BLASTX nr result
ID: Mentha23_contig00009789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00009789
(686 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 147 4e-33
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 147 4e-33
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 147 4e-33
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 147 4e-33
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 147 4e-33
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 147 4e-33
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 147 4e-33
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 147 4e-33
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 146 7e-33
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su... 145 9e-33
ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II su... 145 9e-33
ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II su... 145 9e-33
gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Trit... 145 9e-33
tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II sub... 145 9e-33
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su... 145 9e-33
dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare] 145 9e-33
gb|ADE76913.1| unknown [Picea sitchensis] 145 9e-33
ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [S... 145 9e-33
gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| pu... 145 9e-33
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo... 145 9e-33
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1108 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1167
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1168 LMAMAIAPRM 1177
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1106 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1165
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1166 LMAMAIAPRM 1175
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1130 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1189
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1190 LMAMAIAPRM 1199
>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
vesca subsp. vesca]
Length = 1191
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1107 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1166
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1167 LMAMAIAPRM 1176
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1106 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1165
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1166 LMAMAIAPRM 1175
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1109 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1168
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1169 LMAMAIAPRM 1178
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1108 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1167
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1168 LMAMAIAPRM 1177
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 147 bits (370), Expect = 4e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1110 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1169
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1170 LMAMAIAPRM 1179
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 146 bits (368), Expect = 7e-33
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1106 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1165
Query: 181 LMAMAIAPRM 210
LM+MAIAPRM
Sbjct: 1166 LMSMAIAPRM 1175
>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
brachyantha]
Length = 1184
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1101 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1160
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1161 LMAMAIAPRM 1170
>ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X2 [Setaria italica]
Length = 1190
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1107 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1166
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1167 LMAMAIAPRM 1176
>ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X1 [Setaria italica]
Length = 1226
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1143 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1202
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1203 LMAMAIAPRM 1212
>gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Triticum urartu]
Length = 1204
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1096 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1155
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1156 LMAMAIAPRM 1165
>tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 279 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 338
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 339 LMAMAIAPRM 348
>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
[Brachypodium distachyon]
Length = 1228
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1145 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1204
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1205 LMAMAIAPRM 1214
>dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 181 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 240
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 241 LMAMAIAPRM 250
>gb|ADE76913.1| unknown [Picea sitchensis]
Length = 135
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCERCGLIAIANLKKNSF+CRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 49 FLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNKTDIVQVHIPYACKLLFQE 108
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 109 LMAMAIAPRM 118
>ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor]
gi|241920604|gb|EER93748.1| hypothetical protein
SORBIDRAFT_01g013470 [Sorghum bicolor]
Length = 1218
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1135 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1194
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1195 LMAMAIAPRM 1204
>gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| putative
DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 279 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 338
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 339 LMAMAIAPRM 348
>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 145 bits (367), Expect = 9e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = +1
Query: 1 FLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 180
FLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
Sbjct: 1135 FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1194
Query: 181 LMAMAIAPRM 210
LMAMAIAPRM
Sbjct: 1195 LMAMAIAPRM 1204