BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00012233
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial...    62   6e-08
gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus...    62   6e-08
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...    58   1e-06
emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]    58   1e-06
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su...    57   3e-06
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su...    56   5e-06
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly...    56   6e-06

>gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial [Mimulus
           guttatus]
          Length = 73

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKHVGR 98
           MQAYNQAINDLDKELDHLKNEFEV LA+H G+
Sbjct: 36  MQAYNQAINDLDKELDHLKNEFEVALARHTGK 67


>gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus guttatus]
           gi|604305261|gb|EYU24440.1| hypothetical protein
           MIMGU_mgv1a016444mg [Mimulus guttatus]
          Length = 121

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKHVGR 98
           MQAYNQAINDLDKELDHLKNEFEV LA+H G+
Sbjct: 84  MQAYNQAINDLDKELDHLKNEFEVALARHTGK 115


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKH 89
           MQAYNQAINDLDKELD+LKN FEVELAKH
Sbjct: 84  MQAYNQAINDLDKELDYLKNAFEVELAKH 112


>emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]
          Length = 129

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKH 89
           MQAYNQAINDLDKELD+LKN FEVELAKH
Sbjct: 97  MQAYNQAINDLDKELDYLKNAFEVELAKH 125


>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 11-like [Solanum tuberosum]
          Length = 116

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKH 89
           MQAYNQAINDLDKELDHLK++FE ELAKH
Sbjct: 84  MQAYNQAINDLDKELDHLKSQFEGELAKH 112


>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 118

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKH 89
           MQAYNQAINDLDKELDHLK+ FE E+AKH
Sbjct: 84  MQAYNQAINDLDKELDHLKSNFEAEVAKH 112


>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
           [Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
           hypothetical protein POPTR_0009s07520g [Populus
           trichocarpa] gi|118484276|gb|ABK94017.1| unknown
           [Populus trichocarpa] gi|222849662|gb|EEE87209.1|
           DNA-directed RNA polymerase II 13.6 kDa polypeptide
           family protein [Populus trichocarpa]
           gi|550331237|gb|ERP56915.1| hypothetical protein
           POPTR_0009s07520g [Populus trichocarpa]
          Length = 116

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +3

Query: 3   MQAYNQAINDLDKELDHLKNEFEVELAKHVGR 98
           MQAYNQAINDLDKELDHLKN FE ELA   G+
Sbjct: 84  MQAYNQAINDLDKELDHLKNAFEAELANRPGQ 115