BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00011484
         (807 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_042282.1| hypothetical protein SYNVgp3 [Sonchus yellow ne...    77   6e-12
gb|AGO46418.1| P protein [Sonchus yellow net virus]                    77   6e-12
gb|AAX94193.1| truncated phosphoprotein [Sonchus yellow net virus]     77   6e-12

>ref|NP_042282.1| hypothetical protein SYNVgp3 [Sonchus yellow net virus]
           gi|138757|sp|P19692.1|MATRX_SYNV RecName: Full=Matrix
           protein; AltName: Full=M2 protein
           gi|335146|gb|AAA47899.1| SYNV M2 protein [Sonchus yellow
           net virus] gi|484032|gb|AAA50381.1| putative [Sonchus
           yellow net virus]
          Length = 345

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
 Frame = +1

Query: 13  GKLGIAIVKICEELVKQNTAPASIIRDMGDLVDEMRDGVAEMKRMNKIVLGYLPXXXXXX 192
           G L  AI+     +  Q   P+++++ M +++D       E+K + K +   +P      
Sbjct: 88  GDLIAAILSFGCSISAQAIVPSTLLKTMSEMLDSFATRNHELKLITKDLQEVVPRQVLKA 147

Query: 193 XXXXXXTGSHPHAGDVDNAAMEYSREKIDQQINPLDIPEENSSTMKGQSAEEKERNLKRK 372
                   +   +   ++  ++ S  K +Q I   D  + NSS          +RN +  
Sbjct: 148 KKKSKAKSAEGPSASTED--IKDSDTKGNQDIG--DNGDLNSSI--------NQRNREIC 195

Query: 373 YEYLKTTYATHYSSKEFDAKPAQVKGKLMEYYVSRILNVQPQTWKENKS---QSQMLMDL 543
           Y+        HY++ EF+A   + + ++M+YY+  IL      W  N +   ++ ML DL
Sbjct: 196 YK--------HYTTDEFEALSLEKRQEIMKYYIQYILGA----WGYNATDPTKTAMLYDL 243

Query: 544 IDKKRLLMVLRQAKEGTLDTETVHEAVDEAVDAINECHLPYGQYVAMKEINEKGVPYVGL 723
           IDK  ++ V+RQ+KEGTL ++ +  A+DE +D++N     YG Y A    N+ G PY+ L
Sbjct: 244 IDKHTVITVMRQSKEGTLTSDDILMAIDEVIDSVNSMSSCYGGYKATIG-NDNGTPYLVL 302


>gb|AGO46418.1| P protein [Sonchus yellow net virus]
          Length = 345

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
 Frame = +1

Query: 13  GKLGIAIVKICEELVKQNTAPASIIRDMGDLVDEMRDGVAEMKRMNKIVLGYLPXXXXXX 192
           G L  AI+     +  Q   P+++++ M +++D       E+K + K +   +P      
Sbjct: 88  GDLIAAILSFGCSISAQAIVPSTLLKTMSEMLDSFATRNHELKLITKDLQEVVPRQVLKT 147

Query: 193 XXXXXXTGSHPHAGDVDNAAMEYSREKIDQQINPLDIPEENSSTMKGQSAEEKERNLKRK 372
                   +   +   ++  ++ S  K +Q I   D  + NSS          +RN +  
Sbjct: 148 KKKSKAKSAEGPSASTED--IKDSDTKGNQDIG--DNGDLNSSI--------NQRNREIC 195

Query: 373 YEYLKTTYATHYSSKEFDAKPAQVKGKLMEYYVSRILNVQPQTWKENKS---QSQMLMDL 543
           Y+        HY++ EF+A   + + ++M+YY+  IL      W  N +   ++ ML DL
Sbjct: 196 YK--------HYTTDEFEALSLEKRQEIMKYYIQYILGA----WGYNATDPTKTAMLYDL 243

Query: 544 IDKKRLLMVLRQAKEGTLDTETVHEAVDEAVDAINECHLPYGQYVAMKEINEKGVPYVGL 723
           IDK  ++ V+RQ+KEGTL ++ +  A+DE +D++N     YG Y A    N+ G PY+ L
Sbjct: 244 IDKHTVITVMRQSKEGTLTSDDILMAIDEVIDSVNSVSSCYGGYKATIG-NDNGTPYLVL 302


>gb|AAX94193.1| truncated phosphoprotein [Sonchus yellow net virus]
          Length = 308

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
 Frame = +1

Query: 13  GKLGIAIVKICEELVKQNTAPASIIRDMGDLVDEMRDGVAEMKRMNKIVLGYLPXXXXXX 192
           G L  AI+     +  Q   P+++++ M +++D       E+K + K +   +P      
Sbjct: 88  GDLIAAILSFGCSISAQAIVPSTLLKTMSEMLDSFATRNHELKLITKDLQEVVPRQVLKT 147

Query: 193 XXXXXXTGSHPHAGDVDNAAMEYSREKIDQQINPLDIPEENSSTMKGQSAEEKERNLKRK 372
                   +   +   ++  ++ S  K +Q I   D  + NSS          +RN +  
Sbjct: 148 KKKSKAKSAEGPSASTED--IKDSDTKGNQDIG--DNGDLNSSI--------NQRNREIC 195

Query: 373 YEYLKTTYATHYSSKEFDAKPAQVKGKLMEYYVSRILNVQPQTWKENKS---QSQMLMDL 543
           Y+        HY++ EF+A   + + ++M+YY+  IL      W  N +   ++ ML DL
Sbjct: 196 YK--------HYTTDEFEALSLEKRQEIMKYYIQYILGA----WGYNATDPTKTAMLYDL 243

Query: 544 IDKKRLLMVLRQAKEGTLDTETVHEAVDEAVDAINECHLPYGQYVAMKEINEKGVPYVGL 723
           IDK  ++ V+RQ+KEGTL ++ +  A+DE +D++N     YG Y A    N+ G PY+ L
Sbjct: 244 IDKHTVITVMRQSKEGTLTSDDILMAIDEVIDSVNSMSSCYGGYKATIG-NDNGTPYLVL 302