BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00018741
         (1170 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   379   e-102
gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlise...   329   2e-87
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   326   1e-86
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   326   1e-86
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   323   9e-86
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...   320   6e-85
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   320   7e-85
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   318   3e-84
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   318   3e-84
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   317   5e-84
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   317   6e-84
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   316   1e-83
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   316   1e-83
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   313   9e-83
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           310   6e-82
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           310   8e-82
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]       307   6e-81
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian...   307   6e-81
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   306   1e-80
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   303   9e-80

>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  379 bits (972), Expect = e-102
 Identities = 201/326 (61%), Positives = 218/326 (66%), Gaps = 5/326 (1%)
 Frame = +2

Query: 5   MAAEDRTNSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXND 184
           MAAE R NS   Q EN+  +L +Y            KNVE                   D
Sbjct: 1   MAAESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKD 60

Query: 185 VLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSG 364
           VLFEDEWLIAVNKP GIYCE            DQ         KLQELHLSNRLDRDTSG
Sbjct: 61  VLFEDEWLIAVNKPNGIYCETILSSVQILLNTDQ--------VKLQELHLSNRLDRDTSG 112

Query: 365 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 544
           V ++TKSHKVAAKLVKAFT+HMVKKTYLA CVG+ PKW  +IIKSGHGRSKHGAWRVYA 
Sbjct: 113 VILITKSHKVAAKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAY 172

Query: 545 SDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKN-----GXXXXXXXXXXXXXXXXX 709
           SD GR LPGGSFVRDMET F+VLSVNGK CS  S+ N                       
Sbjct: 173 SDVGRVLPGGSFVRDMETSFDVLSVNGKSCSQESDANHEEEEKIVAEEKSEVVGSCCSDE 232

Query: 710 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 889
              V+VRA+PRSGRTHQIRLHCQYLGIPI GDVKY+GVYEWKDR YEGHELHAE+LSFEH
Sbjct: 233 RDEVVVRAHPRSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEH 292

Query: 890 PVTGQSVLIHAPLPLWASEELAKVCL 967
           P+TGQSV I APLPLWAS+ LA+  L
Sbjct: 293 PITGQSVFIQAPLPLWASQALAQAQL 318


>gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlisea aurea]
          Length = 307

 Score =  329 bits (843), Expect = 2e-87
 Identities = 174/311 (55%), Positives = 203/311 (65%), Gaps = 7/311 (2%)
 Frame = +2

Query: 35  PVQSENSSP------TLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFE 196
           P+ S  +SP      TLG+Y            K+VE                  NDVLFE
Sbjct: 5   PMSSLEASPEKSAAETLGNYPAPLSPPPPPISKDVELSRALTASSSSALFSLSENDVLFE 64

Query: 197 DEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVV 376
           DEWLIAVNKP GIYCE               + +    A+ QELHLSNRLDRDTSGVT+V
Sbjct: 65  DEWLIAVNKPPGIYCESILSSVR--------TFLNSVPARTQELHLSNRLDRDTSGVTLV 116

Query: 377 TKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAG 556
           TKSHKVAAKLVK FTDH V+KTY+A C+G+ P+   I++KSGHGRSKHGAWRVYA SD  
Sbjct: 117 TKSHKVAAKLVKTFTDHKVQKTYIASCIGTPPETHSILVKSGHGRSKHGAWRVYAFSDIA 176

Query: 557 RTLPGGSFVRDMETYFEVLSVNGKGCSLGS-EKNGXXXXXXXXXXXXXXXXXXXXVLVRA 733
           R LPGGS +R+MET F+V++VNG+  S  S + +                     V+VRA
Sbjct: 177 RKLPGGSLIREMETLFQVIAVNGEKISSPSPDSDHQHIVVEAKSRISSDSDKASEVIVRA 236

Query: 734 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 913
           YP+SGRTHQIRLHCQYLGIPIRGDVKYDGVYEW  R YE H+LHAESLSFEHPVTG S++
Sbjct: 237 YPKSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWGGRKYECHQLHAESLSFEHPVTGHSLV 296

Query: 914 IHAPLPLWASE 946
           I APLPLWA +
Sbjct: 297 IQAPLPLWAQQ 307


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
           gi|462401230|gb|EMJ06787.1| hypothetical protein
           PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  326 bits (835), Expect = 1e-86
 Identities = 169/307 (55%), Positives = 199/307 (64%), Gaps = 4/307 (1%)
 Frame = +2

Query: 44  SENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 223
           S+N+  T  +Y            K++E                  +DV+FED+WLI VNK
Sbjct: 12  SQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNK 71

Query: 224 PCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 403
           P G+YCE               S  P  Q    ELHL+NRLDRDTSG+ V+TKSHKVA+K
Sbjct: 72  PQGVYCESVLESVPQLLCDSAESGTPANQL---ELHLANRLDRDTSGLMVITKSHKVASK 128

Query: 404 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 583
           LVKAFTDH + KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 129 LVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMV 188

Query: 584 RDMETYFEVLSVNGKGCSLGS----EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 751
           RDMET FEVLS+NG+G SL      +K+                     +LVRA PRSGR
Sbjct: 189 RDMETSFEVLSINGQG-SLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPRSGR 247

Query: 752 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 931
           THQIRLHCQYLGI IRGDVKY+GVYEWK R Y+GHELHAESLSFEHP+TG  V+  AP+P
Sbjct: 248 THQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVP 307

Query: 932 LWASEEL 952
            WAS+ L
Sbjct: 308 SWASQAL 314


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  326 bits (835), Expect = 1e-86
 Identities = 161/258 (62%), Positives = 186/258 (72%), Gaps = 2/258 (0%)
 Frame = +2

Query: 185 VLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSG 364
           V+FEDEW+IAVNKP GIYCE                ++ +  A + ELHL+NRLDRDTSG
Sbjct: 54  VIFEDEWIIAVNKPQGIYCESVLSSLP--------DLLNDTGANVSELHLANRLDRDTSG 105

Query: 365 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 544
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 106 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 165

Query: 545 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 718
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 166 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKDEDIVIVQEKSVIGCDLKKDE 225

Query: 719 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 898
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK  +Y+ HELHAESLSFEHP+T
Sbjct: 226 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPIT 285

Query: 899 GQSVLIHAPLPLWASEEL 952
           G+S+L+ APLP WA + L
Sbjct: 286 GKSMLLQAPLPSWAIQPL 303


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  323 bits (828), Expect = 9e-86
 Identities = 166/303 (54%), Positives = 195/303 (64%), Gaps = 4/303 (1%)
 Frame = +2

Query: 44  SENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 223
           S+N   TL +Y            K +E                  +DVL+ED+WLIAVNK
Sbjct: 12  SQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNK 71

Query: 224 PCGIYCEXXXXXXXXXXXXDQGSVIPEEQAK--LQELHLSNRLDRDTSGVTVVTKSHKVA 397
           P G+YCE                  P E A+    E HL+NRLDRDTSGV V+TKSHKVA
Sbjct: 72  PQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVA 131

Query: 398 AKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGS 577
           +KLVKAFTDH +KKTY+ALC+G  PKW+KI IKSGHGRSK G WRVYA SD G+TLPGGS
Sbjct: 132 SKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGS 191

Query: 578 FVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGR 751
            V+DMET FE+LSVNG+G    L   +                      +LVRA+P+SGR
Sbjct: 192 TVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGR 251

Query: 752 THQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLP 931
           THQIRLHCQYLGI IRGDVKY+GVYEW+ R Y+GHELHAE+LSFEHPVTG  V++ APLP
Sbjct: 252 THQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 311

Query: 932 LWA 940
            WA
Sbjct: 312 SWA 314


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
           gi|557088941|gb|ESQ29721.1| hypothetical protein
           EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score =  320 bits (821), Expect = 6e-85
 Identities = 156/255 (61%), Positives = 185/255 (72%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDT 358
           NDVL+EDEWL+AVNKP GIYCE                VI +  +   E HL+NRLDRDT
Sbjct: 84  NDVLYEDEWLMAVNKPKGIYCESVLSSAP--------KVIVDSSSTANEFHLANRLDRDT 135

Query: 359 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 538
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W KI ++SGHGRSKHGAWRVY
Sbjct: 136 SGVMLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVY 195

Query: 539 AISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXXXXXXXXXXX 718
           A  D GR LPGGSFVRDMET FEV+SVNG+     +E                       
Sbjct: 196 AALDVGRVLPGGSFVRDMETTFEVVSVNGE----KTEPLEVESVIVVEGEPGLSCVGDDV 251

Query: 719 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 898
           V+VRA+PRSGRTHQIRLHC+YLGIPIRGDVKY G+YEW+ R +EGHELHAESLSF+HPVT
Sbjct: 252 VVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPVT 311

Query: 899 GQSVLIHAPLPLWAS 943
           G+ ++I APLP W +
Sbjct: 312 GEPIVIRAPLPCWVA 326


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  320 bits (820), Expect = 7e-85
 Identities = 159/254 (62%), Positives = 182/254 (71%), Gaps = 2/254 (0%)
 Frame = +2

Query: 185 VLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSG 364
           V+FEDEW+IAVNKP GIYCE                ++ +  A + ELHL+NRLDRDTSG
Sbjct: 84  VIFEDEWIIAVNKPQGIYCESVLSSLP--------DLLNDTGANVSELHLANRLDRDTSG 135

Query: 365 VTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAI 544
           V ++TK HKVAAK VKAFTDH V+KTYLA CVG  PKW+KI +KSGHGRSK+GAWRVYA 
Sbjct: 136 VMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAA 195

Query: 545 SDAGRTLPGGSFVRDMETYFEVLSVNGKGC--SLGSEKNGXXXXXXXXXXXXXXXXXXXX 718
           SDAGR LPGGS V+DMET FEVLSVNG GC   +                          
Sbjct: 196 SDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKDEDVVIVQEKSVIGCDLKKDE 255

Query: 719 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 898
           +LVRA PRSGRTHQIRLHCQYLGIPIRGDV+Y+GVYEWK   Y+ HELHAESLSFEHP+T
Sbjct: 256 ILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPIT 315

Query: 899 GQSVLIHAPLPLWA 940
           G+ +L+ APLP WA
Sbjct: 316 GKPMLLQAPLPSWA 329


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  318 bits (815), Expect = 3e-84
 Identities = 168/313 (53%), Positives = 196/313 (62%), Gaps = 3/313 (0%)
 Frame = +2

Query: 23  TNSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 202
           T+SS   + N   T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 203 WLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 382
           WLIAVNKP GIYCE               + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 383 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 562
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 563 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 733
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 734 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 913
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 914 IHAPLPLWASEEL 952
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  318 bits (815), Expect = 3e-84
 Identities = 168/313 (53%), Positives = 196/313 (62%), Gaps = 3/313 (0%)
 Frame = +2

Query: 23  TNSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 202
           T+SS   + N   T  +Y            KN+E                  NDV++EDE
Sbjct: 40  TDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDE 99

Query: 203 WLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTK 382
           WLIAVNKP GIYCE               + I   +  L ELHL+NRLDRDTSGV V+TK
Sbjct: 100 WLIAVNKPQGIYCENVLAAVPRLLGDSANAGI---KTSLPELHLANRLDRDTSGVMVITK 156

Query: 383 SHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRT 562
           SHKVA+KLVKAFTDH V K+Y+A CVG+ PKW KI +KSGHGRSK G WRVYA +D GR+
Sbjct: 157 SHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRS 216

Query: 563 LPGGSFVRDMETYFEVLSVNGKGCSLGSEK---NGXXXXXXXXXXXXXXXXXXXXVLVRA 733
           LPGGS VRDMETYFEVLSVNGK      +K                         +L+RA
Sbjct: 217 LPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRA 276

Query: 734 YPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVL 913
            PRSGRTHQIRLHCQYLGIPIRGDVKY+GV EW +++Y+ HELHAESL F HPVTG  + 
Sbjct: 277 RPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLK 336

Query: 914 IHAPLPLWASEEL 952
           + APLP WAS+ L
Sbjct: 337 LQAPLPSWASQAL 349


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  317 bits (813), Expect = 5e-84
 Identities = 165/316 (52%), Positives = 198/316 (62%), Gaps = 8/316 (2%)
 Frame = +2

Query: 23  TNSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 202
           +N +   S+N+  T  +Y            K++E                  +DVL+EDE
Sbjct: 2   SNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDE 61

Query: 203 WLIAVNKPCGIYCEXXXXXXXXXXXXDQ-----GSVIPEEQAKLQELHLSNRLDRDTSGV 367
           WL+AVNKP G+YCE            D      G +    +  L ELHL+NRLDRDTSGV
Sbjct: 62  WLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGV 121

Query: 368 TVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAIS 547
            V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK GAWRVYA S
Sbjct: 122 MVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAAS 181

Query: 548 DAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXXXXXXX 718
           D GR LPGGS VRDM T FEVLSVNG+G        +++                     
Sbjct: 182 DVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNE 241

Query: 719 VLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVT 898
           +LVR +PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAESLS EHP+T
Sbjct: 242 ILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPIT 301

Query: 899 GQSVLIHAPLPLWASE 946
           G  V++ APLPLWA++
Sbjct: 302 GCPVMVQAPLPLWATQ 317


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
           gi|567881937|ref|XP_006433527.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535648|gb|ESR46766.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535649|gb|ESR46767.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  317 bits (812), Expect = 6e-84
 Identities = 160/266 (60%), Positives = 185/266 (69%), Gaps = 8/266 (3%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQ-----GSVIPEEQAKLQELHLSNR 343
           +DVL+EDEW +AVNKP G+YCE            D      G +    +  L ELHL+NR
Sbjct: 87  SDVLYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANR 146

Query: 344 LDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHG 523
           LDRDTSGV V+TKSHKVA+KLVKAFTDH V KTY+ALC+G  PKW +I I SGHGRSK G
Sbjct: 147 LDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFG 206

Query: 524 AWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXX 694
           AWRVYA SD GR LPGGS VRDM T FEVLSVNG+G        +++             
Sbjct: 207 AWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVL 266

Query: 695 XXXXXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAES 874
                   +LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEW  + Y+GHELHAES
Sbjct: 267 DADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAES 326

Query: 875 LSFEHPVTGQSVLIHAPLPLWASEEL 952
           LSF+HPVTG  V++ APLPLW +E L
Sbjct: 327 LSFDHPVTGCPVMVQAPLPLWGTEAL 352


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508719746|gb|EOY11643.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  316 bits (809), Expect = 1e-83
 Identities = 163/263 (61%), Positives = 186/263 (70%), Gaps = 5/263 (1%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGS--VIPEEQAKLQELHLSNRLDR 352
           +D+L+EDEWLIAVNKP GIYC+               S  +    QA   ELHL+NRLDR
Sbjct: 46  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 105

Query: 353 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 532
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 106 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 165

Query: 533 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 703
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 166 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 225

Query: 704 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 883
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 226 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 285

Query: 884 EHPVTGQSVLIHAPLPLWASEEL 952
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 286 QHPVTGFPVMIQAPLPLWASQAL 308


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508719745|gb|EOY11642.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  316 bits (809), Expect = 1e-83
 Identities = 163/263 (61%), Positives = 186/263 (70%), Gaps = 5/263 (1%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGS--VIPEEQAKLQELHLSNRLDR 352
           +D+L+EDEWLIAVNKP GIYC+               S  +    QA   ELHL+NRLDR
Sbjct: 78  SDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDR 137

Query: 353 DTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWR 532
           DTSG+ V+TKSHKVAA LVKAFT+HMV KTY+A C+GS PK ++I IKSGHGRSK GAWR
Sbjct: 138 DTSGIMVITKSHKVAAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWR 197

Query: 533 VYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGC---SLGSEKNGXXXXXXXXXXXXXXX 703
           VYA  D GR LPGGS VRDM T FEVLS+NG+        S K+                
Sbjct: 198 VYAAGDVGRKLPGGSIVRDMGTTFEVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVD 257

Query: 704 XXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSF 883
                +LVRA+PRSGRTHQIRLHCQYLGIPIRGDVKY+GVYEWK R Y+ HELHAESLSF
Sbjct: 258 AQKDEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSF 317

Query: 884 EHPVTGQSVLIHAPLPLWASEEL 952
           +HPVTG  V+I APLPLWAS+ L
Sbjct: 318 QHPVTGFPVMIQAPLPLWASQAL 340


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
           vesca]
          Length = 347

 Score =  313 bits (802), Expect = 9e-83
 Identities = 162/314 (51%), Positives = 194/314 (61%), Gaps = 6/314 (1%)
 Frame = +2

Query: 23  TNSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDE 202
           T S    S+N+     +Y            KN+E                  NDV++ED+
Sbjct: 35  TMSDQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQ 94

Query: 203 WLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEE--QAKLQELHLSNRLDRDTSGVTVV 376
           WLI VNKP GIYCE                ++ E   + K  E+HL+NRLDRDTSGV ++
Sbjct: 95  WLIVVNKPQGIYCETVLESVP--------KLLAESGLEGKAPEIHLANRLDRDTSGVMII 146

Query: 377 TKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAG 556
           TKSHKVAAKLVKAFTDH V KTY+A C+GS PKW++I +KSGHGRSK GAWRVYA SD G
Sbjct: 147 TKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVG 206

Query: 557 RTLPGGSFVRDMETYFEVLSVNGKGCSLGSEK----NGXXXXXXXXXXXXXXXXXXXXVL 724
           R LPGGS VRDMET FE+LS+NG+GC     +    +                     +L
Sbjct: 207 RPLPGGSVVRDMETSFEILSINGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEIL 266

Query: 725 VRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQ 904
           V A PRSGRTHQIRLHCQYLGI IRGDVKY+GVYEWK   Y GHELHAES+S +HP+TG 
Sbjct: 267 VIARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGL 326

Query: 905 SVLIHAPLPLWASE 946
            +L  APLP WA++
Sbjct: 327 PILFRAPLPSWANQ 340


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  310 bits (795), Expect = 6e-82
 Identities = 163/304 (53%), Positives = 191/304 (62%), Gaps = 3/304 (0%)
 Frame = +2

Query: 44  SENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 223
           S+N+  T  +Y            K+VE                  ND +FEDE L+AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 224 PCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 403
           P GIYCE                   E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 404 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 583
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 584 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 754
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 755 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 934
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLPM 311

Query: 935 WASE 946
           WAS+
Sbjct: 312 WASQ 315


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  310 bits (794), Expect = 8e-82
 Identities = 163/304 (53%), Positives = 191/304 (62%), Gaps = 3/304 (0%)
 Frame = +2

Query: 44  SENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEWLIAVNK 223
           S+N+  T  +Y            K+VE                  ND +FEDE L+AVNK
Sbjct: 12  SQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNK 71

Query: 224 PCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKSHKVAAK 403
           P GIYCE                   E +A   ELHL+NRLDRDTSG+ ++TKSHKVA+K
Sbjct: 72  PQGIYCESVFDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASK 131

Query: 404 LVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTLPGGSFV 583
           LVKAFT H V KTY+A CVGS PKW+ I IKSGHGRSK GAWRVYA SD GRTLPGGS V
Sbjct: 132 LVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVV 191

Query: 584 RDMETYFEVLSVNGKGCSLGS---EKNGXXXXXXXXXXXXXXXXXXXXVLVRAYPRSGRT 754
           RDMET FEVLSVNG+  S       K+G                    +LVRA P+SGR+
Sbjct: 192 RDMETSFEVLSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRS 251

Query: 755 HQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSVLIHAPLPL 934
           HQIRLHCQYLGI +RGDVKY+GV +WK + Y GHELHAESLSFEHP+T   V++  PLP+
Sbjct: 252 HQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPM 311

Query: 935 WASE 946
           WAS+
Sbjct: 312 WASQ 315


>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
          Length = 293

 Score =  307 bits (786), Expect = 6e-81
 Identities = 151/258 (58%), Positives = 179/258 (69%), Gaps = 3/258 (1%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDT 358
           +D+L+EDE+L+AVNKP G+YCE                          E HL+NRLDRDT
Sbjct: 46  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 94

Query: 359 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 538
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 95  SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 154

Query: 539 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 709
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 155 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 213

Query: 710 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 889
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 214 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 273

Query: 890 PVTGQSVLIHAPLPLWAS 943
           PVTG S++I APLP WA+
Sbjct: 274 PVTGDSIVIRAPLPYWAA 291


>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
           gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
           pseudouridine synthase 1; AltName: Full=RNA
           pseudouridylate synthase 1; AltName: Full=RNA-uridine
           isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
           [Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
           [Arabidopsis thaliana]
          Length = 322

 Score =  307 bits (786), Expect = 6e-81
 Identities = 151/258 (58%), Positives = 179/258 (69%), Gaps = 3/258 (1%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDT 358
           +D+L+EDE+L+AVNKP G+YCE                          E HL+NRLDRDT
Sbjct: 75  DDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS-----------EYHLANRLDRDT 123

Query: 359 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 538
           SGV ++TKSHKVAAKLVKAFT+H ++K+Y+ALC+GS P W ++ + SGHGRSKHGAWRVY
Sbjct: 124 SGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVY 183

Query: 539 AISDAGRTLPGGSFVRDMETYFEVLSVN---GKGCSLGSEKNGXXXXXXXXXXXXXXXXX 709
           A  D GR LPGGSFVRDMET FEV+SVN    + C L  + N                  
Sbjct: 184 AALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCEL-EDVNHVIVAEGERELSCGGDDD 242

Query: 710 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 889
              V+VRA+PRSGRTHQIRLHCQYLGIPIRGDVKY GVYEW  R +EGHELHAE LS +H
Sbjct: 243 DVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDH 302

Query: 890 PVTGQSVLIHAPLPLWAS 943
           PVTG S++I APLP WA+
Sbjct: 303 PVTGDSIVIRAPLPYWAA 320


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
           gi|355480262|gb|AES61465.1| Lon protease-like protein
           [Medicago truncatula]
          Length = 1262

 Score =  306 bits (783), Expect = 1e-80
 Identities = 161/316 (50%), Positives = 194/316 (61%), Gaps = 5/316 (1%)
 Frame = +2

Query: 26  NSSPVQSENSSPTLGHYXXXXXXXXXXXXKNVEXXXXXXXXXXXXXXXXXXNDVLFEDEW 205
           +S P  SEN+   L +Y            K +E                    +++EDE+
Sbjct: 2   SSPPHLSENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEY 61

Query: 206 LIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDTSGVTVVTKS 385
           L+AVNKP GIYC+               + +  +     ELHL+NRLDRDTSGV ++TKS
Sbjct: 62  LLAVNKPQGIYCDNVL------------TSLQSQSTVGSELHLANRLDRDTSGVMLITKS 109

Query: 386 HKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVYAISDAGRTL 565
           HK+A+KLVKAFTD  VKKTY+A C G VP W  I +KSGHGRSK GAWRVY  SD+GR L
Sbjct: 110 HKIASKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGL 169

Query: 566 PGGSFVRDMETYFEVLSVNGKG-----CSLGSEKNGXXXXXXXXXXXXXXXXXXXXVLVR 730
           PGGS VR+MET FE LSVNGKG       LG E+                      ++VR
Sbjct: 170 PGGSVVREMETSFEFLSVNGKGGFREVTELGFEEGN--VVVVEEKAVKMEGDDENEIVVR 227

Query: 731 AYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEHPVTGQSV 910
           AYPRSGRTHQIRLHCQYLGI I GDVKY+GVYEWK RVY+GH LHAE+LSF+HPVTG  V
Sbjct: 228 AYPRSGRTHQIRLHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRV 287

Query: 911 LIHAPLPLWASEELAK 958
           +  APLP WA++ L +
Sbjct: 288 MFRAPLPQWANQALLR 303



 Score =  101 bits (252), Expect = 5e-19
 Identities = 71/210 (33%), Positives = 97/210 (46%)
 Frame = +2

Query: 332  LSNRLDRDTSGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGR 511
            L + + R T  V ++ KSHKVA+KLVKAFTDH V+KTY++LC G  P W+ I ++S +GR
Sbjct: 927  LQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGR 985

Query: 512  SKHGAWRVYAISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSLGSEKNGXXXXXXXXXXX 691
            SK G  RVY             F+   E  FEV              +G           
Sbjct: 986  SKFGTRRVYV------------FLEVAELGFEV-------------SDG----------- 1009

Query: 692  XXXXXXXXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAE 871
                       V    ++ +   I+ HCQYLGI I GDVKY+G                 
Sbjct: 1010 -----------VVVEEKAVKMEGIQFHCQYLGISIIGDVKYEG----------------- 1041

Query: 872  SLSFEHPVTGQSVLIHAPLPLWASEELAKV 961
               F+H VTG  V++ A LP W ++ L+ +
Sbjct: 1042 ---FDHLVTGVRVMLCASLPQWVNQVLSNM 1068


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  303 bits (776), Expect = 9e-80
 Identities = 153/261 (58%), Positives = 178/261 (68%), Gaps = 3/261 (1%)
 Frame = +2

Query: 179 NDVLFEDEWLIAVNKPCGIYCEXXXXXXXXXXXXDQGSVIPEEQAKLQELHLSNRLDRDT 358
           +D+LFED+WL+AVNKP G+YCE              G          + LHL+NRLDRDT
Sbjct: 89  SDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDSDG------HDSCRSLHLANRLDRDT 142

Query: 359 SGVTVVTKSHKVAAKLVKAFTDHMVKKTYLALCVGSVPKWDKIIIKSGHGRSKHGAWRVY 538
           SGV V+TKSH+VAAKL+KAF+D  V KTYLALC+G+ P W+KI IKSGHGRSK GAWRVY
Sbjct: 143 SGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVY 202

Query: 539 AISDAGRTLPGGSFVRDMETYFEVLSVNGKGCSL---GSEKNGXXXXXXXXXXXXXXXXX 709
           A SD GR LP    ++DM T FEVLSVNG+G       S K                   
Sbjct: 203 AASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNAR 262

Query: 710 XXXVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYDGVYEWKDRVYEGHELHAESLSFEH 889
              +LVRA+PRSGRTHQIRLHCQYLGI IRGDVKY+GV+EWK ++Y+GHELHAESLSFEH
Sbjct: 263 QDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEH 322

Query: 890 PVTGQSVLIHAPLPLWASEEL 952
           PVTG  V   APLP WA + L
Sbjct: 323 PVTGVDVAFRAPLPSWAVQAL 343