BLASTX nr result
ID: Mentha23_contig00020980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00020980
(592 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU31489.1| hypothetical protein MIMGU_mgv1a000779mg [Mimulus... 138 1e-30
ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s... 117 2e-24
ref|XP_004289653.1| PREDICTED: uncharacterized protein LOC101293... 112 6e-23
ref|XP_007200315.1| hypothetical protein PRUPE_ppa001214mg [Prun... 111 2e-22
ref|XP_007042088.1| RNA-binding family protein, putative [Theobr... 110 2e-22
emb|CBI38027.3| unnamed protein product [Vitis vinifera] 110 4e-22
ref|XP_004308441.1| PREDICTED: uncharacterized protein LOC101294... 109 5e-22
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257... 109 5e-22
ref|XP_007133809.1| hypothetical protein PHAVU_011G210900g [Phas... 109 6e-22
ref|XP_004510994.1| PREDICTED: RNA-binding protein 28-like [Cice... 109 6e-22
ref|XP_006594407.1| PREDICTED: RNA-binding protein 28-like isofo... 108 1e-21
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like isofo... 108 1e-21
ref|XP_006592958.1| PREDICTED: RNA-binding protein 28-like isofo... 107 2e-21
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like isofo... 107 2e-21
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu... 107 2e-21
ref|XP_002313773.2| RNA recognition motif-containing family prot... 107 2e-21
ref|XP_006362045.1| PREDICTED: RNA-binding protein 28-like [Sola... 106 5e-21
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi... 105 1e-20
ref|XP_002880379.1| RNA recognition motif-containing protein [Ar... 105 1e-20
ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isofo... 103 4e-20
>gb|EYU31489.1| hypothetical protein MIMGU_mgv1a000779mg [Mimulus guttatus]
Length = 988
Score = 138 bits (348), Expect = 1e-30
Identities = 80/133 (60%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIKIL SRPRGVAFLEFTEH+HALVALRVLNNNP+ FDPEHRPIVEF
Sbjct: 678 IRQIKILQDDSKKVKEGEKSRPRGVAFLEFTEHQHALVALRVLNNNPDTFDPEHRPIVEF 737
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARD-NFRQNNPIGRVGPFANSNSRNRMSRDGDASL 359
AL+NVQKLK RAEK+Q QQ+Q NA + +QN RVGP ++ SR R D D S
Sbjct: 738 ALENVQKLKQRAEKLQYQQQQAFRNAAEGGSQQNGRSRRVGPPSDMKSRTRNFEDVD-SY 796
Query: 360 METSDNRKGKFEN 398
+ N+K K EN
Sbjct: 797 SKPFVNKKRKSEN 809
>ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula] gi|355480031|gb|AES61234.1| Eukaryotic
translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 962
Score = 117 bits (293), Expect = 2e-24
Identities = 63/114 (55%), Positives = 75/114 (65%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIKIL RGVAFLEF+EH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 685 IRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEF 744
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRD 344
ALDN+QKLKLR EK+Q QQ + P+N +N+ G + + R R S++
Sbjct: 745 ALDNIQKLKLRNEKLQYQQ-RAPHNGNSR-NENDKPNNAGVYTHGTDRKRKSQE 796
>ref|XP_004289653.1| PREDICTED: uncharacterized protein LOC101293353 [Fragaria vesca
subsp. vesca]
Length = 1023
Score = 112 bits (281), Expect = 6e-23
Identities = 66/141 (46%), Positives = 81/141 (57%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L + RGVAF+EFTEH+HALVALRVLNNNPE F EHRPIVEF
Sbjct: 758 IRQIKCLKDVKKGNIVTK-NHSRGVAFIEFTEHQHALVALRVLNNNPETFGSEHRPIVEF 816
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLM 362
ALDNVQKL+ R Q QQ N ++ RQ +P+ R + R + L
Sbjct: 817 ALDNVQKLRARQVSQQTQQHAANGNQKE-VRQFDPLNRADANPSKKFEKRRDKGSKRKLD 875
Query: 363 ETSDNRKGKFENRSRLGMVSE 425
E N++G+ ENR+ G +E
Sbjct: 876 EVVPNKEGEVENRTSDGAATE 896
>ref|XP_007200315.1| hypothetical protein PRUPE_ppa001214mg [Prunus persica]
gi|462395715|gb|EMJ01514.1| hypothetical protein
PRUPE_ppa001214mg [Prunus persica]
Length = 879
Score = 111 bits (277), Expect = 2e-22
Identities = 68/167 (40%), Positives = 89/167 (53%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQEQG 248
RG AF+EFTEH+HALVALRVLNNNPE F PEHRPIVEFAL+NV+KL +R KIQAQQ
Sbjct: 614 RGAAFVEFTEHQHALVALRVLNNNPETFGPEHRPIVEFALENVKKLNIRNAKIQAQQ-HA 672
Query: 249 PYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGKFENRSRLGMVSEE 428
Y R+N QN R + S+N + G+ ++ S K + EN+ G +E
Sbjct: 673 AYRNRENVDQNEGSNRPDTHPSKKSKNSKQK-GEKRKLDDSVPNKEEVENKFSDGAATER 731
Query: 429 XXXXXXXXXXXXXSRVLPEKKSNTQVSEQFVPKGVRANTFDKKERRD 569
EKK + +VSE + + + +D
Sbjct: 732 HRGSKRQKNGPFGK----EKKISAKVSEHSTTEKAEGSKREPNNHQD 774
>ref|XP_007042088.1| RNA-binding family protein, putative [Theobroma cacao]
gi|508706023|gb|EOX97919.1| RNA-binding family protein,
putative [Theobroma cacao]
Length = 953
Score = 110 bits (276), Expect = 2e-22
Identities = 70/134 (52%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L ++ RGVAF+EFTEH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 669 IRQIKFLKSVKKGKLVIK-NQSRGVAFVEFTEHQHALVALRVLNNNPETFGPEHRPIVEF 727
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARD--NFRQNNPIGRVGPFANSNSRNRMSRDGDAS 356
A+DNVQ LKLR K+QAQQ G RD N Q N + SR R SRD D
Sbjct: 728 AVDNVQTLKLRKAKLQAQQLDG----RDDMNNAQQNAESNSFDAHPTKSRKRKSRD-DKR 782
Query: 357 LMETSDNRKGKFEN 398
+ + + +K + EN
Sbjct: 783 VTKQPEFKKAEMEN 796
>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
Length = 918
Score = 110 bits (274), Expect = 4e-22
Identities = 66/145 (45%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
I+QIK L + RGVAF+EFTEH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 679 IKQIKFLKDMKKGKVVTK-NHSRGVAFIEFTEHQHALVALRVLNNNPETFGPEHRPIVEF 737
Query: 183 ALDNVQKLKLRAEKIQAQQEQG---PYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDA 353
ALDN+Q L+ R K++A Q+ P + + N N P P SR R SRD D
Sbjct: 738 ALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTP--EASPNKKMKSRKRKSRDNDG 795
Query: 354 SLMETSDNRKGKFENRSRLGMVSEE 428
L + N + E++ G +E
Sbjct: 796 PLKTSEPNEGDEPEDKVIKGAPDDE 820
>ref|XP_004308441.1| PREDICTED: uncharacterized protein LOC101294023 [Fragaria vesca
subsp. vesca]
Length = 1035
Score = 109 bits (273), Expect = 5e-22
Identities = 64/134 (47%), Positives = 78/134 (58%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L + RGVAF+EFTEH+HALVALRVLNNNPE F EHRPIVEF
Sbjct: 757 IRQIKCLKDVKKGKIVTK-NHSRGVAFIEFTEHQHALVALRVLNNNPETFGSEHRPIVEF 815
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLM 362
ALDNVQKL+ R Q QQ N ++ RQ +P+ R + R + L
Sbjct: 816 ALDNVQKLRARQVSQQTQQHAANGNQKE-VRQFDPLNRADANPSKKFEKRRDKGEKRKLD 874
Query: 363 ETSDNRKGKFENRS 404
E N++G+ ENR+
Sbjct: 875 EVVPNKEGEVENRT 888
>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 109 bits (273), Expect = 5e-22
Identities = 66/142 (46%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
I+QIK L + RGVAF+EFTEH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 698 IKQIKFLKDMKKGKVVTK-NHSRGVAFIEFTEHQHALVALRVLNNNPETFGPEHRPIVEF 756
Query: 183 ALDNVQKLKLRAEKIQAQQEQG---PYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDA 353
ALDN+Q L+ R K++A Q+ P + + N N P P SR R SRD D
Sbjct: 757 ALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTP--EASPNKKMKSRKRKSRDNDG 814
Query: 354 SLMETSDNRKGKFENRSRLGMV 419
L + N + E++ G V
Sbjct: 815 PLKTSEPNEGDEPEDKVIKGAV 836
>ref|XP_007133809.1| hypothetical protein PHAVU_011G210900g [Phaseolus vulgaris]
gi|593263262|ref|XP_007133810.1| hypothetical protein
PHAVU_011G210900g [Phaseolus vulgaris]
gi|561006809|gb|ESW05803.1| hypothetical protein
PHAVU_011G210900g [Phaseolus vulgaris]
gi|561006810|gb|ESW05804.1| hypothetical protein
PHAVU_011G210900g [Phaseolus vulgaris]
Length = 962
Score = 109 bits (272), Expect = 6e-22
Identities = 58/109 (53%), Positives = 72/109 (66%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQEQG 248
RGVAF+EF+EH+HALVALRVLNNNPE F PEHRPIVEFALDNVQ LKLR K+Q Q+Q
Sbjct: 713 RGVAFIEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQQFQQQA 772
Query: 249 PYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGKFE 395
P + + R + P + ++ R R +R+ ET N G+ E
Sbjct: 773 PQDDNNAMRNDKPGNKE---VHTPDRKRKAREHGEPAKETVLNTNGESE 818
>ref|XP_004510994.1| PREDICTED: RNA-binding protein 28-like [Cicer arietinum]
Length = 962
Score = 109 bits (272), Expect = 6e-22
Identities = 78/208 (37%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQ+K+L RGVAFLEF+EH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 691 IRQLKLLKDGRKGKVTQE-QYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEF 749
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLM 362
ALDNVQ LKLR ++Q+QQ Q PY+ +N +N+ + R R S++ D
Sbjct: 750 ALDNVQTLKLRNARLQSQQ-QAPYD-DNNGNENDKPDNAEVHTHVKDRKRKSQEHDKPAK 807
Query: 363 ETSDN----RKGKFEN-RSRLGMVSEEXXXXXXXXXXXXXSRVLPEKKSNTQVSEQFVPK 527
+++ N + GK N +S G S+ + L K N Q + K
Sbjct: 808 DSTQNSYSEQGGKVSNGKSPQGGKSKRQKPNTGVLSLKESPKALVRKVKNNQDGQNHSAK 867
Query: 528 -------GVRANTFDKKERRDEGMQRKR 590
+ +N K ++D+ + KR
Sbjct: 868 LHEGRNTVIDSNNRKKSGKKDDVVNGKR 895
>ref|XP_006594407.1| PREDICTED: RNA-binding protein 28-like isoform X2 [Glycine max]
Length = 955
Score = 108 bits (270), Expect = 1e-21
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQE-- 242
RGVAF+EF+EH+HALVALRVLNNNPE F PEHRPIVEFALDNVQ LKLR K+Q+Q +
Sbjct: 704 RGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQLQAP 763
Query: 243 QGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGK 389
Q NA DN + G V +R R S++ D ME++ N G+
Sbjct: 764 QDDNNAMDNDKP----GTVEGHKPVKNRKRKSQEHDKPAMESALNTNGE 808
>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Glycine max]
Length = 956
Score = 108 bits (270), Expect = 1e-21
Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQE-- 242
RGVAF+EF+EH+HALVALRVLNNNPE F PEHRPIVEFALDNVQ LKLR K+Q+Q +
Sbjct: 705 RGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQLQAP 764
Query: 243 QGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGK 389
Q NA DN + G V +R R S++ D ME++ N G+
Sbjct: 765 QDDNNAMDNDKP----GTVEGHKPVKNRKRKSQEHDKPAMESALNTNGE 809
>ref|XP_006592958.1| PREDICTED: RNA-binding protein 28-like isoform X2 [Glycine max]
Length = 934
Score = 107 bits (268), Expect = 2e-21
Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQE-- 242
RGVAF+EF+EH+HALVALRVLNNNPE F PEHRPIVEFALDNVQ LKLR K+Q+Q +
Sbjct: 682 RGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQHQTP 741
Query: 243 QGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGK 389
Q NA DN +NP G V R R SR+ D E+ N G+
Sbjct: 742 QVDNNAMDN---DNP-GTVEGCKPVKDRKRKSREHDEPAKESVLNTNGE 786
>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Glycine max]
Length = 958
Score = 107 bits (268), Expect = 2e-21
Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQE-- 242
RGVAF+EF+EH+HALVALRVLNNNPE F PEHRPIVEFALDNVQ LKLR K+Q+Q +
Sbjct: 706 RGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQSQHQTP 765
Query: 243 QGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGK 389
Q NA DN +NP G V R R SR+ D E+ N G+
Sbjct: 766 QVDNNAMDN---DNP-GTVEGCKPVKDRKRKSREHDEPAKESVLNTNGE 810
>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
gi|223547969|gb|EEF49461.1| RNA-binding protein, putative
[Ricinus communis]
Length = 916
Score = 107 bits (268), Expect = 2e-21
Identities = 70/145 (48%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L SR GVAF+EFTEH+HALVALRVLNNNPE F PEHRPIVEF
Sbjct: 630 IRQIKFLQSTKTGKVTKNHSR--GVAFIEFTEHQHALVALRVLNNNPETFGPEHRPIVEF 687
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNAR---DNFRQNNPIGRVGPFANSNSRNRMSRDGDA 353
A+DNVQKLK R K+ AQQ+ +++ DN + P P N R SR D
Sbjct: 688 AVDNVQKLKFRKAKLHAQQQDNNADSKDMQDNIESHAP--NDIPGEKENFRKWKSR-ADN 744
Query: 354 SLMETSDNRKGKFENRSRLGMVSEE 428
M+TS+ + + E G SE+
Sbjct: 745 RAMKTSEPNETEVEILVSEGTSSEK 769
>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550331582|gb|EEE87728.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 974
Score = 107 bits (267), Expect = 2e-21
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQEQG 248
RGVAF+EFTEH+HALVALRVLNNNPE F PEHRPIV FALDNVQ LKLR K+Q QQ++
Sbjct: 714 RGVAFVEFTEHQHALVALRVLNNNPETFGPEHRPIVSFALDNVQTLKLRKAKLQVQQQET 773
Query: 249 PYNARDNFRQN-NPIGRVGPFANSNSRNRMSRDGDASLMETSDNRKGKFENRSRLGMVSE 425
+ +D + + P SR R SR + ++ + NR + +N+ +
Sbjct: 774 HKDFQDTQENDESQTPNAIPSQKEMSRKRKSRVENRAVKDPESNRMDEVKNKDSYRTSLK 833
Query: 426 EXXXXXXXXXXXXXSRVLPEKKSNTQVSEQFVPKGVRANTFDKKERRDE---GMQRKR 590
E + +KKSN + ++ + DK+E R + G Q K+
Sbjct: 834 E--------------QTAKKKKSNPGAED------IQTSAKDKRESRKQKAKGSQHKQ 871
>ref|XP_006362045.1| PREDICTED: RNA-binding protein 28-like [Solanum tuberosum]
Length = 1015
Score = 106 bits (264), Expect = 5e-21
Identities = 76/195 (38%), Positives = 104/195 (53%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L + RGVAFLEF+EHEHALVALRVLNNNPE F PEHRPIVEF
Sbjct: 734 IRQIKFLKDVKKGQAVAK-NHSRGVAFLEFSEHEHALVALRVLNNNPETFGPEHRPIVEF 792
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDASLM 362
ALDN+Q +KLR Q Q+QG +++ ++N+ P RN+ SR A+
Sbjct: 793 ALDNIQTMKLR----QKFQQQGFNRNKEDLQKNDNTNERDP------RNKQSRKRKATGE 842
Query: 363 ETSDNRKGKFENRSRLGMVSEEXXXXXXXXXXXXXSRVLPEKKSNTQVSEQFVPKGVRAN 542
+ ++N++ + SR G VS S+++ Q KGV+
Sbjct: 843 DEANNKRVRGAT-SREGNVS---------------------SVSSSKDGNQPENKGVKGA 880
Query: 543 TFDKKERRDEGMQRK 587
TF +ER ++ ++K
Sbjct: 881 TFSAEERDEKKNKKK 895
>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
thaliana] gi|16604631|gb|AAL24108.1| unknown protein
[Arabidopsis thaliana] gi|27754736|gb|AAO22811.1| unknown
protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 105 bits (261), Expect = 1e-20
Identities = 59/116 (50%), Positives = 72/116 (62%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L + RGVAF+EFTEHEHALVALRVLNNNPE F P+HRP++EF
Sbjct: 748 IRQIKFLQNEKKGKVDTK-NYSRGVAFVEFTEHEHALVALRVLNNNPETFGPQHRPVIEF 806
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGD 350
A+DNVQKLK+R K Q Q++ +N D + N A N R +R+GD
Sbjct: 807 AVDNVQKLKIREAKQQQFQQREKHNESDQQQANGEAQ-----APDNKYKRKTREGD 857
>ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297326218|gb|EFH56638.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 105 bits (261), Expect = 1e-20
Identities = 59/118 (50%), Positives = 73/118 (61%)
Frame = +3
Query: 3 IRQIKILXXXXXXXXXXXXSRPRGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEF 182
IRQIK L + RGVAF+EFTEHEHALVALRVLNNNPE F P+HRP++EF
Sbjct: 731 IRQIKFLQNEKKGKVDTK-NYSRGVAFVEFTEHEHALVALRVLNNNPETFGPQHRPVIEF 789
Query: 183 ALDNVQKLKLRAEKIQAQQEQGPYNARDNFRQNNPIGRVGPFANSNSRNRMSRDGDAS 356
A+DNVQKLK+R K Q Q++ +N + + N A N R +R+GD S
Sbjct: 790 AVDNVQKLKIREAKQQQFQQRDKHNESEQQQSNGEAQ-----APDNKYKRKTREGDNS 842
>ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isoform X4 [Citrus sinensis]
Length = 819
Score = 103 bits (257), Expect = 4e-20
Identities = 62/129 (48%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Frame = +3
Query: 69 RGVAFLEFTEHEHALVALRVLNNNPEIFDPEHRPIVEFALDNVQKLKLRAEKIQAQQEQG 248
RGVAF+EFTEH+HALVALRVLNNNP+ F PEHRPIVEFA+DNVQ LK R KIQAQQ+Q
Sbjct: 568 RGVAFVEFTEHQHALVALRVLNNNPKTFGPEHRPIVEFAVDNVQTLKQRNAKIQAQQQQN 627
Query: 249 PY--------NARDNFRQNNPIGRVGPFANS-NSRNRMSRDGDASLMETSDNRKGKFENR 401
N + R+ PIG +S + + + DG + E N+K K +
Sbjct: 628 DESNTMDTYPNKLEKSRKRKPIGDSRSEKDSGHGEDSVVNDG---VQEGKINKKHKANKK 684
Query: 402 SRLGMVSEE 428
+ S+E
Sbjct: 685 QKHNPASDE 693