BLASTX nr result
ID: Mentha23_contig00015775
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00015775
(1100 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 562 e-158
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 552 e-155
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 498 e-138
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 466 e-129
dbj|BAA22288.1| polyprotein [Oryza australiensis] 455 e-125
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 447 e-123
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 446 e-122
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 443 e-122
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 443 e-122
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 441 e-121
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 429 e-118
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 426 e-117
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 412 e-112
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 407 e-111
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 407 e-111
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera] 387 e-105
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 386 e-104
emb|CDF77009.1| hypothetical transposable element-related protei... 384 e-104
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 382 e-103
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 377 e-102
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 562 bits (1449), Expect = e-158
Identities = 278/366 (75%), Positives = 309/366 (84%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRILLSIA +YEIWQMDVKTAFLNG ++E IYM QPEGF A+ QEQK
Sbjct: 887 ETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQK 946
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL +SIYGLKQASRSWN+RFD IKSYGF+Q++DEPCVYKKI N V
Sbjct: 947 VCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDIL 1006
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GNDVE L++VK WL TQFQMKDLGEA YILGI+IVR+RK + LA+SQASYIDK++ RY
Sbjct: 1007 LIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRY 1066
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
+MQ+SKKG LP RHGI LSKEQCPKTPQE E+M IPY+SAVGSLMYAM CTRPDICY+V
Sbjct: 1067 KMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSV 1126
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGDKLQIDGYTDSDFQSDKDDRRSI 900
GIVSR+QSNPG DHW AVKNILKYLRRTRNYMLVY L + GYTDSDFQSDKD R+S
Sbjct: 1127 GIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKST 1186
Query: 901 SGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRP 1080
SGSVFTL GGA+VWRS+KQT ADSTMEAEY+AACEA+KEAVWL+ FLTDLE+VPNM P
Sbjct: 1187 SGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDLEVVPNMHLP 1246
Query: 1081 ITLYCD 1098
ITLYCD
Sbjct: 1247 ITLYCD 1252
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 552 bits (1423), Expect = e-155
Identities = 268/366 (73%), Positives = 310/366 (84%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
+TFSPV MLKSIRILLSI A DYEIWQMDVKT FLNG+++E IYM QPEGF K QEQK
Sbjct: 227 DTFSPVXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQK 286
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL RSIYGLKQASRSWN+ F+E IKSYGF+Q++ EPCVYK+I KV
Sbjct: 287 VCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDIL 346
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GNDVE LS+VK WLA+QFQMKDLGEASYILGI++ RDRK RLLALSQA+YIDK+++++
Sbjct: 347 LIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKF 406
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M++SKKG LP+RHG+ LSKEQCPKTPQ+EE M R+PYASAVGSLMYAM CTRPDIC+AV
Sbjct: 407 AMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLCTRPDICFAV 466
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGDKLQIDGYTDSDFQSDKDDRRSI 900
G+VSR+QSNPG+DHWVAVK+ILKYLRRTRNYMLVY G +L GYTDSDFQSD+D R+S
Sbjct: 467 GVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDSDFQSDRDSRKST 526
Query: 901 SGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRP 1080
S +VFTL GGAI+WRS+KQT ADSTMEAEY+AACEA+KEAVWL+ FL +LE+VPNM P
Sbjct: 527 SEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKELEVVPNMHEP 586
Query: 1081 ITLYCD 1098
I LYCD
Sbjct: 587 IRLYCD 592
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 498 bits (1283), Expect = e-138
Identities = 247/366 (67%), Positives = 294/366 (80%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRILLSIAA DYEIWQMDVKTAFLNG +DE IYM+Q EGF GQE
Sbjct: 192 ETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXNGQEHL 251
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL RSIYGLKQASRSWN FD+TIK++GFDQ DE CVYKK N KV
Sbjct: 252 LCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDIL 311
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GN + +L+ VK WL+ +F MKDLGEA++ILGI+++R+RKK+++ LSQA YID ++ R+
Sbjct: 312 LIGNCIGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRF 371
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQ SKKG+LP RHGI LSK+Q PKTP+E E+M +PYASAVGSLMYAM CTRPDIC+AV
Sbjct: 372 NMQGSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAV 431
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGDKLQIDGYTDSDFQSDKDDRRSI 900
G+VSRFQSN G +HW AVK+I+KYL+RTR+YMLV+ + L GYTDSDFQSD+D R+S
Sbjct: 432 GMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGYTDSDFQSDQDSRKST 491
Query: 901 SGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRP 1080
SG+VF L GGAI WRSIKQT ADSTMEAEY+AA EA+KEAVWL++FL DL +VP++ P
Sbjct: 492 SGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSP 551
Query: 1081 ITLYCD 1098
ITLYCD
Sbjct: 552 ITLYCD 557
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 466 bits (1200), Expect = e-129
Identities = 239/366 (65%), Positives = 281/366 (76%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRILLSIAA DYEIWQMDVKTAFLNG +DE IYM+Q EGF GQE
Sbjct: 870 ETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITNGQEHL 929
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL RSIYGLKQASRSWN FD+TIK++GFDQ D CVYKK N KV
Sbjct: 930 LCKLNRSIYGLKQASRSWNTCFDQTIKTFGFDQCHDVSCVYKKWNGKKVVFL-------- 981
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
+F MK LGEA++ILGI+++R+RKKR++ LSQA YID ++ R+
Sbjct: 982 ------------------RFDMKYLGEAAHILGIKLMRNRKKRMIGLSQALYIDTILNRF 1023
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQ SKKG+LP RHGIVLSK+Q PKTP+E E+M +PYASAVGSLMYAM CTRPDI +AV
Sbjct: 1024 NMQGSKKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDIYFAV 1083
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGDKLQIDGYTDSDFQSDKDDRRSI 900
G+VSRFQSNPG +HW AVK+I+KYL+RTR+YMLV+ + L GYTDSDFQSD+D R+S
Sbjct: 1084 GMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSRKST 1143
Query: 901 SGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRP 1080
SG+VF L GGAI WRSIKQT AD TMEAEY+AA EA+KEAVWL++FL DL +VP++ P
Sbjct: 1144 SGNVFVLGGGAISWRSIKQTCVADFTMEAEYVAASEAAKEAVWLRNFLLDLGVVPSVQSP 1203
Query: 1081 ITLYCD 1098
ITLYCD
Sbjct: 1204 ITLYCD 1209
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 455 bits (1170), Expect = e-125
Identities = 222/367 (60%), Positives = 275/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QP+GF K
Sbjct: 877 ETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGK 936
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIYGLKQASRSWN+RFDE IK +GF ++ +E CVYKK++ +
Sbjct: 937 ICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDIL 996
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+
Sbjct: 997 LIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 1056
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M DSKKG+LP HGI LSK QCP+T E MG +PYASA+GS+MYAM CTRPD+ YA+
Sbjct: 1057 NMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYAL 1116
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGDK-LQIDGYTDSDFQSDKDDRRS 897
SR+QS+PG HW AVKNILKYLRRT++ LVY G++ L + GYTD+ FQ+DKDD RS
Sbjct: 1117 SATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQTDKDDYRS 1176
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F+++L ++ +
Sbjct: 1177 QSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSELGVMTSTTG 1236
Query: 1078 PITLYCD 1098
P++LYCD
Sbjct: 1237 PMSLYCD 1243
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 447 bits (1151), Expect = e-123
Identities = 218/367 (59%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ET+SPVAMLKSIRILL+ AA DYEIWQMDVKTAFLNG ++E +YM QPEGF +K
Sbjct: 524 ETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARK 583
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL RSIYGLKQASRSWNLRF+E IK + F ++ +EPCVYKK + V
Sbjct: 584 VCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDIL 643
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK WL + F MKD+GEA+YILGIRI RDR +++ LSQ +YIDK++ R+
Sbjct: 644 LLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRF 703
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M DSKKG++P HGI LSK QCP T E E M +IPYASA+GS+MYAM TRPD+ A+
Sbjct: 704 NMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACAL 763
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
+ SR+QS+PG HW+ V+NI KYLRRT++ LVY G ++L + GYTD+ FQ+DKDD RS
Sbjct: 764 SMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRS 823
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG F L GGA+ W+S KQ++ ADST EAEYIAA EA+KE VW++ F+T+L +VP++
Sbjct: 824 QSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISG 883
Query: 1078 PITLYCD 1098
PI LYCD
Sbjct: 884 PIDLYCD 890
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 446 bits (1146), Expect = e-122
Identities = 221/367 (60%), Positives = 272/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVA +KSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF K
Sbjct: 860 ETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQPEGFVDAKYPNK 919
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL RSIYGLKQASRSWNL F E +K +GF +S DE CVY K + VT
Sbjct: 920 VCKLERSIYGLKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDIL 979
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ L +VK WL F MKDLGEA+YILGIRI+RDRKKRL+ LSQ +Y++K++ R+
Sbjct: 980 LMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLEKVLKRF 1039
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M++SKKG LP + LSK Q P T +E M R+PYASAVGS+MYAM CTRPD+ +A+
Sbjct: 1040 SMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFAL 1099
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
+VSR+Q NPG HW+AVKNILKYLRRT+N +LV G D L+++GYTD+ FQ+D+D RS
Sbjct: 1100 SMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGSDTLRVEGYTDASFQTDRDSGRS 1159
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + ADST E+EYIAA EASKEA WLK+F+ DL +VP++
Sbjct: 1160 QSGWVFLLNGGAVTWKSSKQETVADSTCESEYIAASEASKEAAWLKNFIGDLGVVPSIQE 1219
Query: 1078 PITLYCD 1098
P+ L+CD
Sbjct: 1220 PLELFCD 1226
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 443 bits (1139), Expect = e-122
Identities = 220/367 (59%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +K
Sbjct: 826 ETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKK 885
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+ +
Sbjct: 886 ICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 945
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+
Sbjct: 946 LIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 1005
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTR D+ YA+
Sbjct: 1006 NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYAL 1065
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVY-CGDKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++GYTD+ FQ+DKDD RS
Sbjct: 1066 SATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRS 1125
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F++ L ++ +
Sbjct: 1126 QSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASS 1185
Query: 1078 PITLYCD 1098
P+ LYCD
Sbjct: 1186 PMDLYCD 1192
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 443 bits (1139), Expect = e-122
Identities = 220/367 (59%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +K
Sbjct: 739 ETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKK 798
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIY LKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+ +
Sbjct: 799 ICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDIL 858
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+
Sbjct: 859 LIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 918
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTR D+ YA+
Sbjct: 919 NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYAL 978
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVY-CGDKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+ G HW+AVKNILKYLRRT++ LVY ++L ++GYTD+ FQ+DKDD RS
Sbjct: 979 SATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKDDFRS 1038
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + ADST EAEYIAA EA+KEAVW+K F++ L ++ +
Sbjct: 1039 QSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSQLGVMTSASS 1098
Query: 1078 PITLYCD 1098
P+ LYCD
Sbjct: 1099 PMDLYCD 1105
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 441 bits (1135), Expect = e-121
Identities = 215/367 (58%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFS VAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF K
Sbjct: 873 ETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPNNASK 932
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL +SIYGLKQASRSWN+RFDE IK +GF ++ +EPCVY K++ +
Sbjct: 933 VCKLQKSIYGLKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDIL 992
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGI+I RDR +RL+ LSQ++YIDK+++R+
Sbjct: 993 LIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRF 1052
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQ++KKG+LP HGI SK Q P T E + M IPYASA+GS+MYAM CTR D+ YA+
Sbjct: 1053 NMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYAL 1112
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCGD-KLQIDGYTDSDFQSDKDDRRS 897
+ SR+Q++PG HW AVKNILKYLRRT++ L+Y GD +L ++GYTD+ FQ+DKDD RS
Sbjct: 1113 SVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQTDKDDYRS 1172
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + ADST +AEYIAA EA+KE VW+++F+ +L +VP+
Sbjct: 1173 QSGFVFILNGGAVSWKSSKQETVADSTTKAEYIAASEAAKEGVWIRNFIAELGVVPSASS 1232
Query: 1078 PITLYCD 1098
P+ LYCD
Sbjct: 1233 PMDLYCD 1239
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 429 bits (1104), Expect = e-118
Identities = 215/367 (58%), Positives = 265/367 (72%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPVAMLK I I+L+IAA DYEIWQM VKTAFLNG +DE +YM QP+GF +K
Sbjct: 748 ETFSPVAMLKFIWIVLAIAAYFDYEIWQMYVKTAFLNGNLDEDVYMTQPKGFDDPQSAKK 807
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ +EPCVYKKI+ +
Sbjct: 808 ICKLHQSIYGLKQASRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDIL 867
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+
Sbjct: 868 LIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 927
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CTRPD+ YA+
Sbjct: 928 NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYAL 987
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+PG HW+AVKNILKYLRRT++ L Y G ++L ++GYTD+ FQ DKDD RS
Sbjct: 988 SATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVVNGYTDASFQIDKDDFRS 1047
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ DST EAEYIAA EAVW+K F++ L ++ +
Sbjct: 1048 QSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIAA----SEAVWIKKFVSQLGVMTSASS 1103
Query: 1078 PITLYCD 1098
+ LYCD
Sbjct: 1104 SMDLYCD 1110
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 426 bits (1095), Expect = e-117
Identities = 207/351 (58%), Positives = 258/351 (73%), Gaps = 1/351 (0%)
Frame = +1
Query: 49 SIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASR 228
+IAA DYEIWQMDVKTAFLNG + E +YM QPEGF KVCKL +SIYGLKQASR
Sbjct: 473 AIAAYFDYEIWQMDVKTAFLNGNLHEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASR 532
Query: 229 SWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWL 408
SWN+RFDE IK +GF ++ +EPCVY K++ + GND+ +L VK L
Sbjct: 533 SWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSL 592
Query: 409 ATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGI 588
F MKDLG+A+YILGIRI RDR KRL+ LSQ YIDK++ R+ MQ+SK+G+LP HGI
Sbjct: 593 RKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGI 652
Query: 589 VLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVSRFQSNPGMDHWV 768
LSK QCP T E + M IPYASA+GS+MYAM CTRPD+ YA+ + SR+Q++P HW
Sbjct: 653 NLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWT 712
Query: 769 AVKNILKYLRRTRNYMLVYCGD-KLQIDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWR 945
AVKNILKYLRRT++ LVY GD +L ++GYTD+ FQ+DKDD RS SG VF L GGA+ W+
Sbjct: 713 AVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWK 772
Query: 946 SIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDRPITLYCD 1098
S KQ + ADST EAEYIAA EA+KE VW+++F+T+L +VP+ P+ LYCD
Sbjct: 773 SSKQETVADSTTEAEYIAASEAAKEGVWIRNFITELGMVPSASSPMDLYCD 823
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 412 bits (1059), Expect = e-112
Identities = 208/367 (56%), Positives = 260/367 (70%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFS VAMLKSI+I+L+I A DYEIWQMDVKTAF+NG IDE +YM Q +GF +K
Sbjct: 625 ETFSLVAMLKSIQIVLAITAYFDYEIWQMDVKTAFVNGNIDEDVYMTQLKGFVDPQSAKK 684
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIYGLKQASRSWN+RFDE +K++ ++ +Y
Sbjct: 685 ICKLQKSIYGLKQASRSWNIRFDEVVKAWALSKTKKSLVLY--------------VDDIL 730
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L VK L F MKDLGEA+YILGIRI RDR KRL+ LSQ++YIDK++ R+
Sbjct: 731 LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 790
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L K QCP+T E M IPYASA+GS+MYAM CT PD+ YA+
Sbjct: 791 NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYAL 850
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+PG HW+AVKNILKYLRRT++ LVY G ++L + GYTD+ FQ+DKDD RS
Sbjct: 851 SATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVKGYTDASFQTDKDDFRS 910
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGA+ W+S KQ + DS EAEYIAA EA+KEAVW+K F++ L ++ +
Sbjct: 911 QSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAASEAAKEAVWIKKFVSQLGVMTSASS 970
Query: 1078 PITLYCD 1098
P+ LYCD
Sbjct: 971 PMDLYCD 977
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 407 bits (1046), Expect = e-111
Identities = 203/343 (59%), Positives = 254/343 (74%), Gaps = 1/343 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETF PVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +K
Sbjct: 800 ETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKK 859
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ + PCVYKKI+ +
Sbjct: 860 ICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDIL 919
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L V L F MKDLGEA+YILGIRI RD KRL+ LS+++YIDK++ +
Sbjct: 920 LIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMF 979
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L+K QC +T E+ M IPYASA+GS+MYAM CTRPD+ Y +
Sbjct: 980 NMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVL 1039
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+P HW+AVKNILKYLRRT++ LVY G ++L ++GYTD+ FQ+DKDD RS
Sbjct: 1040 SATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRS 1099
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAV 1026
SG VF L G A+ W+S KQ + A+ST EAEYIAA +A+KEAV
Sbjct: 1100 QSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1142
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 407 bits (1046), Expect = e-111
Identities = 203/343 (59%), Positives = 254/343 (74%), Gaps = 1/343 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETF PVAMLKSIRI+L+IAA DYEIWQMDVKTAFLNG +DE +YM QP+GF +K
Sbjct: 742 ETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKK 801
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
+CKL +SIYGLKQASRSWN+RFDE +K+ GF ++ + PCVYKKI+ +
Sbjct: 802 ICKLQKSIYGLKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDIL 861
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
GND+ +L V L F MKDLGEA+YILGIRI RD KRL+ LS+++YIDK++ +
Sbjct: 862 LIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYIDKVLKMF 921
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQDSKKG+LP HGI L+K QC +T E+ M IPYASA+GS+MYAM CTRPD+ Y +
Sbjct: 922 NMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVL 981
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
SR+QS+P HW+AVKNILKYLRRT++ LVY G ++L ++GYTD+ FQ+DKDD RS
Sbjct: 982 SATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQTDKDDFRS 1041
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAV 1026
SG VF L G A+ W+S KQ + A+ST EAEYIAA +A+KEAV
Sbjct: 1042 QSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIAASKAAKEAV 1084
>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
Length = 1356
Score = 387 bits (993), Expect = e-105
Identities = 188/367 (51%), Positives = 252/367 (68%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IYM QPE F ++ +
Sbjct: 913 ETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPENFVSEDSKNM 972
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL +SIYGLKQASR W +F + I SYGF+ ++ + CVY K + K
Sbjct: 973 VCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDIL 1032
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
ND+ +L + K +L+ F+MKDLG+AS++LGI+I RDR + +L LSQ +YIDK++ RY
Sbjct: 1033 LATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRY 1092
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQ+SK G P G S QCPK E + M +IPYASAVGSLMYA CTRPDI Y V
Sbjct: 1093 GMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIV 1152
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
G++ R+ SNPGMDHW A K +++YL+RT+ YML Y D+L++ GY+DSDF +D RRS
Sbjct: 1153 GMLGRYLSNPGMDHWKAAKRVMRYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDSRRS 1212
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG ++ L GGAI WRS KQT STMEAE++A EAS + +WL++F+T L ++ ++R
Sbjct: 1213 TSGYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDGIER 1272
Query: 1078 PITLYCD 1098
P+ ++CD
Sbjct: 1273 PLKIFCD 1279
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 386 bits (991), Expect = e-104
Identities = 188/367 (51%), Positives = 252/367 (68%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IYM QPE F ++ +
Sbjct: 807 ETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMVQPENFVSEDSKNM 866
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL +SIYGLKQASR W +F + I SYGF+ ++ + CVY K + K
Sbjct: 867 VCKLTKSIYGLKQASRQWYFKFHQIIVSYGFEANLMDECVYHKFSGSKYIFLVLYVDDIL 926
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
ND+ +L + K +L+ F+MKDLG+AS++LGI+I RDR + +L LSQ +YIDK++ RY
Sbjct: 927 LATNDIXILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRY 986
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
MQ+SK G P G S QCPK E + M +IPYASAVGSLMYA CTRPDI Y V
Sbjct: 987 GMQNSKPGDTPVAKGDKFSLNQCPKNXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIV 1046
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRS 897
G++ R+ SNPGMDHW A K +++YL+RT+ YML Y D+L++ GY+DSDF +D RRS
Sbjct: 1047 GMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLDQLELIGYSDSDFAGCQDSRRS 1106
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG ++ L GGAI WRS KQT STMEAE++A EAS + +WL++F+T L ++ ++R
Sbjct: 1107 TSGYIYLLAGGAISWRSAKQTLVTSSTMEAEFVACYEASNQGIWLRNFVTGLRVLDGIER 1166
Query: 1078 PITLYCD 1098
P+ ++CD
Sbjct: 1167 PLKIFCD 1173
>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
divaricarpa]
Length = 1350
Score = 384 bits (986), Expect = e-104
Identities = 189/367 (51%), Positives = 254/367 (69%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPV+ +S R ++++ A D E+ QMDVKTAFLNG IDE IYM+QPE F + ++
Sbjct: 910 ETFSPVSSKESFRTIMALVAHYDLELHQMDVKTAFLNGDIDETIYMEQPENFVSHDSKKM 969
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VCKL +SIYGLKQASR W +F + I S+GF+ ++ E CVY+K + K+
Sbjct: 970 VCKLNKSIYGLKQASRQWYHKFHKVIISFGFEVNLVEDCVYQKFSGSKLIFLVLYVDDIL 1029
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
ND+ +L E+K +L F+MKDLGEAS++LGI+I+RDR + +L LSQ +YIDK++ R+
Sbjct: 1030 LATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGILRLSQKNYIDKVLKRF 1089
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M D K G P G QCPK E + M +IPYASAVGSLMYA CTRPDI Y V
Sbjct: 1090 GMHDCKPGDTPVAKGDKFCLSQCPKENLEIQEMQKIPYASAVGSLMYAQVCTRPDIAYIV 1149
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVY-CGDKLQIDGYTDSDFQSDKDDRRS 897
G++ R+ SNPG+DHW A K +++YL+RT++YML Y D L+I GY+DSDF +D R+S
Sbjct: 1150 GVLGRYLSNPGLDHWKAAKRVMRYLQRTKDYMLTYQRSDNLEIIGYSDSDFAGCQDSRKS 1209
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG VF L GGAI WRS KQ+ A STM AE++A EAS + +WLK+F+T L+I+ ++R
Sbjct: 1210 TSGYVFLLAGGAISWRSAKQSLVASSTMAAEFVAVFEASNQGLWLKNFVTRLQILEGIER 1269
Query: 1078 PITLYCD 1098
P+ +YCD
Sbjct: 1270 PLKIYCD 1276
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 382 bits (981), Expect = e-103
Identities = 188/319 (58%), Positives = 234/319 (73%), Gaps = 1/319 (0%)
Frame = +1
Query: 73 EIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQKVCKLLRSIYGLKQASRSWNLRFDE 252
+IWQMDVKTAFLNG +DE +YM QP+GF +K+CKL +SIYGLKQASRSWN+ FDE
Sbjct: 620 KIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIHFDE 679
Query: 253 TIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXXXXGNDVEVLSEVKGWLATQFQMKD 432
+K+ GF ++ EPCVYKKI+ + ND+ +L VK L F MKD
Sbjct: 680 IVKALGFVKNEQEPCVYKKISGSALVFLILYVDDILLIENDIPMLESVKTSLKNSFSMKD 739
Query: 433 LGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRYRMQDSKKGYLPTRHGIVLSKEQCP 612
LGEA+YILGIRI +DR KRL+ LSQ++YIDK++ R+ MQDSKKG+LP HGI L K QCP
Sbjct: 740 LGEAAYILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCP 799
Query: 613 KTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAVGIVSRFQSNPGMDHWVAVKNILKY 792
+T E M IPYASA+GS+MYAM CTRPD+ YA+ S++QS+PG HW+A+KNILKY
Sbjct: 800 QTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKY 859
Query: 793 LRRTRNYMLVYCG-DKLQIDGYTDSDFQSDKDDRRSISGSVFTLCGGAIVWRSIKQTSTA 969
LRRT++ LVY G ++L ++GYTD+ FQ DKDD RS SG VF L GGA+ W+S KQ + A
Sbjct: 860 LRRTKDMFLVYGGQEELVVNGYTDASFQIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVA 919
Query: 970 DSTMEAEYIAACEASKEAV 1026
DST EAEYIAA EA+KE V
Sbjct: 920 DSTTEAEYIAASEAAKEVV 938
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 377 bits (969), Expect = e-102
Identities = 187/367 (50%), Positives = 248/367 (67%), Gaps = 1/367 (0%)
Frame = +1
Query: 1 ETFSPVAMLKSIRILLSIAACLDYEIWQMDVKTAFLNGYIDEPIYMQQPEGFHAKGQEQK 180
ETFSPV+ S RI++++ A D E+ QMDVKTAFLNG IDE IYM QPE F +K +Q
Sbjct: 738 ETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESKDSKQL 797
Query: 181 VCKLLRSIYGLKQASRSWNLRFDETIKSYGFDQSIDEPCVYKKINNGKVTXXXXXXXXXX 360
VC+L RSIYGLKQASR W +FD+ I S+GF ++ + C+Y K + K
Sbjct: 798 VCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKFSGSKFIILVLYVDDIL 857
Query: 361 XXGNDVEVLSEVKGWLATQFQMKDLGEASYILGIRIVRDRKKRLLALSQASYIDKMMLRY 540
+DV +L E K +L+++F MKDLG AS++LGI+I RDR + +L LSQ +YIDK++ R+
Sbjct: 858 LASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 917
Query: 541 RMQDSKKGYLPTRHGIVLSKEQCPKTPQEEENMGRIPYASAVGSLMYAMRCTRPDICYAV 720
M + G P G S QCPK E+++M R PYASAVGSLMYA CTRPDI Y V
Sbjct: 918 GMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIV 977
Query: 721 GIVSRFQSNPGMDHWVAVKNILKYLRRTRNYMLVY-CGDKLQIDGYTDSDFQSDKDDRRS 897
G++ R+ SNPGMDHW K +++YL+RT++YML Y L+I GY+DSDF D RRS
Sbjct: 978 GMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSHLEIVGYSDSDFAGCLDSRRS 1037
Query: 898 ISGSVFTLCGGAIVWRSIKQTSTADSTMEAEYIAACEASKEAVWLKSFLTDLEIVPNMDR 1077
SG +F L GGA+ W+S+KQT A STMEAE+IA EAS +WL++F+T L IV +++
Sbjct: 1038 TSGYIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNFVTQLXIVDGIEK 1097
Query: 1078 PITLYCD 1098
P+ + CD
Sbjct: 1098 PLRINCD 1104