BLASTX nr result
ID: Mentha23_contig00018139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00018139
(592 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 166 3e-39
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 166 6e-39
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 164 1e-38
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 163 4e-38
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 162 5e-38
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 157 2e-36
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 157 2e-36
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 155 8e-36
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 153 3e-35
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 153 3e-35
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 153 4e-35
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 152 5e-35
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 151 1e-34
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 150 2e-34
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 149 7e-34
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 148 1e-33
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 146 4e-33
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 145 1e-32
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 144 2e-32
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 144 2e-32
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 166 bits (421), Expect = 3e-39
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+ ++ ++ + F+ +GL VN K + G+ K+ IL++ GF EG LP KYLG+P+
Sbjct: 88 SVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPV 147
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
S+ L+ YSPL+ I+ + W+ +S AGRL+LV SV+ + YWL P P +V+
Sbjct: 148 TSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVL 207
Query: 363 DRITKILRKFLWNGNY-----CPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
+I I R FLW G + PVAW Q+C PR GGL + D+ WNKA K LWN+ +
Sbjct: 208 QKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSS 267
Query: 528 KSDSLWIQWVHGEYIR 575
K DSLW++W+ Y++
Sbjct: 268 KEDSLWVKWIQAYYVK 283
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 166 bits (419), Expect = 6e-39
Identities = 82/200 (41%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+ + L F SGL++N KS ++ G+RP E I L GF G P +YLG+PL
Sbjct: 40 SVSTMFAKLQHFCRVSGLSINSDKSAIYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPL 99
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
S L Y+PLL+ I + WS +S AG+LEL+R+V+QG+ +W++ PL +V+
Sbjct: 100 LSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVL 159
Query: 363 DRITKILRKFLW-----NGNYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
DRI FLW N +AW+ VC P+ EGGLGL +L WN S+ LW+ H
Sbjct: 160 DRINASCCNFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHC 219
Query: 528 KSDSLWIQWVHGEYIRDKTV 587
K D LW++WVH Y R V
Sbjct: 220 KKDFLWVRWVHHYYFRASDV 239
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 164 bits (416), Expect = 1e-38
Identities = 82/201 (40%), Positives = 122/201 (60%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S++++ + F + GL VN SK ++ G V K+ +L + GF EG +P +YLG+PL
Sbjct: 530 SVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPL 589
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
+S+ L Y L+ I+ + WS +S AGR++L++SV+ +W+Q LPLP VI
Sbjct: 590 SSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVI 649
Query: 363 DRITKILRKFLWNGN-----YCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
RI I R FLW GN P+AW +VC P+ GGL + +L+ WNK K LWN+
Sbjct: 650 MRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCN 709
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
KSD+LWI+W+H YIR +++W
Sbjct: 710 KSDNLWIKWLHTYYIRGQSIW 730
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 163 bits (412), Expect = 4e-38
Identities = 82/200 (41%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
Frame = +3
Query: 6 MEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPLA 185
M + L F SGL+++ KS ++ G+RP+E I L GF G P +YLG PL
Sbjct: 74 MSTMFAKLQHFCRVSGLSISSDKSAIYSAGIRPYELSHIQQLTGFSLGGFPFRYLGAPLL 133
Query: 186 SRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVID 365
S L Y+PLL I+ + W+ +S G+LEL+++V+QG+ +W++ PLP +V+D
Sbjct: 134 SSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLD 193
Query: 366 RITKILRKFLWN----GNYCP-VAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHAK 530
RI FLW+ G P VAW VC P+ EGGLGL +L WN A S LW+ H K
Sbjct: 194 RINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCK 253
Query: 531 SDSLWIQWVHGEYIRDKTVW 590
DSL ++WVH Y R W
Sbjct: 254 KDSLRVRWVHHYYFRRSDEW 273
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 162 bits (411), Expect = 5e-38
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S++++ K+ F+ ++GL +N +K VF GG+ Q+I + GF EG+LPV+YLG+PL
Sbjct: 191 SIKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPL 250
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
+ + L + Y PL+ I+ + WS+ +S AGR++LVRS++ + YW+ P+P VI
Sbjct: 251 SCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVI 310
Query: 363 DRITKILRKFLWNGN-----YCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
+I I R F+W+G+ VAW QVC P GGL L +L WN K LWNI +
Sbjct: 311 QKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICS 370
Query: 528 KSDSLWIQWVHGEYIRDKTV 587
K D+LW++W+H +++ V
Sbjct: 371 KEDNLWVKWIHAYFLKGDNV 390
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 157 bits (397), Expect = 2e-36
Identities = 85/201 (42%), Positives = 111/201 (55%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
SM + L F GL+++ KS ++ +R E I L GF G P +YLG+PL
Sbjct: 40 SMSTMFAKLQHFCRVLGLSISSDKSSIYSSSIRTHELSHIQQLTGFSLGGFPFRYLGVPL 99
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
S L Y+PLL+ I + WS +S AG+LEL+R+V+QG+ +W+ PLP +V+
Sbjct: 100 LSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWIGIFPLPQSVL 159
Query: 363 DRITKILRKFLWN----GNYCP-VAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
DRI R FLW G P VAW+ VC P+ EGGLGL +L WN A S LW+ H
Sbjct: 160 DRINASCRNFLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKDWNLALLSCILWDFHC 219
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
K DSL WVH Y R VW
Sbjct: 220 KKDSL---WVHHYYFRRSDVW 237
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 157 bits (397), Expect = 2e-36
Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S++ L+K EF+ SGL N +KS ++ GGV+ +Q I+ G+ LP KYLG+PL
Sbjct: 510 SIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPL 569
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
+S+ L + PL+ ++ ++ W+ +S AGR +LV++VL GV+ W Q +PA +I
Sbjct: 570 SSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKII 629
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I + R +LW+G +AW +VC P+ EGGLGL +L WN++ +K W++
Sbjct: 630 KLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLAN 689
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
K D LWI+W+H YI+ + W
Sbjct: 690 KEDKLWIKWIHAYYIKGQREW 710
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 155 bits (392), Expect = 8e-36
Identities = 69/200 (34%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E++ +++F+ T+GL VN +K ++ GGV K I + + EG LPV+YLG+PL
Sbjct: 530 SVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYLGVPL 589
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
S+ L Y PL+ I + W++ ++ GR+++V + + +W+Q LP+P +VI
Sbjct: 590 TSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVI 649
Query: 363 DRITKILRKFLWNGN-----YCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
+I + R F+W+ + P+AW VC P+ +GGL + +L WN LWN+
Sbjct: 650 KKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCK 709
Query: 528 KSDSLWIQWVHGEYIRDKTV 587
K D+LW++W+H YI++ +V
Sbjct: 710 KVDNLWVKWIHAHYIKNSSV 729
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 153 bits (387), Expect = 3e-35
Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+ + ++LD+F SGL VN+ KS ++L G+ E +GFP G+LP++YLGLPL
Sbjct: 711 SLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANA-AYGFPIGTLPIRYLGLPL 769
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
+R L +Y PLL I W N +S AGR++L+ SV+ G +W+ LP I
Sbjct: 770 MNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCI 829
Query: 363 DRITKILRKFLWNGNY-----CPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
RI + +FLW+GN V+W +CLP+ EGGLGLR L WNK + +W +
Sbjct: 830 KRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFV 889
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
DSLW W H ++ + W
Sbjct: 890 AKDSLWADWQHLHHLSRGSFW 910
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 153 bits (387), Expect = 3e-35
Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
Frame = +3
Query: 30 DEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPLASRSLTCND 209
++F S L ++ KS +F+ G+ P K IL F F G+LPVKYLGLPL ++ +T +D
Sbjct: 873 EKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSD 932
Query: 210 YSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVIDRITKILRK 389
Y PL+ I + W+N +S AGRL+L++SVL + +WL LP + I K+
Sbjct: 933 YLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSA 992
Query: 390 FLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHAKSDSLWIQW 554
FLW+G +AW++VC ++EGGLGL+ L N+ K +W I + DSLW++W
Sbjct: 993 FLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKW 1052
Query: 555 VHGEYIRDKTVW 590
V+ IR +T W
Sbjct: 1053 VNKHLIRKETFW 1064
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 153 bits (386), Expect = 4e-35
Identities = 84/201 (41%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E + + DEF SGL ++ KS +++ GV P KQ I F F G LPV+YLGLPL
Sbjct: 364 SIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPL 423
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ LT DYSPLL I + W+ S AGR L++SVL + +WL A LP I
Sbjct: 424 VTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCI 483
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I K+ FLW+G + ++W VC P+ EGGLGLR+L N K +W I +
Sbjct: 484 REIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIIS 543
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
S+SLW +WV IR K++W
Sbjct: 544 NSNSLWTKWVAEYLIRKKSIW 564
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 152 bits (385), Expect = 5e-35
Identities = 79/201 (39%), Positives = 110/201 (54%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+ L + F S L N S+S +FL GV +L + F G+ PV+YLG+PL
Sbjct: 539 SVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPL 598
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
+ L D SPLL I + W N +S AGRL+L++SVL ++ YW L LP V+
Sbjct: 599 ITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVL 658
Query: 363 DRITKILRKFLWNGN-----YCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I K LR FLW GN VAW+++CLP+ EGGLG++DL WNKA +WN+ +
Sbjct: 659 KDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVS 718
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
S + W WV ++ + W
Sbjct: 719 SSSNFWTDWVKVYLLKGNSFW 739
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 151 bits (381), Expect = 1e-34
Identities = 79/201 (39%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E + K DEF SGL ++ KS V+L G+ + + D F F G LPV+YLGLPL
Sbjct: 717 SIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPL 776
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ L+ D PLL + + W++ +S AGRL L+ SVL + +WL A LP I
Sbjct: 777 ITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCI 836
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
+ K+ FLW+G N ++W VC P+DEGGLGLR L N K +W I +
Sbjct: 837 RELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVS 896
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
S+SLW++WV +R+ + W
Sbjct: 897 HSNSLWVKWVDQHLLRNASFW 917
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 150 bits (380), Expect = 2e-34
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E + + + F SGL ++ KS V+ G+ Q ++ F F G+LPV+YLGLPL
Sbjct: 99 SIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPL 158
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ L+ DY PL+ I + WS +S AGRL L+ SVL + +W+ A LP I
Sbjct: 159 VTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECI 218
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I K+ +LW+G + +AWT VC P+DEGGLGLR L N K +W I +
Sbjct: 219 REIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIIS 278
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
+DSLW++W+H ++ + W
Sbjct: 279 HADSLWVKWIHATLLKQVSFW 299
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 149 bits (375), Expect = 7e-34
Identities = 77/178 (43%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Frame = +3
Query: 27 LDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPLASRSLTCN 206
L F SGL+++ KS ++ G+RP E I L GF G P +YLG+PL S L
Sbjct: 5 LQHFCRVSGLSISSDKSAIYSTGIRPHELSHIQQLTGFSLGDFPFRYLGVPLLSSRLNVC 64
Query: 207 DYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVIDRITKILR 386
Y+ LL+ I + WS +S AG+LEL+R+V+QG+ +W++ LP +V+D I R
Sbjct: 65 HYALLLSKITGLIQGWSKKSLSYAGKLELIRAVIQGIVNFWMEIFSLPQSVMDWINASCR 124
Query: 387 KFLWN----GNYCP-VAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHAKSDSLW 545
FLW G P VAW+ VC P+ EGGLGL +L WN A S+ LW+ H K DSLW
Sbjct: 125 NFLWGKADIGKNKPLVAWSVVCSPKKEGGLGLLNLKDWNLALLSRILWDFHCKKDSLW 182
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 148 bits (374), Expect = 1e-33
Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S++ + K L++F GL + K+ ++L GV +QL+ + F G LPV+YLGLPL
Sbjct: 438 SVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPL 497
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ LT +DYSPL+ I + W++ ++S AGRL L+ SVL + +W+ A LP I
Sbjct: 498 VTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECI 557
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
+ I +I LW+G V+W ++C P+ EGGLGL+ L NK K +W + +
Sbjct: 558 NEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLS 617
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
DSLW++W ++ ++ W
Sbjct: 618 CQDSLWVKWTRMNLLKKESFW 638
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 146 bits (369), Expect = 4e-33
Identities = 78/201 (38%), Positives = 110/201 (54%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S++ + + D F SGL ++ KS ++L GV I + + F G LPV+YLGLPL
Sbjct: 244 SIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPL 303
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ LT DYSPLL I + W+ ++S AGRL L+ SVL + +WL A LP I
Sbjct: 304 VTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECI 363
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I KI FLW+G V W VC P+ EGGLGLR L N+ K +W I +
Sbjct: 364 REIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVS 423
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
++SLW++W+ ++ T W
Sbjct: 424 HTNSLWVRWIEQYLLKHDTFW 444
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 145 bits (365), Expect = 1e-32
Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E + EF SGL ++ KS ++L GV ++ L F F G LPV+YLGLPL
Sbjct: 1014 SIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPL 1073
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ +T DYSPL+ + + W+ +S AGRL L+ SV+ + +W+ A LPA I
Sbjct: 1074 LTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCI 1133
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I K+ FLW+G +AW+ +C P+ EGGLG++ L+ NK K +W + +
Sbjct: 1134 REIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLS 1193
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
SLW+ W+ IR T W
Sbjct: 1194 TQPSLWVTWIWTFIIRKGTFW 1214
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 144 bits (363), Expect = 2e-32
Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+ +K L+ F SGL +N KS V+ G+ +K+ L FGF G+ P +YLGLPL
Sbjct: 710 SLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPFRYLGLPL 768
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
R L +DYS L+ I + W+ +S AGRL+L+ SV+ +WL + LP +
Sbjct: 769 LHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCL 828
Query: 363 DRITKILRKFLWNGNY-----CPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I ++ +FLW + V+W CLP+ EGGLGLR+ WNK + + +W + A
Sbjct: 829 KTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFA 888
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
+ DSLW+ W H +R W
Sbjct: 889 RRDSLWVAWNHANRLRHVNFW 909
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 144 bits (362), Expect = 2e-32
Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 5/201 (2%)
Frame = +3
Query: 3 SMEVLKKSLDEFTLTSGLTVNQSKSLVFLGGVRPFEKQLILDLFGFPEGSLPVKYLGLPL 182
S+E + EF SGL ++ KS ++L GV + IL F F G LPV+YLGLPL
Sbjct: 290 SVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPL 349
Query: 183 ASRSLTCNDYSPLLA*ILNFVHRWSNIHMSRAGRLELVRSVLQGVECYWLQALPLPATVI 362
++ +T DYSPLL + + + W+ +S AGRL L+ SV+ + +W+ A LPA I
Sbjct: 350 LTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCI 409
Query: 363 DRITKILRKFLWNG-----NYCPVAWTQVCLPRDEGGLGLRDLSAWNKAFHSKTLWNIHA 527
I K+ FLW+G + WT +C + EGGLG++ L NK K +W + +
Sbjct: 410 KEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVS 469
Query: 528 KSDSLWIQWVHGEYIRDKTVW 590
+ SLW+ WV IR + W
Sbjct: 470 RQSSLWVNWVWTYIIRKGSFW 490