BLASTX nr result

ID: Mentha23_contig00017298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00017298
         (588 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361283.1| PREDICTED: putative F-box/LRR-repeat protein...    64   3e-08
ref|XP_004244414.1| PREDICTED: F-box/LRR-repeat protein At3g0336...    63   7e-08
ref|XP_006358603.1| PREDICTED: probable F-box protein At1g60180-...    62   2e-07
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    58   2e-06
emb|CBI23316.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    57   3e-06
ref|XP_006361282.1| PREDICTED: putative F-box/LRR-repeat protein...    57   5e-06

>ref|XP_006361283.1| PREDICTED: putative F-box/LRR-repeat protein At3g28410-like
           [Solanum tuberosum]
          Length = 459

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
 Frame = +3

Query: 66  LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIGIV 239
           L ++L  + HVE L LS  CIE L  +++K   SP    KFL L+   D+ +   I   +
Sbjct: 280 LKELLHGVAHVENLELSTWCIECLSILELKGWQSPPSRRKFLELSVAEDQLDFPGICSFL 339

Query: 240 ELFPKLKTLVVD-------DMYCHADPKSKVTLK---PNPSDSFLVELKTVEV--TW-TR 380
           +    L+TLV+D       D+      K K T++    N + SF   LKTV++   W   
Sbjct: 340 QSSLDLETLVIDWFGDSPRDLLSRYTNKDKQTMRFETHNFNGSF-PHLKTVKIDNLWGLL 398

Query: 381 HNYLLVFPFVKILLKHVSKLEKLVFRMK--KTKPSNDMLLASEKLLRMPRSSPSAKLVF 551
                V P VK LLKH   LEK V       +    D    +++ L  PRSSP   +VF
Sbjct: 399 SENKFVLPLVKYLLKHAIVLEKFVIAASFLGSDAFPDHAEMTQEFLSFPRSSPHISVVF 457


>ref|XP_004244414.1| PREDICTED: F-box/LRR-repeat protein At3g03360-like [Solanum
           lycopersicum]
          Length = 451

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 11/173 (6%)
 Frame = +3

Query: 66  LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDK--YEIIIGIV 239
           L ++L  + HV+ L L   CIE L  ++++    P    KFL L+   D+  +  I   +
Sbjct: 281 LQELLRHVAHVKNLELGPWCIEYLSILELEGWQPPPSTWKFLQLSSELDQLTFPGISSFL 340

Query: 240 ELFPKLKTLVVDD-MYCHADPKSKVTLKPNPSDSFLVE-----LKTVEV-TWTRHNYLLV 398
           +    L+TLV+D   Y  +D   K T K   +  F        LKT+++  ++R     V
Sbjct: 341 QNSSDLETLVIDGYKYQSSDVLLKYTNKDEQTRRFETHYSFPYLKTIKILNFSRS----V 396

Query: 399 FPFVKILLKHVSKLEKLVF--RMKKTKPSNDMLLASEKLLRMPRSSPSAKLVF 551
            P VK LLKH + LEK +   R K+     D +   ++LL  P+SSP A + F
Sbjct: 397 MPLVKYLLKHATVLEKFIIAARRKEGDVFTDYVEIEQQLLTFPKSSPQASVSF 449


>ref|XP_006358603.1| PREDICTED: probable F-box protein At1g60180-like [Solanum
           tuberosum]
          Length = 302

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
 Frame = +3

Query: 66  LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIGIV 239
           L ++  ++ HVE L L   CI+ L  M+++    P    KFL L     + +   I   +
Sbjct: 130 LKKLFQSVAHVEKLELGPWCIQYLSIMELEGWQPPPSTWKFLQLRMNLKQLDFPGICCFL 189

Query: 240 ELFPKLKTLVVDDMYCHADPKSKVTLKPNPSDSF--------LVELKTVEV-TWTRHNYL 392
           +    L+TLV+D      D   K T K   +  F           LKT+++  ++R    
Sbjct: 190 QSSSDLETLVIDGYKKPRDLLLKYTNKDEQTRRFETHDFNCSFPHLKTIKILNFSR---- 245

Query: 393 LVFPFVKILLKHVSKLEK--LVFRMKKTKPSNDMLLASEKLLRMPRSSPSAKLVF 551
            + P VK LLKH + LEK  +V R K++  S D +   ++LL  PRSS    ++F
Sbjct: 246 FMMPLVKYLLKHATVLEKFIIVARRKRSDVSPDYVKMEQELLSFPRSSSQVSVIF 300


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
            vinifera]
          Length = 665

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
 Frame = +3

Query: 66   LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIGIV 239
            L +IL  + HVE L +   C+EVL  +++K+  SP    ++L LN    K+++  I  ++
Sbjct: 475  LREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLL 534

Query: 240  ELFPKLKTLVVD----------------DMYCHADPKSKVTLKPNPSDSF---LVELKTV 362
            +  P L+ L +D                + Y + D   + +   +   SF   L  LK +
Sbjct: 535  KSSPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGE-SFWESEEKSFKCLLQNLKII 593

Query: 363  EVTWTRHNYL---LVFPFVKILLKHVSKLEKLVFRMKKTKPSNDM----LLASEKLLRMP 521
            ++      Y        F++ LLK+   LEK+V  ++K K         L   +KLL   
Sbjct: 594  KIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSYAAQELPVVQKLLSFT 653

Query: 522  RSSPSAKLVF 551
            R+SP A ++F
Sbjct: 654  RASPRAAVLF 663


>emb|CBI23316.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 28/190 (14%)
 Frame = +3

Query: 66  LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIGIV 239
           L +IL  + HVE L +   C+EVL  +++K+  SP    ++L LN    K+++  I  ++
Sbjct: 2   LREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRYLILNTLPKKWDLPGIASLL 61

Query: 240 ELFPKLKTLVVD----------------DMYCHADPKSKVTLKPNPSDSF---LVELKTV 362
           +  P L+ L +D                + Y + D   + +   +   SF   L  LK +
Sbjct: 62  KSSPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGE-SFWESEEKSFKCLLQNLKII 120

Query: 363 EVTWTRHNYL---LVFPFVKILLKHVSKLEKLVFRMKKTKPSNDM----LLASEKLLRMP 521
           ++      Y        F++ LLK+   LEK+V  ++K K         L   +KLL   
Sbjct: 121 KIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSYAAQELPVVQKLLSFT 180

Query: 522 RSSPSAKLVF 551
           R+SP A ++F
Sbjct: 181 RASPRAAVLF 190


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
 Frame = +3

Query: 60  ETLSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIG 233
           + + ++L ++ HV+ L +   CI+VL   + K+  S   N+K L L+   +K+++  I  
Sbjct: 347 KVVMKLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIAN 406

Query: 234 IVELFPKLKTLVVD------------------DMYCHADPKSKVTLKPNPSDSFLVELKT 359
           +++    L+T V++                  D++ + D +   + +     + L+ LKT
Sbjct: 407 LLQSSTHLETFVINMISPCSQQISVEVGFSFTDLH-NFDEEKYWSSREGVLANSLINLKT 465

Query: 360 VE---VTWTRHNYLLVFPFVKILLKHVSKLEKLVFRMKKTKPSN---DMLLASEKLLRMP 521
           V+   V W +    LVF  VK LLK+   LEK+    K+   S      L +++ LL  P
Sbjct: 466 VKIIGVIWNQPGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRWSSLNSAQSLLSFP 525

Query: 522 RSSPSA 539
           R+SP+A
Sbjct: 526 RASPNA 531


>ref|XP_006361282.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
           [Solanum tuberosum]
          Length = 419

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
 Frame = +3

Query: 66  LSQILPAIQHVEGLALSQSCIEVLGAMKIKNSVSPFLNVKFLSLNCCFDKYEI--IIGIV 239
           ++++  ++ HVE L L   CI+ L  M+++    P    KFL L+    + +   I   +
Sbjct: 246 VNELFHSVAHVEKLELGHWCIKYLSIMELEGWQPPPSTWKFLQLSTKLKQLDFPGICCFL 305

Query: 240 ELFPKLKTLVVDDM-YCHADPKSKVTLKPNPSDSF--------LVELKTVEV-TWTRHNY 389
           +    L+TLV+D   +   D   K T K   +  F           LKT+++  ++R   
Sbjct: 306 QSSSDLETLVIDGYNFQSRDLLLKYTNKDEQTRRFETRDFNCSFPHLKTIKILNFSRS-- 363

Query: 390 LLVFPFVKILLKHVSKLEKLVF--RMKKTKPSNDMLLASEKLLRMPRSSPSAKLVF 551
             V P VK LLKH + LEK +   R K++    D +   ++LL  P+SSP   + F
Sbjct: 364 --VMPLVKYLLKHATVLEKFIIAARRKRSDVFPDYVKIEKELLTFPKSSPQVSVSF 417


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