM+PMKE+L+
Sbjct: 178  KK--RDVNRIENIDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQ 235

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
            V+E L+ ++G+E++D ELA A ++ V+Q+RK LEVG+                   KYFQ
Sbjct: 236  VREDLQ-EVGKEISDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQ 294

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA+GPRFQDLCQAGVKGL+TAID FE +R+ +LSTY LFWIRH+IVRS+TLSS T+V F
Sbjct: 295  DFASGPRFQDLCQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPF 354

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GL+ VR +I RAK EL+F+LQR PT +E++ER+GISPERY++V++ASKPI SLH RH VT
Sbjct: 355  GLDRVRADIHRAKLELRFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVT 414

Query: 135  QEEFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEEFIN ITD   V+GD+RRQ A            LKPKESLV+RQRY
Sbjct: 415  QEEFINGITDLDGVDGDNRRQLAVLRLALDDVLDSLKPKESLVMRQRY 462


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  463 bits (1191), Expect = e-127
 Identities = 258/468 (55%), Positives = 327/468 (69%), Gaps = 23/468 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGV+TVS+SAARTPL L  R ++     KR ++L+FK N+S    LV+ +E + LPLET+
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTD---VSDEE 985
            K+++K   K  +  +RV+AVS  E SP TLD+DY EAA+KLE +YK SP +D   V D +
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 984  VKTHRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQ 805
             K  RV RR   RKK  E  +      V     +K +RL+LDKRI+++   +       Q
Sbjct: 121  SKIERVLRR---RKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQ 177

Query: 804  NKKHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILK 625
             K++ ++   + ID L+R+Y++STDLVS+DWKKMKIPPVLPSSEHAWLFKLMQPMK +L+
Sbjct: 178  KKRNVKN-RVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 624  VKETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQ 496
             KE LK ++ +E+T  ELA A NM ++Q+RK +EVGR                   KYFQ
Sbjct: 237  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295

Query: 495  DFATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 316
            DFA+GPRFQDLCQAGVKGL+TAID FE +R+ +LSTY LFWIRH+IVRS+TLSSFT+V F
Sbjct: 296  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 315  GLESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVT 136
            GLE VRV+IQR K +L F+LQR PT EE++ER+GIS ERYHEVM+ASKPI SLH RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415

Query: 135  QEEFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            QEE+IN ITDV+   GD+RRQ A            LKPKESLVIRQRY
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRY 463


>gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlisea aurea]
          Length = 488

 Score =  459 bits (1180), Expect = e-126
 Identities = 262/439 (59%), Positives = 309/439 (70%), Gaps = 23/439 (5%)
 Frame = -1

Query: 1248 RLVVLSFKSNESKLAALVAKRESLALPLETSK-ENRKTSRKVKKRTERVKAVSVDEVSP- 1075
            R V+LSFK+ +S+  AL+A   S ALPL+  K ++ K SRK+KKR E VKAV  DE S  
Sbjct: 1    RPVILSFKTTKSQKTALIAAPGSEALPLDDVKIQDVKKSRKLKKRPECVKAVPTDEASSS 60

Query: 1074 TTLDLDYGEAASKLEKLYKRSPGTDVSDEE-VKTHRVKRRQPLRKKSGETEEAEKEKAVS 898
            TTLDLDY EAA+KLEK+YKRSP + VSDEE V     KR++P RK+  E   A      S
Sbjct: 61   TTLDLDYNEAAAKLEKIYKRSPASVVSDEEEVDNGTAKRKRPQRKRKSEHANAGVNIVRS 120

Query: 897  LVSQRKGRRLNLDKRISMRVTKEGGFFVLAQNKKHRRDDEDEKIDRLVREYTSSTDLVSL 718
              ++ K +RLNL++RIS+R+  E         K   + D+D+KI RL+REY++S DL SL
Sbjct: 121  TRNKTK-KRLNLNERISLRMKVESDSSATIHRKNVPKSDDDQKISRLLREYSASADLSSL 179

Query: 717  DWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVKETLKSDLGRELTDDELAVAVNMEVVQL 538
            DWKKMKIPPVLPSSEH WLFKLMQPMKE  KVKETLK  LGRE TD ELA A+NM+ V L
Sbjct: 180  DWKKMKIPPVLPSSEHTWLFKLMQPMKETNKVKETLKVALGREPTDYELAEAMNMDPVPL 239

Query: 537  RKQLEVGRXX-----------------KYFQDFATGPRFQDLCQAGVKGLMTAIDHFEQR 409
            RK++EVGR                   KYFQDF+ GP+FQDLCQAGVKGL+TAID FE +
Sbjct: 240  RKRIEVGRASRNKLIRHNLRLVLFVMNKYFQDFSNGPKFQDLCQAGVKGLITAIDRFEPK 299

Query: 408  RKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQRAKQELQFKLQRIPTVEEI 229
            RK RLSTYGLFWIRHA+VRSMTLSSFTKVSFGLES+R EIQ+ K EL  KLQR PT EEI
Sbjct: 300  RKSRLSTYGLFWIRHAVVRSMTLSSFTKVSFGLESIRAEIQKTKMELMVKLQRRPTDEEI 359

Query: 228  IERVGISPERYHEVMRASKPIGSLHGRHEVTQEEFINAIT---DVEGDSRRQPAXXXXXX 58
            + RVGIS ERY EVMR +KP+ SL+ RHE+T EEFI  I+   DVEGD R++ A      
Sbjct: 360  MNRVGISEERYREVMRVTKPVSSLNARHELTNEEFIAGISDADDVEGDRRKELALLRLAI 419

Query: 57   XXXXXXLKPKESLVIRQRY 1
                  LKPKE LVIRQRY
Sbjct: 420  DDVLDSLKPKEGLVIRQRY 438


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  459 bits (1180), Expect = e-126
 Identities = 255/466 (54%), Positives = 328/466 (70%), Gaps = 21/466 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVS+ AARTPL L  R  +     KR ++++FK N+   AALV+ +E + LP+ET+
Sbjct: 1    MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K+++K   K  +  +RV+AVS+ E SP TLD+DY EAA+KLE +YK SP +D  + E   
Sbjct: 61   KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQRKGRRLNLDKRISMRVTKEGGFFVLAQNKK 796
             +V+R    R+K G   + E    V     +K +RL+LDKRI+++   +    V+ Q +K
Sbjct: 121  SKVERVLWRRRKVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLKNNAKEE--VIDQTQK 178

Query: 795  HRR-DDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVK 619
             R   +  + ID L+R+Y++STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMK +L+ K
Sbjct: 179  IRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAK 238

Query: 618  ETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXX-----------------KYFQDF 490
            E L+S +G+E+TD ELA A NM ++Q+RK +EVGR                   KYFQDF
Sbjct: 239  EDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDF 297

Query: 489  ATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 310
            A+G RFQDLCQAGVKGL+TAID FE +R+ +LSTY LFWIRH+IVRS+TLSSFT+V FGL
Sbjct: 298  ASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGL 357

Query: 309  ESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQE 130
            E VRV+IQR K +L F+LQR PT EE++ER+GISPERY+EVM+ASKPI SLH RH  TQE
Sbjct: 358  ERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQE 417

Query: 129  EFINAITDVE---GDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            E+IN ITDV+   GD+RRQ A            LKPKESLVIRQRY
Sbjct: 418  EYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRY 463


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
            gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
            rpoD [Medicago truncatula]
          Length = 514

 Score =  449 bits (1155), Expect = e-123
 Identities = 245/466 (52%), Positives = 317/466 (68%), Gaps = 21/466 (4%)
 Frame = -1

Query: 1335 MGVVTVSSSAARTPLGLRARNLNRASSLKRLVVLSFKSNESKLAALVAKRESLALPLETS 1156
            MGVVTVSSSAARTPLGL A+       LKR + ++FK ++    ALVA +E +   ++ +
Sbjct: 1    MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 1155 KENRKTSRKVKKRTERVKAVSVDEVSPTTLDLDYGEAASKLEKLYKRSPGTDVSDEEVKT 976
            K ++K   K  K  ++ +AV  +E  P++LD+DY EAA+ LE +YK SP TD+ D +   
Sbjct: 61   KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120

Query: 975  HRVKRRQPLRKKSGETEEAEKEKAVSLVSQR-KGRRLNLDKRISMRVTKEGGFFVLAQNK 799
             ++KR     KK G+  + +      + +Q+ K +R+NLD+RI+++ T E    V+   K
Sbjct: 121  RKIKRVSRRGKKIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALK-TSENSEDVIPTRK 179

Query: 798  KHRRDDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKEILKVK 619
            K       EKID L+REY+   DLVSLDWKKMKIPPVLPSSEHA+LFKLMQPMK +L+VK
Sbjct: 180  KRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQVK 239

Query: 618  ETLKSDLGRELTDDELAVAVNMEVVQLRKQLEVGRXXK-----------------YFQDF 490
            + L+ +L RE T+DE+A A NM   Q++K +EVGR  +                 YF DF
Sbjct: 240  DDLQKELEREPTEDEIADATNMHTTQVKKAIEVGRAARNKLIKHNLRLVLFVINRYFSDF 299

Query: 489  ATGPRFQDLCQAGVKGLMTAIDHFEQRRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGL 310
            A  PRFQDLCQAGVKGL+T+ID FE  R+FRLSTY LFWIRHAI+RSMTL+SF++V FGL
Sbjct: 300  ANSPRFQDLCQAGVKGLITSIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLASFSRVPFGL 359

Query: 309  ESVRVEIQRAKQELQFKLQRIPTVEEIIERVGISPERYHEVMRASKPIGSLHGRHEVTQE 130
            ESVR EI+RAK EL F+LQR PT EEIIE+V +SPERY +VM+ASKP+ SLH RH  TQE
Sbjct: 360  ESVRAEIRRAKIELSFQLQRSPTEEEIIEKVHVSPERYRDVMKASKPLLSLHSRHLTTQE 419

Query: 129  EFINAITD---VEGDSRRQPAXXXXXXXXXXXXLKPKESLVIRQRY 1
            EFIN + D   V+GD+RRQPA            LKPKE+LVIRQR+
Sbjct: 420  EFINGVVDDGGVDGDNRRQPALLRLALDDVLDSLKPKENLVIRQRF 465