BLASTX nr result
ID: Mentha23_contig00015448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00015448
(877 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus... 405 e-110
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 390 e-106
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 301 3e-79
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 299 8e-79
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 284 3e-74
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 276 6e-72
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 276 8e-72
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 263 7e-68
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 250 4e-64
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 242 2e-61
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 239 1e-60
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 239 1e-60
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 235 2e-59
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 235 2e-59
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 234 3e-59
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 234 4e-59
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi... 232 2e-58
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 230 6e-58
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 230 6e-58
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 230 6e-58
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
Length = 1379
Score = 405 bits (1041), Expect = e-110
Identities = 206/293 (70%), Positives = 234/293 (79%), Gaps = 1/293 (0%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+SA+VVGTVNEVSDAALGLPT +EC +CGAK RDCEGHFG+I FPFTILNPY+MSEV
Sbjct: 32 MSAIVVGTVNEVSDAALGLPTQYATECATCGAKNSRDCEGHFGLIKFPFTILNPYYMSEV 91
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSH-QSRSCRYCNGKPKDGYPKMKFKVSSKDVFAK 520
+QILNKICPGCK+ RH K K+ S S+H QSR+CRYC+GK KDGYPKM F+VSSKDVFAK
Sbjct: 92 SQILNKICPGCKTFRHSKTKNADSSSAHNQSRNCRYCSGKSKDGYPKMTFRVSSKDVFAK 151
Query: 519 SAIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCP 340
SAIIAEV E V+KCS G LA DYWDV+PKDSA E++ LP N+RVLLPAQVY+ILKDVCP
Sbjct: 152 SAIIAEVKEILVNKCSSGNLAYDYWDVIPKDSAVEHAVLPPNRRVLLPAQVYNILKDVCP 211
Query: 339 KTLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARV 160
TL+ KRKNSIFLNSLLVTPNSHRVREFGQRIT+DE T+MYRKL+DFRGSPNEL+AR
Sbjct: 212 TTLQGLLKRKNSIFLNSLLVTPNSHRVREFGQRITIDELTRMYRKLVDFRGSPNELTAR- 270
Query: 159 LERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
S NDSASS+S LKNIK+L+L KRTD+ FR
Sbjct: 271 ------------------------SLNDSASSSSALKNIKELVLAKRTDNCFR 299
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 390 bits (1001), Expect = e-106
Identities = 197/292 (67%), Positives = 241/292 (82%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
ISA+VV VNEVSDA+LGLP++N EC +CGA ++CEGHFGVINF +TILNPY+M E+
Sbjct: 2 ISAIVVSNVNEVSDASLGLPSINARECLTCGANSAKECEGHFGVINFNYTILNPYYMPEI 61
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A ILNKICPGCKS+R KIK S S ++C+YCN GYPKMKF+VS+++VFAK+
Sbjct: 62 ANILNKICPGCKSIRQRKIKKGDSASQ---QNCKYCNVTSL-GYPKMKFRVSTREVFAKT 117
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AIIAEV E +V++ LASDYWD++PKDS Q+ S +P+N+RVL P+QVY ILKDVCPK
Sbjct: 118 AIIAEVQEMAVNQHHCIGLASDYWDIIPKDSPQDQSDIPSNRRVLYPSQVYSILKDVCPK 177
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVL 157
TLEA KRKNSIFLNSLLVTPNSHRVREFG ITVD TT++YRKL DFRGS NEL+ARVL
Sbjct: 178 TLEALLKRKNSIFLNSLLVTPNSHRVREFGGHITVDGTTRLYRKLTDFRGSANELNARVL 237
Query: 156 ERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
ERY KI SEK++ ++K+YEKQS+NDSASS+SGL+NIK+L+L KRTD++FR
Sbjct: 238 ERY---KICSEKVSAIEKIYEKQSSNDSASSSSGLRNIKELILAKRTDNAFR 286
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 301 bits (770), Expect = 3e-79
Identities = 164/296 (55%), Positives = 209/296 (70%), Gaps = 4/296 (1%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+SA V+G VNEV+D ALG P +CT+CGA + CEGHFG++NFP+TILNPYF+SEV
Sbjct: 32 LSAKVIGAVNEVTDPALGFPN-PIFQCTTCGANDGKKCEGHFGLVNFPYTILNPYFVSEV 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
AQIL KICPGCKS+R K+K S ++ +C+YC+G + GYP KFKVS KD+F ++
Sbjct: 91 AQILKKICPGCKSVRRDKVK-----GSDRTSACKYCDGVLR-GYPPTKFKVSPKDMFGRT 144
Query: 516 AIIAEVGETSVSKCSD--GV-LASDYWDVLPKDSAQENSSLPAN-KRVLLPAQVYDILKD 349
AIIAEV E + K GV LASDYWD +P D+ QE S +N KRVL AQVY ILKD
Sbjct: 145 AIIAEVNENLLKKVQQTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKD 204
Query: 348 VCPKTLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELS 169
+ P LE KRKNSIFL S L+TPNSHRV EFGQ + DE+ ++YRKLIDFRG+ N+LS
Sbjct: 205 IDPGFLEGLLKRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLS 264
Query: 168 ARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
VL+R K+SKIR+ ++ ND + A+GLK +K+L+L KRT+H+FR
Sbjct: 265 MCVLDRIKVSKIRA----------DRSVINDPNAPATGLKYVKELVLAKRTNHAFR 310
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 299 bits (766), Expect = 8e-79
Identities = 162/296 (54%), Positives = 208/296 (70%), Gaps = 4/296 (1%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+SA V+G VNEV+D ALG P +CT+CGA + CEGHFG++NFP+TILNPYF+SEV
Sbjct: 32 LSAKVIGAVNEVTDPALGFPN-PIFQCTTCGANDGKKCEGHFGLVNFPYTILNPYFVSEV 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
AQIL KICPGCKS+R K+K S ++ +C+YC+G + GYP KFKVS KD+F ++
Sbjct: 91 AQILKKICPGCKSVRRDKVK-----VSDRTSACKYCDGVLR-GYPPTKFKVSPKDMFGRT 144
Query: 516 AIIAEVGET---SVSKCSDGVLASDYWDVLPKDSAQENSSLPAN-KRVLLPAQVYDILKD 349
AIIAEV E V K + LASDYWD +P D+ QE S +N KRVL AQVY ILKD
Sbjct: 145 AIIAEVNENLLKKVQKTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKD 204
Query: 348 VCPKTLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELS 169
+ P LE +RKNSIFL S L+TPNSHRV EFGQ + DE+ ++YRKLIDFRG+ N+LS
Sbjct: 205 IDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLS 264
Query: 168 ARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
VL+R K+SKIR+ ++ ND + A+GLK +K+L+L KRT+H+FR
Sbjct: 265 MCVLDRIKVSKIRA----------DRSVINDPNAPATGLKYVKELVLAKRTNHAFR 310
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 284 bits (727), Expect = 3e-74
Identities = 156/305 (51%), Positives = 202/305 (66%), Gaps = 13/305 (4%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S + + +EVSD LG P ++ CT+CGA + CEGHFGVINFP+ IL+PYF+SEV
Sbjct: 35 MSVMEIAAPSEVSDPKLGFPNFSN-HCTTCGAADMKHCEGHFGVINFPYAILHPYFLSEV 93
Query: 696 AQILNKICPGCKSMR-HIKIKDVHSPSS-HQSRSCRYCNGKPKDGYPKMKFKVSSKDVFA 523
QILNKICPGCKS+R ++IK +S S +Q + C+YC G D YP M FK+SSKD+F
Sbjct: 94 VQILNKICPGCKSVRKDLRIKGANSVSKVNQRKGCKYCVGNSIDWYPPMNFKISSKDLFR 153
Query: 522 KSAIIAEVGETS---VSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILK 352
KSAII EV E S V K L SDYWD +PKD QE S + N+RVL +QV +LK
Sbjct: 154 KSAIIVEVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLIRPNRRVLSHSQVRYLLK 213
Query: 351 DVCPKTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFR 190
DV P+ ++ +SIFLN VTPNSHRV E GQR+ D+ T++Y+KL DFR
Sbjct: 214 DVDPEFIKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFR 273
Query: 189 GSPNELSARVLERYKLSKIRSEKLTNLQK--VYEKQSTNDSASSASGLKNIKDLLLGKRT 16
G NELS+ VLE K+SK+ EK +N + V ++ DSAS+ SGL+ +KD++LGKR
Sbjct: 274 GIANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRN 333
Query: 15 DHSFR 1
DH FR
Sbjct: 334 DHCFR 338
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 276 bits (707), Expect = 6e-72
Identities = 152/306 (49%), Positives = 203/306 (66%), Gaps = 14/306 (4%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
I+ + V NEVSD LGLP + +CT+CGA + CEGHFGVI FP+TI++PYF+SEV
Sbjct: 32 IAVITVDAANEVSDPKLGLPNPS-YQCTTCGASSLKFCEGHFGVIKFPYTIIHPYFLSEV 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSR--SCRYCNGKPKDGYPKMKFKVSSKDVFA 523
AQ+LNK+CPGCKS+R V P+S +R CRYC G KD YP M+FK+S+ D+F
Sbjct: 91 AQVLNKVCPGCKSVRQELWGKVEDPTSDYNRPKGCRYCFGSLKDWYPPMRFKLSTTDMFK 150
Query: 522 KSAIIAEVGETSVSK----CSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDIL 355
KS I+ EV E K + G L SDYWD +PKD QE S N+++L AQV+ +L
Sbjct: 151 KSMIMVEVKENMSKKYQKRVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLL 210
Query: 354 KDVCPKTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDF 193
KD+ PK L+ +S+FLNS VTPNSHRV E GQR+ DE T+ Y+K++DF
Sbjct: 211 KDIDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDF 270
Query: 192 RGSPNELSARVLERYKLSK-IRSEKLTNLQKV-YEKQSTNDSASSASGLKNIKDLLLGKR 19
RG+ NEL +RVL+ K+SK I + + L V Y ++ D+A+S+SGL+ IKD++LGKR
Sbjct: 271 RGTANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKR 330
Query: 18 TDHSFR 1
+DH FR
Sbjct: 331 SDHCFR 336
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 276 bits (706), Expect = 8e-72
Identities = 154/304 (50%), Positives = 200/304 (65%), Gaps = 12/304 (3%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS + + VNE++D LG+P + +C++CGAK + CEGHFGVI FPFTIL+PYF++EV
Sbjct: 32 ISVMKIDAVNEITDPKLGVPNPS-CQCSTCGAKDTKKCEGHFGVIKFPFTILHPYFLTEV 90
Query: 696 AQILNKICPGCKSMRHIK-IKDVHSPSSH-QSRSCRYCNGKPKDGYPKMKFKVSSKDVFA 523
QILNKICPGCKS R + +K S S +S+ C+YC D YP MKFKVSSKD+F
Sbjct: 91 VQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFR 150
Query: 522 KSAIIAEVGETSVSKCSD----GVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDIL 355
K+AII E+ E K VL DYWD +PKD QE + L N+RVL AQV+ +L
Sbjct: 151 KTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLL 210
Query: 354 KDVCPKTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDF 193
KD+ P ++ R +S FLN L VTPN+HRV E GQ + D+ ++ Y+KL+DF
Sbjct: 211 KDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDF 270
Query: 192 RGSPNELSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTD 13
RG+ NELS RVL+ K S K +NL+ EK ++ DSAS SGLK IK++LLGKRT+
Sbjct: 271 RGTANELSCRVLDCLKTS-----KASNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTN 323
Query: 12 HSFR 1
HSFR
Sbjct: 324 HSFR 327
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 263 bits (672), Expect = 7e-68
Identities = 155/337 (45%), Positives = 199/337 (59%), Gaps = 45/337 (13%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEG-------------------- 757
IS + + VNE++D LG+P + +C++CGAK + CEG
Sbjct: 32 ISVMKIDAVNEITDPKLGVPNPS-CQCSTCGAKDTKKCEGAVRQVIQKLYLLMISCYLYF 90
Query: 756 -------------HFGVINFPFTILNPYFMSEVAQILNKICPGCKSMRHIK-IKDVHSPS 619
HFGVI FPFTIL+PYF++EV QILNKICPGCKS R + +K S S
Sbjct: 91 LEYAKLXLFIFLGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGS 150
Query: 618 SH-QSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKSAIIAEVGETSVSKCSDG----VLAS 454
+S+ C+YC D YP MKFKVSSKD+F K+AII E+ E K VL
Sbjct: 151 RRLRSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAIIVEMNEKLPKKLQKKSFRPVLPL 210
Query: 453 DYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNSLLVTP 274
DYWD +PKD QE + L N+RVL AQV+ +LKD+ P ++ R +S FLN L VTP
Sbjct: 211 DYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCLPVTP 270
Query: 273 NSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEKLTN 112
N+HRV E GQ + D+ ++ Y+KL+DFRG+ NELS RVL+ K SK+RSEK T
Sbjct: 271 NNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSEKST- 329
Query: 111 LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
+ DSAS SGLK IK++LLGKRT+HSFR
Sbjct: 330 ---------SKDSASKMSGLKWIKEVLLGKRTNHSFR 357
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 250 bits (639), Expect = 4e-64
Identities = 141/305 (46%), Positives = 184/305 (60%), Gaps = 13/305 (4%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS + + VNE++D LG+P + +C++CGAK + CEGHFGVI FPFTIL+PYF++EV
Sbjct: 32 ISVMKIDAVNEITDPKLGVPNPS-CQCSTCGAKDTKKCEGHFGVIKFPFTILHPYFLTEV 90
Query: 696 AQILNKICPGCKSMRH---IKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVF 526
QILNKICPGCKS R +K++ + +S+ C+YC D YP MKFKVSSKD+F
Sbjct: 91 VQILNKICPGCKSTRQGQWVKVRRL------RSKGCKYCAANSNDWYPTMKFKVSSKDLF 144
Query: 525 AKSAIIAEVGETSVSKCSD----GVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDI 358
K+AII E+ E K VL DYWD +PKD QE + L N+RVL AQV+ +
Sbjct: 145 RKTAIIVEMNEKLPKKLQKKSFRPVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYL 204
Query: 357 LKDVCPKTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLID 196
LKD+ P ++ R +S FLN L VTPN+HRV E GQ + D+ ++ Y+KL+D
Sbjct: 205 LKDIDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVD 264
Query: 195 FRGSPNELSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRT 16
FRG+ NELS SAS SGLK IK++LLGKRT
Sbjct: 265 FRGTANELSCH-----------------------------SASKMSGLKWIKEVLLGKRT 295
Query: 15 DHSFR 1
+HSFR
Sbjct: 296 NHSFR 300
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 242 bits (617), Expect = 2e-61
Identities = 137/309 (44%), Positives = 190/309 (61%), Gaps = 17/309 (5%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S L + TV+EV+D+ LGLP + +C++CG+K + CEGHFGVI FPFTIL+PY++SEV
Sbjct: 33 LSVLTIDTVSEVTDSKLGLPNPTN-QCSTCGSKDLKSCEGHFGVIKFPFTILHPYYLSEV 91
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPK------DGYPKMKFKVSSK 535
+ILN++CP CKS+R + R + N K YP MKF VSS+
Sbjct: 92 VRILNQVCPKCKSIR----------KESKVRCLNHLNPKLPVLLILLCWYPAMKFSVSSE 141
Query: 534 DVFAKSAIIAEVGETSVSKCS----DGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQV 367
++F K+ IIA+ E +K LA+DYWD++PKD QE + N+RVL AQV
Sbjct: 142 EIFRKNVIIAKFSERPTNKSQKRGFKKKLAADYWDIIPKDEQQEENITRPNQRVLSHAQV 201
Query: 366 YDILKDVCPKTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRK 205
+L+++ P + +++SIFLN VTPN HRV E GQR+ D+ T+ Y+K
Sbjct: 202 IHLLENIDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKK 261
Query: 204 LIDFRGSPNELSARVLERYKLSKIRSEKLTNLQKVYEKQ-STNDSASSASGLKNIKDLLL 28
++DFRG ELS RVL+ K SKI +K N Q NDS+SS+SGL+ IKD++L
Sbjct: 262 MVDFRGIAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRWIKDVVL 321
Query: 27 GKRTDHSFR 1
GKR D+SFR
Sbjct: 322 GKRNDNSFR 330
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 239 bits (609), Expect = 1e-60
Identities = 132/298 (44%), Positives = 182/298 (61%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S L + +V+ + LGLP +D EC +CG+K + CEGHFGVI FPF IL+PYFMSE+
Sbjct: 32 VSVLEINAAGQVTGSTLGLPNTSD-ECATCGSKNKKICEGHFGVIKFPFPILHPYFMSEI 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
AQILNKICP CKS+RH +S +C+YC+G YP MKFK SS D++ ++
Sbjct: 91 AQILNKICPVCKSIRHKSKGAQLIFGIKRSINCKYCSGNGVGRYPAMKFKFSSNDLYRRT 150
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AII EV + + K L +DYWD LP D+ QE + + N+RVL P QV +L DV P
Sbjct: 151 AIIVEVNDKASKKSLGRSLPADYWDFLPYDAQQEENYV--NRRVLSPGQVTSLLNDVDPN 208
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNE 175
+E R N I LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NE
Sbjct: 209 FIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRGTANE 268
Query: 174 LSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
LS+R+ I ++ +K+ ++A ++SGL+ IKD++LGKR D +FR
Sbjct: 269 LSSRLNPDKTPISIFAD--------IQKKKVAENACNSSGLRWIKDVILGKRNDSTFR 318
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 239 bits (609), Expect = 1e-60
Identities = 132/298 (44%), Positives = 182/298 (61%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S L + +V+ + LGLP +D EC +CG+K + CEGHFGVI FPF IL+PYFMSE+
Sbjct: 32 VSVLEINAAGQVTGSTLGLPNTSD-ECATCGSKNKKICEGHFGVIKFPFPILHPYFMSEI 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
AQILNKICP CKS+RH +S +C+YC+G YP MKFK SS D++ ++
Sbjct: 91 AQILNKICPVCKSIRHKSKGAQLIFGIKRSINCKYCSGNGVGRYPAMKFKFSSNDLYRRT 150
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AII EV + + K L +DYWD LP D+ QE + + N+RVL P QV +L DV P
Sbjct: 151 AIIVEVNDKASKKSLGRSLPADYWDFLPYDAQQEENYV--NRRVLSPGQVTSLLNDVDPN 208
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNE 175
+E R N I LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NE
Sbjct: 209 FIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRGTANE 268
Query: 174 LSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
LS+R+ I ++ +K+ ++A ++SGL+ IKD++LGKR D +FR
Sbjct: 269 LSSRLNPDKTPISIFAD--------IQKKKVAENACNSSGLRWIKDVILGKRNDSTFR 318
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 235 bits (599), Expect = 2e-59
Identities = 127/298 (42%), Positives = 182/298 (61%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S + +G V+EV++ LGLP + EC+SCGAK + CEGHFG I FPFTIL+PYF+S++
Sbjct: 33 LSVMEIGAVSEVTNPRLGLPNPTN-ECSSCGAKDRKACEGHFGFIKFPFTILHPYFLSDI 91
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A++LN ICP CK++R + K S Q R C+YC P YP+M+FK+SSKD+ K+
Sbjct: 92 AKLLNSICPKCKTIRKERQKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKT 151
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AII E+ E K + L DYW +P D+ QE +S+ N++VL QV +LKDV P
Sbjct: 152 AIIVEIDEKPSKK--NKKLPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPS 209
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVRE------FGQRITVDETTKMYRKLIDFRGSPNE 175
E K++ FL VTPN+HRV E +++ D T+ +K++D+RG E
Sbjct: 210 IREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIE 269
Query: 174 LSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
LS V + K+SK+ +K + +Q N S++SGL+ IKD++LGKR D FR
Sbjct: 270 LSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFR 327
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 235 bits (599), Expect = 2e-59
Identities = 127/298 (42%), Positives = 182/298 (61%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S + +G V+EV++ LGLP + EC+SCGAK + CEGHFG I FPFTIL+PYF+S++
Sbjct: 71 LSVMEIGAVSEVTNPRLGLPNPTN-ECSSCGAKDRKACEGHFGFIKFPFTILHPYFLSDI 129
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A++LN ICP CK++R + K S Q R C+YC P YP+M+FK+SSKD+ K+
Sbjct: 130 AKLLNSICPKCKTIRKERQKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKT 189
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AII E+ E K + L DYW +P D+ QE +S+ N++VL QV +LKDV P
Sbjct: 190 AIIVEIDEKPSKK--NKKLPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPS 247
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVRE------FGQRITVDETTKMYRKLIDFRGSPNE 175
E K++ FL VTPN+HRV E +++ D T+ +K++D+RG E
Sbjct: 248 IREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIE 307
Query: 174 LSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
LS V + K+SK+ +K + +Q N S++SGL+ IKD++LGKR D FR
Sbjct: 308 LSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFR 365
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 234 bits (598), Expect = 3e-59
Identities = 127/298 (42%), Positives = 182/298 (61%), Gaps = 6/298 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S + +G V+EV++ LGLP + EC+SCGAK + CEGHFG I FPFTIL+PYF+S++
Sbjct: 33 LSVMEIGAVSEVTNPRLGLPNPTN-ECSSCGAKDRKACEGHFGFIKFPFTILHPYFLSDI 91
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A++LN ICP CK++R + K S Q R C+YC P YP+M+FK+SSKD+ K+
Sbjct: 92 AKLLNSICPKCKTIRKERQKGAGSSRKEQPRVCKYCVRNPAQWYPRMRFKLSSKDLSGKT 151
Query: 516 AIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPK 337
AII E+ E K + L DYW +P D+ QE +S+ N++VL QV +LKDV P
Sbjct: 152 AIIVEIDEKLSKK--NKKLPDDYWGFIPFDAQQEENSVKPNRKVLSCKQVSYLLKDVDPS 209
Query: 336 TLEASFKRKNSIFLNSLLVTPNSHRVRE------FGQRITVDETTKMYRKLIDFRGSPNE 175
E K++ FL VTPN+HRV E +++ D T+ +K++D+RG E
Sbjct: 210 IREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRGRDIE 269
Query: 174 LSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
LS V + K+SK+ +K + +Q N S++SGL+ IKD++LGKR D FR
Sbjct: 270 LSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDCFR 327
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 234 bits (596), Expect = 4e-59
Identities = 129/299 (43%), Positives = 184/299 (61%), Gaps = 7/299 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS L++ T +V+D LGLP S+C++CGA+ + C+GHFG I FP +IL+PY++SEV
Sbjct: 32 ISTLLIETAAQVNDPKLGLPNPT-SQCSTCGAQDTKLCDGHFGSIKFPCSILHPYYLSEV 90
Query: 696 AQILNKICPGCKSMRH-IKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAK 520
+ ILNKICP CK+++ +++K + + CRYC D YP+M+FKVSS+++F +
Sbjct: 91 SLILNKICPACKAIKQGVRVK------GSERKGCRYCFVSSSD-YPRMRFKVSSRELFRR 143
Query: 519 SAIIAEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCP 340
S II E G L DYWD +PKD + ++ +++VL AQV+ +L DV
Sbjct: 144 STIIVEAA---------GELPPDYWDFIPKDPQHDETNTNPHRKVLSHAQVHFLLSDVDS 194
Query: 339 KTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPN 178
+ +S+ L+ LVTPN HRV E GQ + D+ T+ YRKL+DFRG+ N
Sbjct: 195 NFITKFVPTTSSLSLDCFLVTPNCHRVTEVMYSFNNGQSLMFDDRTRAYRKLVDFRGTAN 254
Query: 177 ELSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
EL +RVL+ K+SKI EK E+Q DS S SGL+ IKD++LGKR+DH FR
Sbjct: 255 ELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHCFR 313
>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata]
gi|297332282|gb|EFH62700.1| NRPD1a [Arabidopsis lyrata
subsp. lyrata]
Length = 1456
Score = 232 bits (591), Expect = 2e-58
Identities = 128/300 (42%), Positives = 182/300 (60%), Gaps = 8/300 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
+S + V N+V+D+ LGLP DS C +CG+K + CEGHFGVINF ++I+NPYF+ E+
Sbjct: 31 MSVIKVEAPNQVTDSRLGLPN-PDSICKTCGSKDRKVCEGHFGVINFQYSIINPYFLKEI 89
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A +LNKICPGCK +R K + Q CRYC GYP MKF+V++K+VF +S
Sbjct: 90 AALLNKICPGCKYIR----KKQFQITEDQPERCRYCTS--NTGYPLMKFRVTTKEVFRRS 143
Query: 516 AIIAEVGETSVSKCSD-GVLA--SDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDV 346
I+ EV E S+ K GVLA DYW +P+DS + S L +R+L AQVY +L +
Sbjct: 144 GIVVEVNEESLMKLKKRGVLALPPDYWSFVPQDSNIDESCLKPTRRILTHAQVYALLSGI 203
Query: 345 CPKTLEASFKRKNSIFLNSLLVTPNSHRVREF-----GQRITVDETTKMYRKLIDFRGSP 181
+ ++ +S+ L S VTPN +RV E G R+ DE T++YRKL+ F G+
Sbjct: 204 DQRLIKKDIPMFDSLALTSFPVTPNGYRVTEIVHQFNGARLVFDERTRIYRKLVGFEGNT 263
Query: 180 NELSARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
ELS+RV+E + S++ SE +++ Q GL+ +KD+LLGKR+DH+FR
Sbjct: 264 LELSSRVIECMQYSRLFSENVSSSQDSANPYQKKSDTPKLCGLRFMKDVLLGKRSDHTFR 323
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 230 bits (586), Expect = 6e-58
Identities = 132/300 (44%), Positives = 187/300 (62%), Gaps = 8/300 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS L + +V+ + LGLP +D EC +CG K + CEGHFGVI FP IL+PYFM E+
Sbjct: 32 ISVLEINAAGQVTGSNLGLPNASD-ECATCGTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A ILNKICP CKS+RH + +S C YC+ YP M+F+VSS D+F ++
Sbjct: 91 AHILNKICPVCKSIRHKSKGARLIYGTKRSNDCNYCS-----VYPSMQFRVSSNDLFRRT 145
Query: 516 AIIAEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCP 340
AII EV SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P
Sbjct: 146 AIIVEV---KASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDP 200
Query: 339 KTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPN 178
+E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ N
Sbjct: 201 DFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTAN 260
Query: 177 ELSARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
ELS+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR
Sbjct: 261 ELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFR 320
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 230 bits (586), Expect = 6e-58
Identities = 132/300 (44%), Positives = 187/300 (62%), Gaps = 8/300 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS L + +V+ + LGLP +D EC +CG K + CEGHFGVI FP IL+PYFM E+
Sbjct: 32 ISVLEINAAGQVTGSNLGLPNASD-ECATCGTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A ILNKICP CKS+RH + +S C YC+ YP M+F+VSS D+F ++
Sbjct: 91 AHILNKICPVCKSIRHKSKGARLIYGTKRSNDCNYCS-----VYPSMQFRVSSNDLFRRT 145
Query: 516 AIIAEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCP 340
AII EV SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P
Sbjct: 146 AIIVEV---KASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDP 200
Query: 339 KTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPN 178
+E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ N
Sbjct: 201 DFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTAN 260
Query: 177 ELSARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
ELS+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR
Sbjct: 261 ELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFR 320
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 230 bits (586), Expect = 6e-58
Identities = 132/300 (44%), Positives = 187/300 (62%), Gaps = 8/300 (2%)
Frame = -2
Query: 876 ISALVVGTVNEVSDAALGLPTLNDSECTSCGAKYPRDCEGHFGVINFPFTILNPYFMSEV 697
IS L + +V+ + LGLP +D EC +CG K + CEGHFGVI FP IL+PYFM E+
Sbjct: 32 ISVLEINAAGQVTGSNLGLPNASD-ECATCGTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90
Query: 696 AQILNKICPGCKSMRHIKIKDVHSPSSHQSRSCRYCNGKPKDGYPKMKFKVSSKDVFAKS 517
A ILNKICP CKS+RH + +S C YC+ YP M+F+VSS D+F ++
Sbjct: 91 AHILNKICPVCKSIRHKSKGARLIYGTKRSNDCNYCS-----VYPSMQFRVSSNDLFRRT 145
Query: 516 AIIAEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCP 340
AII EV SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P
Sbjct: 146 AIIVEV---KASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDP 200
Query: 339 KTLEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPN 178
+E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ N
Sbjct: 201 DFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTAN 260
Query: 177 ELSARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFR 1
ELS+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR
Sbjct: 261 ELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFR 320