BLASTX nr result

ID: Mentha23_contig00020984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00020984
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19683.1| hypothetical protein MIMGU_mgv1a001342mg [Mimulus...    87   3e-15
gb|EXB43113.1| hypothetical protein L484_002581 [Morus notabilis]      68   1e-09
ref|XP_006441214.1| hypothetical protein CICLE_v10018879mg [Citr...    61   1e-07
ref|XP_006441212.1| hypothetical protein CICLE_v10018879mg [Citr...    61   1e-07
ref|XP_006493180.1| PREDICTED: RNA polymerase II degradation fac...    60   2e-07
ref|XP_006493177.1| PREDICTED: RNA polymerase II degradation fac...    60   2e-07
ref|XP_007220603.1| hypothetical protein PRUPE_ppa001350mg [Prun...    60   2e-07
gb|EYU45306.1| hypothetical protein MIMGU_mgv1a001376mg [Mimulus...    60   4e-07
ref|XP_006493181.1| PREDICTED: RNA polymerase II degradation fac...    59   7e-07

>gb|EYU19683.1| hypothetical protein MIMGU_mgv1a001342mg [Mimulus guttatus]
           gi|604299841|gb|EYU19684.1| hypothetical protein
           MIMGU_mgv1a001342mg [Mimulus guttatus]
          Length = 837

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLDVN-LVPSANGDGKVFDSIEKSYDNTQSPD 179
           R + + +YEASGN Q  H N  ++N++R LD + +VPSANG+ +V DSI+K+YD  Q P+
Sbjct: 456 RIDPHYDYEASGNQQT-HANYAETNVNRELDADSVVPSANGEEQVLDSIDKTYDTIQYPE 514

Query: 180 RLHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDD 287
            LHQ+SS F+++L+L  L  GN TK  EKQV P ++
Sbjct: 515 NLHQISSQFREALSLGPLERGNVTK--EKQVNPANE 548


>gb|EXB43113.1| hypothetical protein L484_002581 [Morus notabilis]
          Length = 840

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLDVNLVPSANGDGKVFDSIEKSY-DNTQSPD 179
           R+E N  YE S NGQ L    LD +I RG + + V S++G+ +V +SI++ Y   +Q+ +
Sbjct: 462 RSEENYSYEMSVNGQALPAEYLDVHIGRGSNPDSVISSSGEAQVLESIDRGYLVASQTEE 521

Query: 180 RLHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDDRGI 296
            L Q+SS FQD L ++     N TK  E+ VI + D G+
Sbjct: 522 ELKQISSQFQDVLRVESSQQNNETKANEQTVITSMDGGL 560


>ref|XP_006441214.1| hypothetical protein CICLE_v10018879mg [Citrus clementina]
           gi|557543476|gb|ESR54454.1| hypothetical protein
           CICLE_v10018879mg [Citrus clementina]
          Length = 817

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLD-VNLVPSANGDGKVFDSIEKSYDNTQSPD 179
           R+++N EY+ S NGQ LH   LD +IS+G +  +++ S+  + +V +S+++SY     P+
Sbjct: 470 RSDANYEYDMSVNGQALHSGYLDVHISQGTEPASVISSSTVEAQVLESMDRSYLAAPQPE 529

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPN 281
           + L Q+SS F D+L L+ L H + +K +  +  P+
Sbjct: 530 KNLQQISSQFHDALRLNALEHNSESKGEVVKAEPS 564


>ref|XP_006441212.1| hypothetical protein CICLE_v10018879mg [Citrus clementina]
           gi|567897450|ref|XP_006441213.1| hypothetical protein
           CICLE_v10018879mg [Citrus clementina]
           gi|557543474|gb|ESR54452.1| hypothetical protein
           CICLE_v10018879mg [Citrus clementina]
           gi|557543475|gb|ESR54453.1| hypothetical protein
           CICLE_v10018879mg [Citrus clementina]
          Length = 815

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLD-VNLVPSANGDGKVFDSIEKSYDNTQSPD 179
           R+++N EY+ S NGQ LH   LD +IS+G +  +++ S+  + +V +S+++SY     P+
Sbjct: 468 RSDANYEYDMSVNGQALHSGYLDVHISQGTEPASVISSSTVEAQVLESMDRSYLAAPQPE 527

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPN 281
           + L Q+SS F D+L L+ L H + +K +  +  P+
Sbjct: 528 KNLQQISSQFHDALRLNALEHNSESKGEVVKAEPS 562


>ref|XP_006493180.1| PREDICTED: RNA polymerase II degradation factor 1-like isoform X4
           [Citrus sinensis]
          Length = 820

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLD-VNLVPSANGDGKVFDSIEKSYDNTQSPD 179
           R+++N EY+ S NGQ LH   LD +IS+G +  +++ S+  + +V +S+++SY     P+
Sbjct: 462 RSDANYEYDMSVNGQALHSGYLDVHISQGTEPASVISSSTVEAQVLESMDRSYLAAPQPE 521

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDDRGIE 299
           + + Q+SS F D++ L+ L H + +K   K      DRG++
Sbjct: 522 KNMQQISSQFHDAVRLNALEHNSESKNDMKLT----DRGLQ 558


>ref|XP_006493177.1| PREDICTED: RNA polymerase II degradation factor 1-like isoform X1
           [Citrus sinensis] gi|568880555|ref|XP_006493178.1|
           PREDICTED: RNA polymerase II degradation factor 1-like
           isoform X2 [Citrus sinensis]
           gi|568880557|ref|XP_006493179.1| PREDICTED: RNA
           polymerase II degradation factor 1-like isoform X3
           [Citrus sinensis]
          Length = 822

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLD-VNLVPSANGDGKVFDSIEKSYDNTQSPD 179
           R+++N EY+ S NGQ LH   LD +IS+G +  +++ S+  + +V +S+++SY     P+
Sbjct: 464 RSDANYEYDMSVNGQALHSGYLDVHISQGTEPASVISSSTVEAQVLESMDRSYLAAPQPE 523

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDDRGIE 299
           + + Q+SS F D++ L+ L H + +K   K      DRG++
Sbjct: 524 KNMQQISSQFHDAVRLNALEHNSESKNDMKLT----DRGLQ 560


>ref|XP_007220603.1| hypothetical protein PRUPE_ppa001350mg [Prunus persica]
           gi|462417065|gb|EMJ21802.1| hypothetical protein
           PRUPE_ppa001350mg [Prunus persica]
          Length = 847

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLDVN-LVPSANGDGKVFDSIEKSYDNTQSPD 179
           R++    YE S NGQ LH + LD  I++G + + ++ S++G+ +V  SI++ +  +  P+
Sbjct: 462 RSDVKYNYETSVNGQSLHQDYLDVQINQGAESDPVISSSSGEAQVLQSIDRGFLVSSQPE 521

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDDRGIE 299
           + L Q+SS F +SL LD L   + TK  E+ V      G+E
Sbjct: 522 QSLQQISSQFHNSLRLDSLEQNSETKASEQNVQTLTGHGLE 562


>gb|EYU45306.1| hypothetical protein MIMGU_mgv1a001376mg [Mimulus guttatus]
          Length = 831

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 41/103 (39%), Positives = 56/103 (54%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLDVNLVPSANGDGKVFDSIEKSYDNTQSPDR 182
           RT+ +  YEA  NGQ+   N  D+ +S      +VPS NG+G++  SI++S  N  S   
Sbjct: 458 RTDIHYGYEALVNGQV-RTNYSDAKVSPTDADPVVPSLNGEGQLHYSIDESNGNATSLQD 516

Query: 183 LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPNDDRGIETKRT 311
           L Q+SS F D+L LD L  GN TK +     P  D  +E K T
Sbjct: 517 LLQISSQFHDALRLDPLERGNDTKLKNDN--PVIDHRLENKIT 557


>ref|XP_006493181.1| PREDICTED: RNA polymerase II degradation factor 1-like isoform X5
           [Citrus sinensis]
          Length = 811

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/95 (32%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3   RTESNLEYEASGNGQILHVNDLDSNISRGLD-VNLVPSANGDGKVFDSIEKSYDNTQSPD 179
           R+++N EY+ S NGQ LH   LD +IS+G +  +++ S+  + +V +S+++SY     P+
Sbjct: 464 RSDANYEYDMSVNGQALHSGYLDVHISQGTEPASVISSSTVEAQVLESMDRSYLAAPQPE 523

Query: 180 R-LHQVSSHFQDSLTLDHLGHGNGTKPQEKQVIPN 281
           + + Q+SS F D++ L+ L H + +K +  +  P+
Sbjct: 524 KNMQQISSQFHDAVRLNALEHNSESKGEVIKAEPS 558


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