BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00018140
         (1347 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus...   672   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               670   0.0  
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 669   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   639   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]             637   e-180
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr...   635   e-179
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   635   e-179
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...   634   e-179
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       634   e-179
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g...   634   e-179
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   634   e-179
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]                  633   e-179
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]                 630   e-178
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                  629   e-178
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   629   e-177
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                  627   e-177
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]               627   e-177
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   627   e-177
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                626   e-177
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]             623   e-176

>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
          Length = 883

 Score =  672 bits (1735), Expect = 0.0
 Identities = 338/470 (71%), Positives = 370/470 (78%), Gaps = 22/470 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKTVLLEKK-SAVVKKMTKPTP 177
            K+PKLS+ S+  K+K++S K E+K EDDED VP+SQR KK+   EKK S  +K   K   
Sbjct: 248  KKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKKSTTPEKKPSPALKTNNKTNS 306

Query: 178  AITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKG 357
                K NKK ++V K++ YS+SSK+PPSSG+GQKWTTLVHNGVIFPPPYKPHGVK+LYKG
Sbjct: 307  KTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKWTTLVHNGVIFPPPYKPHGVKMLYKG 366

Query: 358  KPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIY 537
            KPV LTPEQEEVATM+AVML+T+Y+ KP+FKENFM DW+KILGKNH+IQSLEHCDFTPIY
Sbjct: 367  KPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKKILGKNHVIQSLEHCDFTPIY 426

Query: 538  EWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGE 717
            EWH                            YMWAVLDGV+EKVGNFRVEPPGLFRGRGE
Sbjct: 427  EWHQREKEKKKQMSTDEKKALKEEKLKLEEKYMWAVLDGVREKVGNFRVEPPGLFRGRGE 486

Query: 718  HPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEF 897
            HPKMGKLK+RIRPSDITINIGRDAPIPECPI GE WKEIRHDNTVTWLAYW+DPIN KEF
Sbjct: 487  HPKMGKLKRRIRPSDITINIGRDAPIPECPIEGERWKEIRHDNTVTWLAYWSDPINGKEF 546

Query: 898  KYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDK 1077
            KYVFLAASS+LKGQSDKEKYEKARLLKDYIQGIR AYTRDF SKDP KKQIAVATYLIDK
Sbjct: 547  KYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFVSKDPAKKQIAVATYLIDK 606

Query: 1078 LALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFRA 1194
            LALRAGNEKDDDEADTVGCCT                                   VF+A
Sbjct: 607  LALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETAVFKA 666

Query: 1195 IQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDD 1344
            IQQFR+GKKGGDD+FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDD
Sbjct: 667  IQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDD 716


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  670 bits (1729), Expect = 0.0
 Identities = 339/472 (71%), Positives = 372/472 (78%), Gaps = 23/472 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEED-DEDHVPISQRMKKTVLLEKKSAVVK-KMTKPT 174
            K+PKLS+ S    NK++S KAE K +D D+DHVPISQRMKK+     KS+  K K+TK  
Sbjct: 257  KKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVV 316

Query: 175  PAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYK 354
             +  KK +KK +KV+K SKYS+SSKVPPSSGEG+KW TLVHNGVIFPPPYKPHGVK+LYK
Sbjct: 317  SSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYK 376

Query: 355  GKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPI 534
            GKPV LTPEQEEVATMFAVMLDT+YM K KFKENFMDDWRKILGKNH+IQ+LE CDFTPI
Sbjct: 377  GKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPI 436

Query: 535  YEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRG 714
            YEWH                            YMWA+++GVKEKVGNFRVEPP LFRGRG
Sbjct: 437  YEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRG 496

Query: 715  EHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKE 894
            EHPKMGKLKK IRPSDITINIG+DAPIPECPIPGESWKEIRHDNTVTWLA+WNDPI P+E
Sbjct: 497  EHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPRE 556

Query: 895  FKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLID 1074
            FKYVFLAASSSLKGQSDKEKYEKARLLKD+IQGIR AYT+DF SKD TK+QIAVATYLID
Sbjct: 557  FKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLID 616

Query: 1075 KLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFR 1191
            KLALRAGNEKDDDEADTVGCCT                                   V++
Sbjct: 617  KLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYK 676

Query: 1192 AIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            AIQQFRTGK+GGDD+FDKLDTSKLNAHLK LMPGLTAKVFRTYNASITLD+M
Sbjct: 677  AIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGLTAKVFRTYNASITLDEM 728


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  669 bits (1725), Expect = 0.0
 Identities = 331/471 (70%), Positives = 368/471 (78%), Gaps = 22/471 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIK-EEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTP 177
            K+PKLS  +     K++S K E K E+DD+DH+PISQR+KK+   E KS+ +KK TK   
Sbjct: 272  KKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVS 331

Query: 178  AITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKG 357
            +  KK NKK +KV+KNSKYS+SSKVPPSSGEG+KW  L HNGVIFPPPYKPHG+K+LYKG
Sbjct: 332  SSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKG 391

Query: 358  KPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIY 537
            KPV LTPEQEEVATMFAVMLDT+YM+KP+FKENF  DW+KILGKNH+IQ+LE+CDF+PIY
Sbjct: 392  KPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIY 451

Query: 538  EWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGE 717
            EWH                            YMWA +DG KEKVGNFRVEPPGLFRGRGE
Sbjct: 452  EWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGE 511

Query: 718  HPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEF 897
            HPKMGKLKKRIRP DITINIG+DAPIPECP+PGE WKE+RHDNTVTWLA+WNDPINPKEF
Sbjct: 512  HPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEF 571

Query: 898  KYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDK 1077
            KYVFLAASS+LKG SDKEKYEKARLLKDYIQGIR AYT+DF SKDPTKKQIAVATYLIDK
Sbjct: 572  KYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDK 631

Query: 1078 LALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFRA 1194
            LALRAGNEKDDDEADTVGCCT                                   VF+A
Sbjct: 632  LALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKA 691

Query: 1195 IQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            IQQFR+GK+G  D+FD LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 692  IQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 742


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  639 bits (1649), Expect = 0.0
 Identities = 324/496 (65%), Positives = 363/496 (73%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+K+LGKNH IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 445  DWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score =  637 bits (1644), Expect = e-180
 Identities = 323/496 (65%), Positives = 362/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDEDDDNVPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+K+LGKNH IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 445  DWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AI QFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|557555706|gb|ESR65720.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 824

 Score =  635 bits (1638), Expect = e-179
 Identities = 319/472 (67%), Positives = 362/472 (76%), Gaps = 23/472 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTP 177
            K+PK+S+TS   K K+ + K E K+ DD+DH+PISQRMK +    KKS     K TK   
Sbjct: 265  KKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVS 323

Query: 178  AITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYK 354
            + +KK NKK +KV+KNS+YS+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYK
Sbjct: 324  SSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYK 383

Query: 355  GKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPI 534
            GK V LTPEQEEVATMFAVMLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PI
Sbjct: 384  GKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPI 443

Query: 535  YEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRG 714
            Y+WH                            YMWA++DGVKEKVGNFRVEPPGLFRGRG
Sbjct: 444  YDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 503

Query: 715  EHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKE 894
            EHPKMGKLKKRI+PSDITINIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKE
Sbjct: 504  EHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKE 563

Query: 895  FKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLID 1074
            FKYVFLAASSSLKGQSD+EKYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLID
Sbjct: 564  FKYVFLAASSSLKGQSDREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLID 623

Query: 1075 KLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFR 1191
            KLALRAGNEKDDDEADTVGCCT                                   V++
Sbjct: 624  KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYK 683

Query: 1192 AIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            AI QF+TGKK  DD+FDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 684  AIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  635 bits (1638), Expect = e-179
 Identities = 319/472 (67%), Positives = 362/472 (76%), Gaps = 23/472 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTP 177
            K+PK+S+TS   K K+ + K E K+ DD+DH+PISQRMK +    KKS     K TK   
Sbjct: 265  KKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVS 323

Query: 178  AITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYK 354
            + +KK NKK +KV+KNS+YS+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYK
Sbjct: 324  SSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYK 383

Query: 355  GKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPI 534
            GK V LTPEQEEVATMFAVMLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PI
Sbjct: 384  GKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPI 443

Query: 535  YEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRG 714
            Y+WH                            YMWA++DGVKEKVGNFRVEPPGLFRGRG
Sbjct: 444  YDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 503

Query: 715  EHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKE 894
            EHPKMGKLKKRI+PSDITINIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKE
Sbjct: 504  EHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKE 563

Query: 895  FKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLID 1074
            FKYVFLAASSSLKGQSD+EKYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLID
Sbjct: 564  FKYVFLAASSSLKGQSDREKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLID 623

Query: 1075 KLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFR 1191
            KLALRAGNEKDDDEADTVGCCT                                   V++
Sbjct: 624  KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYK 683

Query: 1192 AIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            AI QF+TGKK  DD+FDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 684  AIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score =  634 bits (1636), Expect = e-179
 Identities = 319/472 (67%), Positives = 361/472 (76%), Gaps = 23/472 (4%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKTVLLEKKSAV-VKKMTKPTP 177
            K+PK+S+TS   K K+ + K E K+ DD+DH+PISQRMK +    KKS     K TK   
Sbjct: 265  KKPKVSDTSKEVKVKQVTVKVE-KKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVS 323

Query: 178  AITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKILYK 354
            + + K NKK +KV+KNS+YS+S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVK+LYK
Sbjct: 324  SSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYK 383

Query: 355  GKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPI 534
            GK V LTPEQEEVATMFAVMLDT+YM KPKF+ENF +DWRK+LGKNH+IQ+LE CDF PI
Sbjct: 384  GKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPI 443

Query: 535  YEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRG 714
            Y+WH                            YMWA++DGVKEKVGNFRVEPPGLFRGRG
Sbjct: 444  YDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRG 503

Query: 715  EHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKE 894
            EHPKMGKLKKRI+PSDITINIG+D PIPECPIPGESWKE++HDNTVTWLA+WNDPINPKE
Sbjct: 504  EHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKE 563

Query: 895  FKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLID 1074
            FKYVFLAASSSLKGQSDKEKYEKAR LKDYI  IR AYT+DF S+D T++QIAVATYLID
Sbjct: 564  FKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLID 623

Query: 1075 KLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXXXVFR 1191
            KLALRAGNEKDDDEADTVGCCT                                   V++
Sbjct: 624  KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYK 683

Query: 1192 AIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            AI QF+TGKK  DD+FDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD M
Sbjct: 684  AIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDGM 735


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  634 bits (1635), Expect = e-179
 Identities = 322/496 (64%), Positives = 361/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 264  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQSATSKPKDDDDDNVPISQ 323

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K S  VKK +    +  KK NK  +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 324  RIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQKWT 383

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP FKENF  
Sbjct: 384  TLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPCFKENFFS 443

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+KILGKNH+IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 444  DWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEKLQQEEKYMWAI 503

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE W
Sbjct: 504  VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGERW 563

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+ NTVTWLAYWNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 564  KEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAA 623

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 624  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 683

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 684  KFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 743

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 744  AKVFRTYNASITLDDM 759


>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
            topoisomerase I [Nicotiana tabacum]
          Length = 852

 Score =  634 bits (1635), Expect = e-179
 Identities = 319/458 (69%), Positives = 354/458 (77%), Gaps = 21/458 (4%)
 Frame = +1

Query: 31   LHKNKESSTKAEIKEEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPE 210
            L +  E+S K E K EDD+D VPISQR+KK+V    K +  KK TK   +     + K +
Sbjct: 257  LFRVSEASVKPEKKTEDDDDDVPISQRIKKSVASASKLSSAKKATKVVSS-----SMKTK 311

Query: 211  KVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEE 390
            K LK SKYS+SSK+ PSSGEGQKWTTLVHNGVIFPPPYKPHGVK+LYKGKPV LTPEQEE
Sbjct: 312  KKLKKSKYSKSSKLQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEE 371

Query: 391  VATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXX 570
            VATM+AVMLDT+YM K +FKENFM+DWRKILGKNH+IQ+L+ CDFTPIYE          
Sbjct: 372  VATMYAVMLDTDYMSKLQFKENFMNDWRKILGKNHVIQNLDDCDFTPIYERPSSEKEKKK 431

Query: 571  XXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 750
                                YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI
Sbjct: 432  QMSTKRKRPLREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI 491

Query: 751  RPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSL 930
            RP+DITINIG+ APIPECPIPGE WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSL
Sbjct: 492  RPNDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSL 551

Query: 931  KGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDD 1110
            KGQSDKEKYEKAR LKDYI+GIR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDD
Sbjct: 552  KGQSDKEKYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDD 611

Query: 1111 DEADTVGCCT---------------------XXXXXXXXXXXXXXVFRAIQQFRTGKKGG 1227
            DEADTVGCCT                                   VF+AIQ FR+GKKGG
Sbjct: 612  DEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYKPVFKAIQLFRSGKKGG 671

Query: 1228 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD 1341
            DD+FDKLDTSKLNAHLKELMPGLTAKVFRTYNAS+TL+
Sbjct: 672  DDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASVTLE 709


>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
            tuberosum]
          Length = 905

 Score =  634 bits (1634), Expect = e-179
 Identities = 312/451 (69%), Positives = 344/451 (76%), Gaps = 21/451 (4%)
 Frame = +1

Query: 52   STKAEIKEEDDEDHVPISQRMKKTVLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSK 231
            S K E K EDD+D VP+SQR+KK V     SA      K    +     KK +K LK  K
Sbjct: 287  SVKTEKKTEDDDDEVPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKLKKPK 346

Query: 232  YSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAV 411
            YS+SSK+ PSSG+GQKWTTL HNGVIFPPPYKPHGVK+LYKGKPV LTPEQEEVATM+AV
Sbjct: 347  YSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAV 406

Query: 412  MLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXX 591
            MLDTEY+ K +FKENFM+DWRKILGKNH+IQ LE C+FTPIYEWH               
Sbjct: 407  MLDTEYLTKQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEK 466

Query: 592  XXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITI 771
                         YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP+DITI
Sbjct: 467  KALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITI 526

Query: 772  NIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKE 951
            NIG+  P+PECPIPG+ WKE+RHDNTVTWLA+WNDPINP+EFKYVFLAASSSLKGQSDKE
Sbjct: 527  NIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKE 586

Query: 952  KYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVG 1131
            KYEKAR LKDYI+GIR AYT+DFTSKDP K+QIAVATYLIDKLALRAGNEKDDDEADTVG
Sbjct: 587  KYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVG 646

Query: 1132 CCT---------------------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKL 1248
            CCT                                   VF+AIQQFR+GKKGGDD+FDKL
Sbjct: 647  CCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKL 706

Query: 1249 DTSKLNAHLKELMPGLTAKVFRTYNASITLD 1341
            DTSKLNAHLKELMPGLTAKVFRTYNAS TL+
Sbjct: 707  DTSKLNAHLKELMPGLTAKVFRTYNASFTLE 737


>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
          Length = 926

 Score =  633 bits (1633), Expect = e-179
 Identities = 320/496 (64%), Positives = 362/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS T     NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSTITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEEVATMFA MLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+KILGKNH IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 445  DWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQLEEKYMWAI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDP+N KE KYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQ+AVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
          Length = 920

 Score =  630 bits (1624), Expect = e-178
 Identities = 320/496 (64%), Positives = 359/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+K+LGKNH IQ+LE CDF PIYEWH                            YMW +
Sbjct: 445  DWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEERLQQEEKYMWVI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDPIN KE KYVFL ASS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPINQKERKYVFLGASSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G  D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSADLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score =  629 bits (1622), Expect = e-178
 Identities = 319/496 (64%), Positives = 360/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGVIFPPPYKPHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVIFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAVMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+K+LGKNH IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 445  DWKKMLGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEEKKALKDERLQQEEKYMWAI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI P DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDP+N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLRVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
            gi|296082698|emb|CBI21703.3| unnamed protein product
            [Vitis vinifera]
          Length = 857

 Score =  629 bits (1621), Expect = e-177
 Identities = 323/476 (67%), Positives = 361/476 (75%), Gaps = 27/476 (5%)
 Frame = +1

Query: 1    KRPKLSETSIL-HKNKESSTKAEIK-EEDDEDHVPISQRMKKTVLLEKKSAVV--KKMTK 168
            K+PK+S  S    K   ++ KAE K E+DD+D +PISQRMKK+        V   +K+TK
Sbjct: 217  KKPKISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQRMKKSGASSGNKPVPAKQKVTK 276

Query: 169  PTPAITKKFNK--KPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVK 342
               + + K  K  K +K+ KNSKYS+S+KVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVK
Sbjct: 277  VVSSTSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVK 336

Query: 343  ILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCD 522
            +LYKGKPV LTPEQEEVATMFAVMLDT+YM K KFKENFM DWRKILGKNH+IQ L+ CD
Sbjct: 337  MLYKGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCD 396

Query: 523  FTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLF 702
            FTPIYEWH                            YMWA++DGVKEKVGNFRVEPPGLF
Sbjct: 397  FTPIYEWHQEEKEKKKQMSTEEKKTLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLF 456

Query: 703  RGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPI 882
            RGRGEHPKMGKLK+RI PSDITINIG+++ IPECPIPGESWKE++HDNTVTWLA+WNDPI
Sbjct: 457  RGRGEHPKMGKLKRRIHPSDITINIGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPI 516

Query: 883  NPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVAT 1062
            NPKEFKYVFLAASSSLKGQSDKEKYEKAR LK+YI+ IR  YT+DF SKD TK+QIAVAT
Sbjct: 517  NPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVAT 576

Query: 1063 YLIDKLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXX 1179
            YLIDKLALRAGNEKDDDEADTVGCCT                                  
Sbjct: 577  YLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVEL 636

Query: 1180 XVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
             V++AI+QFR GK G DD+FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD+M
Sbjct: 637  PVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEM 692


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score =  627 bits (1618), Expect = e-177
 Identities = 318/496 (64%), Positives = 359/496 (72%), Gaps = 47/496 (9%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT------------------- 123
            K+PKLS       NK+++ K E K EDD+D++P+SQR KK+                   
Sbjct: 265  KKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDEDDDNAPISQ 324

Query: 124  ------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWT 285
                    + K SA VKK +       KK NKK +KV+K + Y++SSKVPP SGEGQKWT
Sbjct: 325  RIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPPGSGEGQKWT 384

Query: 286  TLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMD 465
            TLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEEVATMFA MLDT+YM+KP+FKENF  
Sbjct: 385  TLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNKPRFKENFFS 444

Query: 466  DWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAV 645
            DW+KILGKNH IQ+LE CDF PIYEWH                            YMWA+
Sbjct: 445  DWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMTTEEKKALKDERLQLEEKYMWAI 504

Query: 646  LDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESW 825
            +DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRI P DITINIG+DAPIPECPIPGE W
Sbjct: 505  VDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIPGERW 564

Query: 826  KEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKA 1005
            KE+R+DNTVTWLAYWNDP+N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYI GIR A
Sbjct: 565  KEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHGIRAA 624

Query: 1006 YTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT-------------- 1140
            YT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT              
Sbjct: 625  YTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 684

Query: 1141 -------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLT 1299
                                 VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPGLT
Sbjct: 685  KIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPGLT 744

Query: 1300 AKVFRTYNASITLDDM 1347
            AKVFRTYNASITLDDM
Sbjct: 745  AKVFRTYNASITLDDM 760


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score =  627 bits (1616), Expect = e-177
 Identities = 312/460 (67%), Positives = 354/460 (76%), Gaps = 23/460 (5%)
 Frame = +1

Query: 37   KNKESSTKAEIKEEDDEDHVPISQRMKKT-VLLEKKSAVVKKMTKPTPAITKKFNKKPEK 213
            + K+S T A   +++D+DH PISQR+KK+ V + K SA VKK +       KK NKK +K
Sbjct: 301  RGKKSQTAASKPKDEDDDHAPISQRIKKSPVSVSKSSAPVKKASTVVSTSLKKVNKKSKK 360

Query: 214  VLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEV 393
            V++ + Y++SSKVPP SGEGQKWTTLVHNGV+FPPPYKPHGVK+LYK +P+ LTPEQEEV
Sbjct: 361  VIRKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEV 420

Query: 394  ATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXX 573
            ATMFAVMLDT+YM+KP+FKENF  DW+KILGKNH IQ+LE CDF PIYEWH         
Sbjct: 421  ATMFAVMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQ 480

Query: 574  XXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 753
                               YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLKKRIR
Sbjct: 481  MTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIR 540

Query: 754  PSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLK 933
            P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLAYWNDP+N KE KYVFLAASS+LK
Sbjct: 541  PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNIKECKYVFLAASSTLK 600

Query: 934  GQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDD 1110
            GQS KEKYEKAR+LKDYI GIR AYT+ FT +KDP KKQIAVATYLIDKLALRAGNEKDD
Sbjct: 601  GQSVKEKYEKARVLKDYIHGIRAAYTKGFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660

Query: 1111 DEADTVGCCT---------------------XXXXXXXXXXXXXXVFRAIQQFRTGKKGG 1227
            DEADTVGCCT                                   VF+AIQQFR+GK+G 
Sbjct: 661  DEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGS 720

Query: 1228 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
            +D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 721  EDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  627 bits (1616), Expect = e-177
 Identities = 315/476 (66%), Positives = 356/476 (74%), Gaps = 27/476 (5%)
 Frame = +1

Query: 1    KRPKLSETSILHKNKESSTKAEIKEEDDED------HVPISQRMKKTVLLEKKSAVVKKM 162
            K+PKL + S+  K K+ S KAE K++DD+D      + P  +R+KK+V  + K A   K+
Sbjct: 242  KKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSDNKKASKTKV 301

Query: 163  TKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVK 342
               +     K  KK +K+ K+SKYS+S+KVPP+SGEGQKWTTL HNGVIFPPPYKPHGVK
Sbjct: 302  IPSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVK 361

Query: 343  ILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCD 522
            +LY G+PV LTPEQEEVATMFAVM DT+Y  KP+F ENFM+DWR  LGKNH+I+  E CD
Sbjct: 362  MLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCD 421

Query: 523  FTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLF 702
            FTPIYEWH                            YMWAV+DGVKEKVGNFRVEPPGLF
Sbjct: 422  FTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVGNFRVEPPGLF 481

Query: 703  RGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPI 882
            RGRGEHPKMGKLKKRI PSDITINIG++AP+PECPIPGE WKE+RHDNTVTWLA+WNDPI
Sbjct: 482  RGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDNTVTWLAFWNDPI 541

Query: 883  NPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIRKAYTRDFTSKDPTKKQIAVAT 1062
            NPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQ IR  YT+DFT+KD  K+QIAVAT
Sbjct: 542  NPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTNKDTMKRQIAVAT 601

Query: 1063 YLIDKLALRAGNEKDDDEADTVGCCT---------------------XXXXXXXXXXXXX 1179
            YLIDKLALRAGNEKDDDEADTVGCCT                                  
Sbjct: 602  YLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSIRYFNTVEVEL 661

Query: 1180 XVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
             V++AI QF+TGK GGDD+FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLD+M
Sbjct: 662  PVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEM 717


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  626 bits (1615), Expect = e-177
 Identities = 321/498 (64%), Positives = 360/498 (72%), Gaps = 49/498 (9%)
 Frame = +1

Query: 1    KRPKLSE--TSILHKNKESSTKAEIKEEDDEDHVPISQRMKKT----------------- 123
            K+PKLS   TSI +K      + E K EDD+D++P+SQR KK+                 
Sbjct: 264  KKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGKKSQAATSKPKDEDDDNVPI 323

Query: 124  --------VLLEKKSAVVKKMTKPTPAITKKFNKKPEKVLKNSKYSESSKVPPSSGEGQK 279
                      + K SA VKK +       KK NK  +KV+K + Y++SSKVPP SGEGQK
Sbjct: 324  AQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIKKTAYTKSSKVPPGSGEGQK 383

Query: 280  WTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEVATMFAVMLDTEYMDKPKFKENF 459
            WTTLVHNGVIFPPPY PHGVK+LYK +P+ LTPEQEEVATMFAVMLDT+YM+KP+FKENF
Sbjct: 384  WTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNKPRFKENF 443

Query: 460  MDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMW 639
              DW+K+LGKNH IQ+LE CDF PIYEWH                            YMW
Sbjct: 444  FSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEDKLQQEEKYMW 503

Query: 640  AVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGRDAPIPECPIPGE 819
            A++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP DITINIG+DAPIPECPIPGE
Sbjct: 504  AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIPGE 563

Query: 820  SWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQGIR 999
             WKE+R+DNTVTWLA+W DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI GIR
Sbjct: 564  RWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHGIR 623

Query: 1000 KAYTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT------------ 1140
             AYT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT            
Sbjct: 624  AAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 683

Query: 1141 ---------XXXXXXXXXXXXXXVFRAIQQFRTGKKGGDDMFDKLDTSKLNAHLKELMPG 1293
                                   VF+AIQQFR+GK+G +D+FD+LDTSKLNAHLKELMPG
Sbjct: 684  ILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELMPG 743

Query: 1294 LTAKVFRTYNASITLDDM 1347
            LTAKVFRTYNASITLDDM
Sbjct: 744  LTAKVFRTYNASITLDDM 761


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score =  623 bits (1607), Expect = e-176
 Identities = 312/460 (67%), Positives = 352/460 (76%), Gaps = 23/460 (5%)
 Frame = +1

Query: 37   KNKESSTKAEIKEEDDEDHVPISQRMKKT-VLLEKKSAVVKKMTKPTPAITKKFNKKPEK 213
            + K+S T A   +++D+D+ PISQR+KK+   + K SA VKK +       KK NKK +K
Sbjct: 301  RGKKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKK 360

Query: 214  VLKNSKYSESSKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKILYKGKPVVLTPEQEEV 393
            V+K + Y++SSKVPP SGEGQKWTTLVHNGV+F PPYKPHGVK+LYK +P+ LTPEQEEV
Sbjct: 361  VIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEV 420

Query: 394  ATMFAVMLDTEYMDKPKFKENFMDDWRKILGKNHIIQSLEHCDFTPIYEWHXXXXXXXXX 573
            ATMFAVMLDT+YM KP+FKENF  DW+K+LGKNH +Q+LE CDF PIYEWH         
Sbjct: 421  ATMFAVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQ 480

Query: 574  XXXXXXXXXXXXXXXXXXXYMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 753
                               YMWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR
Sbjct: 481  MTTEEKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 540

Query: 754  PSDITINIGRDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSSLK 933
            P DITINIG+DAPIPECPIPGE WKE+R+DNTVTWLA+WNDPIN KE KYVFLAASS+LK
Sbjct: 541  PRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLK 600

Query: 934  GQSDKEKYEKARLLKDYIQGIRKAYTRDFT-SKDPTKKQIAVATYLIDKLALRAGNEKDD 1110
            GQSDKEKYEKARLLKDYI GIR AYT+DFT +KDP KKQIAVATYLIDKLALRAGNEKDD
Sbjct: 601  GQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDD 660

Query: 1111 DEADTVGCCT---------------------XXXXXXXXXXXXXXVFRAIQQFRTGKKGG 1227
            DEADTVGCCT                                   VF+AIQQFR+GK+G 
Sbjct: 661  DEADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGC 720

Query: 1228 DDMFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 1347
             D+FD+LDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM
Sbjct: 721  ADLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDM 760