BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00020663
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus...   138   9e-31
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...   116   3e-24
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...   116   3e-24
ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...    99   6e-19
gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlise...    99   8e-19
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun...    99   8e-19
gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus...    98   1e-18
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...    97   2e-18
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...    97   2e-18
ref|XP_002307429.2| basal transcription factor complex subunit-r...    91   2e-16
ref|XP_002532948.1| RNA polymerase II transcription factor B sub...    90   4e-16
ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, par...    88   1e-15
ref|XP_007019037.1| Basal transcription factor complex subunit-r...    88   1e-15
ref|XP_007019036.1| Basal transcription factor complex subunit-r...    88   1e-15
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ...    86   4e-15
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ...    86   4e-15
ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Caps...    85   9e-15
ref|XP_004170865.1| PREDICTED: general transcription factor IIH ...    84   3e-14
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ...    84   3e-14
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab...    83   4e-14

>gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus guttatus]
          Length = 295

 Score =  138 bits (347), Expect = 9e-31
 Identities = 69/99 (69%), Positives = 78/99 (78%)
 Frame = -3

Query: 298 VQPTLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAEDLL 119
           V+  LPFSKF++HVLAFLNSILL+NQ NQVVV+A+G+NSC Y+FDSS  QSQNQRAE LL
Sbjct: 30  VKSNLPFSKFISHVLAFLNSILLVNQQNQVVVLATGHNSCDYVFDSSVAQSQNQRAEHLL 89

Query: 118 HKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
            KLEEFVD D+ LCREESVDG GF          LCYIQ
Sbjct: 90  QKLEEFVDKDESLCREESVDGQGFSLLSGSLSMALCYIQ 128


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           tuberosum]
          Length = 290

 Score =  116 bits (291), Expect = 3e-24
 Identities = 62/93 (66%), Positives = 70/93 (75%)
 Frame = -3

Query: 280 FSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAEDLLHKLEEF 101
           F KF++HVLAFLNSILLLNQMNQVVVIA+GYNSC Y+FDSS   S  QRAE LL KLE+F
Sbjct: 37  FPKFISHVLAFLNSILLLNQMNQVVVIATGYNSCDYVFDSS--TSSMQRAECLLEKLEDF 94

Query: 100 VDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
           VD D+ L +E+SVDG GF          LCYIQ
Sbjct: 95  VDKDESLSQEDSVDGVGFSLLSGSLSMALCYIQ 127


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           lycopersicum]
          Length = 290

 Score =  116 bits (291), Expect = 3e-24
 Identities = 62/93 (66%), Positives = 70/93 (75%)
 Frame = -3

Query: 280 FSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAEDLLHKLEEF 101
           F KF++HVLAFLNSILLLNQMNQVVVIA+GYNSC Y+FDSS   S  QRAE LL KLE+F
Sbjct: 37  FPKFISHVLAFLNSILLLNQMNQVVVIATGYNSCDYVFDSS--TSSMQRAECLLEKLEDF 94

Query: 100 VDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
           VD D+ L +E+SVDG GF          LCYIQ
Sbjct: 95  VDKDESLSQEDSVDGVGFSLLSGALSMALCYIQ 127


>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSS----DPQSQNQR---- 134
           +LPFSKFL+HVLAFLNSILL+NQ+NQVVVIA+G NSC++IFDSS    +P  +N R    
Sbjct: 31  SLPFSKFLSHVLAFLNSILLINQLNQVVVIATGCNSCNFIFDSSSVPANPNLENGRMPAL 90

Query: 133 AEDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             +LL KLEEFV  D++L +E    G G           LCYIQ
Sbjct: 91  CSNLLQKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMALCYIQ 134


>gb|EPS73731.1| hypothetical protein M569_01027, partial [Genlisea aurea]
          Length = 208

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/100 (50%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 VQPTLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQR-AEDL 122
           ++   PFS FL+HV++FLN+ILLLN +N VVVIA+G++ C +IFDS+  Q+Q+Q   E L
Sbjct: 30  LKSAFPFSNFLSHVVSFLNAILLLNPLNHVVVIATGFSYCDFIFDSTTSQNQSQHCGETL 89

Query: 121 LHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
           L +LEEFV+ D+ +CR  SV G  F          LCYIQ
Sbjct: 90  LQRLEEFVEKDESMCRVSSVHGSCFSLLSGSLSMALCYIQ 129


>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
           gi|462420187|gb|EMJ24450.1| hypothetical protein
           PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQ-------RA 131
           +LPFS FL+HVL FLNSILLLNQ+NQVVVIA+GYNSCSYI+DSS   +Q         R 
Sbjct: 31  SLPFSVFLSHVLTFLNSILLLNQLNQVVVIATGYNSCSYIYDSSTSTNQGSDNGRMPARC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
            +LL KLEEFV  D++L +E   +G             LCYIQ
Sbjct: 91  VNLLQKLEEFVIEDEQLIKEGLREGIASSLLSGSLSMALCYIQ 133


>gb|EXB44374.1| General transcription factor IIH subunit 3 [Morus notabilis]
          Length = 236

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQS---QNQR----A 131
           +LPFS FL+HVL+FLNSILLLNQ+NQV VIA+GYNSC YIFDSS   S   +N R     
Sbjct: 31  SLPFSNFLSHVLSFLNSILLLNQLNQVAVIATGYNSCDYIFDSSVSTSRGLENGRMPALC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDG 56
            +LL KLEEFV  D++LC+E S +G
Sbjct: 91  SNLLQKLEEFVVRDEQLCKEGSENG 115


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           2 [Fragaria vesca subsp. vesca]
          Length = 298

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/103 (52%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQ-------RA 131
           +LPFSK+L+HVL FLNSILLLNQ+NQVVVIA+GY+SCSYI+DS+    Q           
Sbjct: 31  SLPFSKYLSHVLTFLNSILLLNQLNQVVVIATGYSSCSYIYDSASAPGQGSDQGRMPALC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             LL KLEEFV  D++L +E S +G             LCYIQ
Sbjct: 91  SHLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQ 133


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           1 [Fragaria vesca subsp. vesca]
          Length = 300

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/103 (52%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQ-------RA 131
           +LPFSK+L+HVL FLNSILLLNQ+NQVVVIA+GY+SCSYI+DS+    Q           
Sbjct: 31  SLPFSKYLSHVLTFLNSILLLNQLNQVVVIATGYSSCSYIYDSASAPGQGSDQGRMPALC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             LL KLEEFV  D++L +E S +G             LCYIQ
Sbjct: 91  SHLLKKLEEFVAKDEQLLKEGSAEGIPSSLLSGSLSMALCYIQ 133


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAE------ 128
           +L FS+FL+HVLAF+NSILLLNQ+NQVVVIASGYN+C YI+DSS   SQ    +      
Sbjct: 32  SLSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTCDYIYDSSSDASQLGSEDGRMPSL 91

Query: 127 --DLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             +LL KLEEF+  D++L +E+S                LCYIQ
Sbjct: 92  YSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMALCYIQ 135


>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
           communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
           transcription factor B subunit, putative [Ricinus
           communis]
          Length = 266

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSS---DPQSQNQRA---- 131
           +LPFS+FL+HVLAFLNSILLLNQ+NQVVVIA+GYNSC YI+DSS   +  S   R     
Sbjct: 31  SLPFSQFLSHVLAFLNSILLLNQLNQVVVIANGYNSCDYIYDSSLVMNHSSDEGRIPALY 90

Query: 130 EDLLHKLEEFVDNDKELCR-EESVDGPGFXXXXXXXXXXLCYIQ 2
            DLL KLE+F+  D++L + EES                LCYIQ
Sbjct: 91  SDLLQKLEDFMIRDEKLGKGEESKRKIASSLLSGSLSMALCYIQ 134


>ref|XP_006434174.1| hypothetical protein CICLE_v100020021mg, partial [Citrus
           clementina] gi|557536296|gb|ESR47414.1| hypothetical
           protein CICLE_v100020021mg, partial [Citrus clementina]
          Length = 174

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQN-------QRA 131
           +L FS+FLTHVLAFLN+IL LNQ+NQVVVIA+GYNSC Y++DSS   +Q+          
Sbjct: 31  SLSFSQFLTHVLAFLNAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVGNGRMPSLC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             LL  LEEF++ D++L ++E                 LCYIQ
Sbjct: 91  ATLLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALCYIQ 133


>ref|XP_007019037.1| Basal transcription factor complex subunit-related isoform 2
           [Theobroma cacao] gi|508724365|gb|EOY16262.1| Basal
           transcription factor complex subunit-related isoform 2
           [Theobroma cacao]
          Length = 274

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQN-------QRA 131
           +L FS+FL+HVLAFLN+IL LNQ+NQVVVIA+GYNSC+YIFDSS   +Q+          
Sbjct: 31  SLSFSQFLSHVLAFLNAILTLNQLNQVVVIATGYNSCNYIFDSSSDLNQSFENGRMPVMC 90

Query: 130 EDLLHKLEEFVDNDKELCRE 71
             LL KLEEF+  D++L +E
Sbjct: 91  SSLLQKLEEFLIKDEQLSKE 110


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 7/80 (8%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQN-------QRA 131
           +L FS+FL+HVLAFLN+IL LNQ+NQVVVIA+GYNSC+YIFDSS   +Q+          
Sbjct: 31  SLSFSQFLSHVLAFLNAILTLNQLNQVVVIATGYNSCNYIFDSSSDLNQSFENGRMPVMC 90

Query: 130 EDLLHKLEEFVDNDKELCRE 71
             LL KLEEF+  D++L +E
Sbjct: 91  SSLLQKLEEFLIKDEQLSKE 110


>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X2 [Citrus sinensis]
          Length = 293

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQN-------QRA 131
           +L FS+FLTHVLAF N+IL LNQ+NQVVVIA+GYNSC Y++DSS   +Q+          
Sbjct: 31  SLSFSQFLTHVLAFFNAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVGNGRMPSLC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             LL  LEEF++ D++L ++E                 LCYIQ
Sbjct: 91  ATLLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALCYIQ 133


>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X1 [Citrus sinensis]
          Length = 298

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQN-------QRA 131
           +L FS+FLTHVLAF N+IL LNQ+NQVVVIA+GYNSC Y++DSS   +Q+          
Sbjct: 31  SLSFSQFLTHVLAFFNAILTLNQLNQVVVIATGYNSCDYVYDSSSTGNQSVGNGRMPSLC 90

Query: 130 EDLLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
             LL  LEEF++ D++L ++E                 LCYIQ
Sbjct: 91  ATLLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALCYIQ 133


>ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Capsella rubella]
           gi|482574167|gb|EOA38354.1| hypothetical protein
           CARUB_v10009867mg [Capsella rubella]
          Length = 301

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 10/84 (11%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAED----- 125
           ++ FS+FL+HVLAFLN++L LNQ+NQVVVIA+GY+SC YI+DSS   +      D     
Sbjct: 31  SITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSSCEYIYDSSLTSNHGSFERDRTGMP 90

Query: 124 -----LLHKLEEFVDNDKELCREE 68
                LL+KLE+FV  D+EL REE
Sbjct: 91  PLFASLLNKLEDFVTKDEELSREE 114


>ref|XP_004170865.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 187

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
 Frame = -3

Query: 286 LPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAED------ 125
           LPFSKFL+HVLAFLNSIL+LNQ+N+VVVI +GY SC Y+++SS     N   ED      
Sbjct: 32  LPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSS--SYSNHGLEDGRMPAL 89

Query: 124 ---LLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
              LL  LEEFV  D++  +E+   G             LCYIQ
Sbjct: 90  CTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQ 133


>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 295

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
 Frame = -3

Query: 286 LPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAED------ 125
           LPFSKFL+HVLAFLNSIL+LNQ+N+VVVI +GY SC Y+++SS     N   ED      
Sbjct: 32  LPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSS--SYSNHGLEDGRMPAL 89

Query: 124 ---LLHKLEEFVDNDKELCREESVDGPGFXXXXXXXXXXLCYIQ 2
              LL  LEEFV  D++  +E+   G             LCYIQ
Sbjct: 90  CTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQ 133


>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
           lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
           ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
 Frame = -3

Query: 289 TLPFSKFLTHVLAFLNSILLLNQMNQVVVIASGYNSCSYIFDSSDPQSQNQRAED----- 125
           ++ FS+FL+HVLAFLN++L LNQ+NQVVVIA+GY+SC YI+DSS   +      +     
Sbjct: 31  SITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSSCDYIYDSSLTSNHGNLESNGTGMP 90

Query: 124 -----LLHKLEEFVDNDKELCREE-SVDGPGFXXXXXXXXXXLCYIQ 2
                LL KLE+FV  D+EL REE S D              LCYIQ
Sbjct: 91  ALFGSLLKKLEDFVTKDEELSREEVSEDRIPSCLLSGSLSMALCYIQ 137