BLASTX nr result

ID: Mentha23_contig00009976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00009976
         (1248 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    70   2e-09

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein, putative
            isoform 1 [Theobroma cacao]
            gi|590586605|ref|XP_007015751.1| F-box and associated
            interaction domains-containing protein, putative isoform
            1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box and
            associated interaction domains-containing protein,
            putative isoform 1 [Theobroma cacao]
            gi|508786114|gb|EOY33370.1| F-box and associated
            interaction domains-containing protein, putative isoform
            1 [Theobroma cacao]
          Length = 387

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
 Frame = -1

Query: 1248 VELYSLKNNSWKEISAPEVRVENCGI---YVNNKCYW--ISYSPFSVISFDFEKESLSSF 1084
            VELYSLK++SWKEIS PE       +   YVN   YW     S + ++SFD   E  S+ 
Sbjct: 193  VELYSLKSDSWKEISVPEAHPYASPLFNNYVNGSYYWQATGNSDYLILSFDMANEKFST- 251

Query: 1083 IPLPKALPTMHSSTDDVDVFDGLRIFEYIGSLAAIGYKKSGLCTLFEAYTLKXXXXXXXX 904
              LP  LPT   S         L++ ++ GSL AI Y + G     + + +         
Sbjct: 252  --LP--LPTFGGSLAQY----YLQLLDFNGSLGAIVYPREGTEKSIDLWVMN-------- 295

Query: 903  XXXXQKKFTVK-VFGDHKPLGFGENGRSLFLQGNNAKDKCYQLGVFDLIDQYLEKLPIFA 727
                 ++F+++ V G  +PLGF +NG  LFL+ +N     ++L +FD   + L+ L I A
Sbjct: 296  -GSWTRQFSIESVSGVERPLGFWKNG-ELFLESSN-----HELVLFDPATRELKNLGIHA 348


Top