BLASTX nr result
ID: Mentha23_contig00009045
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha23_contig00009045 (611 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus... 254 2e-88 sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 244 1e-83 ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 241 2e-82 sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 246 2e-82 emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum] 246 2e-82 emb|CAJ13818.1| DNA-dependent RNA polymerase 1 [Chrysanthemum x ... 243 4e-82 ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 240 1e-81 gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 240 5e-81 ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 242 7e-81 emb|CBI36559.3| unnamed protein product [Vitis vinifera] 242 7e-81 ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun... 236 3e-80 ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 239 4e-80 ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 237 6e-80 ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 238 1e-79 ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 236 3e-79 ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 237 3e-78 ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal... 228 3e-77 ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal... 228 3e-77 dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol... 228 3e-77 ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 231 6e-77 >gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus] Length = 941 Score = 254 bits (649), Expect(2) = 2e-88 Identities = 118/127 (92%), Positives = 123/127 (96%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIH+ANLYGGGVEKLSYD RV+FVENN Sbjct: 528 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGVEKLSYDDRVAFVENN 587 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I+EI DSADNSLNGNRWWLKAEDPFQCLAACINL EALKS SPHTVISHLPIHQDGSCNG Sbjct: 588 ISEIFDSADNSLNGNRWWLKAEDPFQCLAACINLVEALKSPSPHTVISHLPIHQDGSCNG 647 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 648 LQHYAAL 654 Score = 98.2 bits (243), Expect(2) = 2e-88 Identities = 51/75 (68%), Positives = 58/75 (77%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPE-LLSDDDKEIXXXXXXXXXXXXINQERHSQ 178 +RIL+VVEN+WAAGG+IAGLVNRE++PIPE LLS+D KE INQERHSQ Sbjct: 434 KRILTVVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWKWSVRKVKKINQERHSQ 493 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR MK Sbjct: 494 RCDTELKLSVARKMK 508 >sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3; Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName: Full=DNA-directed RNA polymerase 3A, chloroplastic; AltName: Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3A; Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type RNA polymerase [Nicotiana sylvestris] gi|21425679|emb|CAC95027.2| plastid RNA polymerase [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 977 Score = 244 bits (624), Expect(2) = 1e-83 Identities = 113/127 (88%), Positives = 121/127 (95%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GG+EKL YDAR++FVEN+ Sbjct: 564 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENH 623 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTV SHLPIHQDGSCNG Sbjct: 624 IDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNG 683 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 684 LQHYAAL 690 Score = 91.7 bits (226), Expect(2) = 1e-83 Identities = 46/74 (62%), Positives = 55/74 (74%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 +RILSVVE++WA GG+IAGLV+R++VPIPEL SDD E+ INQE HSQR Sbjct: 471 KRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQELHSQR 530 Query: 182 CDVELKLSVARNMK 223 CD ELKLSVAR +K Sbjct: 531 CDTELKLSVARKLK 544 >ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum tuberosum] Length = 1015 Score = 241 bits (616), Expect(2) = 2e-82 Identities = 111/127 (87%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVEN+ Sbjct: 602 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENH 661 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +ILDSA N LNGNRWWL AEDP QCLAACINLSEALKS SPHTVISHLPIHQDGSCNG Sbjct: 662 IDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNG 721 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 722 LQHYAAL 728 Score = 91.3 bits (225), Expect(2) = 2e-82 Identities = 46/74 (62%), Positives = 55/74 (74%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 +RILSVVE++WA GG+IAGLV+R++VPIPEL SDD E+ INQE HSQR Sbjct: 509 KRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQR 568 Query: 182 CDVELKLSVARNMK 223 CD ELKLSVAR +K Sbjct: 569 CDTELKLSVARKLK 582 >sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName: Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3B; Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase [Nicotiana tabacum] Length = 977 Score = 246 bits (629), Expect(2) = 2e-82 Identities = 115/127 (90%), Positives = 122/127 (96%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL YDAR++FVEN+ Sbjct: 564 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENH 623 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG Sbjct: 624 IHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 683 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 684 LQHYAAL 690 Score = 86.3 bits (212), Expect(2) = 2e-82 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELL-SDDDKEIXXXXXXXXXXXXINQERHSQ 178 +RIL+VVE++WA GG+IAGLV+R++VPIPEL SDD E+ INQE HSQ Sbjct: 470 KRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQ 529 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR +K Sbjct: 530 RCDTELKLSVARKLK 544 >emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum] Length = 557 Score = 246 bits (629), Expect(2) = 2e-82 Identities = 115/127 (90%), Positives = 122/127 (96%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGVEKL YDAR++FVEN+ Sbjct: 147 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENH 206 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG Sbjct: 207 IHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 266 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 267 LQHYAAL 273 Score = 86.3 bits (212), Expect(2) = 2e-82 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELL-SDDDKEIXXXXXXXXXXXXINQERHSQ 178 +RIL+VVE++WA GG+IAGLV+R++VPIPEL SDD E+ INQE HSQ Sbjct: 53 KRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQ 112 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR +K Sbjct: 113 RCDTELKLSVARKLK 127 >emb|CAJ13818.1| DNA-dependent RNA polymerase 1 [Chrysanthemum x morifolium] Length = 383 Score = 243 bits (621), Expect(2) = 4e-82 Identities = 111/127 (87%), Positives = 121/127 (95%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWL+IHLANLYG GVEKLSYD R++FVE++ Sbjct: 147 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLRIHLANLYGSGVEKLSYDGRLAFVESH 206 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I+EI+DSADN L GNRWWL AEDPFQCLAACINL+E LKSSSPHTVISHLP+HQDGSCNG Sbjct: 207 ISEIIDSADNPLGGNRWWLTAEDPFQCLAACINLAETLKSSSPHTVISHLPVHQDGSCNG 266 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 267 LQHYAAL 273 Score = 88.2 bits (217), Expect(2) = 4e-82 Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 +R+L+VVE++WAAGGDIAGLVNR++V IP+L S+D EI +NQE HSQR Sbjct: 53 KRLLNVVESIWAAGGDIAGLVNRQDVSIPDLNSEDSSEIKEWRWSVRKAKKMNQELHSQR 112 Query: 182 CDVELKLS-VARNMK 223 CD+ELKLS VAR MK Sbjct: 113 CDIELKLSVVARRMK 127 >ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum lycopersicum] Length = 1007 Score = 240 bits (612), Expect(2) = 1e-81 Identities = 110/127 (86%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+EKL YDAR++FVEN+ Sbjct: 594 MHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENH 653 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA+KS SPHTVISHLPIHQDGSCNG Sbjct: 654 IDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNG 713 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 714 LQHYAAL 720 Score = 89.7 bits (221), Expect(2) = 1e-81 Identities = 45/74 (60%), Positives = 54/74 (72%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 +RILSVVE +WA GG+IAGLV+R++VPIPEL SDD E+ INQE HSQR Sbjct: 501 KRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQR 560 Query: 182 CDVELKLSVARNMK 223 CD ELKLSVAR ++ Sbjct: 561 CDTELKLSVARKLR 574 >gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] Length = 952 Score = 240 bits (613), Expect(2) = 5e-81 Identities = 110/127 (86%), Positives = 120/127 (94%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRGILEF++GRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVENN Sbjct: 539 MHPHLNHLSSDLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENN 598 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I E+ DSADN L+GNRWWLKAEDPFQ LAACIN+SEAL+SSSPHTVISHLPIHQDGSCNG Sbjct: 599 ITEVFDSADNPLSGNRWWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSCNG 658 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 659 LQHYAAL 665 Score = 87.4 bits (215), Expect(2) = 5e-81 Identities = 46/74 (62%), Positives = 52/74 (70%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 + ILSVVE++WAAGG+IAGLVNRE+VP+PEL SDD EI N E HS R Sbjct: 446 KSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKNNMEMHSLR 505 Query: 182 CDVELKLSVARNMK 223 CD ELKLSVAR MK Sbjct: 506 CDTELKLSVARAMK 519 >ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis vinifera] Length = 979 Score = 242 bits (617), Expect(2) = 7e-81 Identities = 110/127 (86%), Positives = 120/127 (94%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++FV+N+ Sbjct: 566 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNH 625 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDGSCNG Sbjct: 626 LDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNG 685 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 686 LQHYAAL 692 Score = 85.5 bits (210), Expect(2) = 7e-81 Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXXINQERHSQ 178 RR+LSVVE++WA GG++ GLV+RENVP+PE S +D EI INQERHS Sbjct: 472 RRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSL 531 Query: 179 RCDVELKLSVARNMK 223 RCD E+KLSVAR MK Sbjct: 532 RCDTEIKLSVARKMK 546 >emb|CBI36559.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 242 bits (617), Expect(2) = 7e-81 Identities = 110/127 (86%), Positives = 120/127 (94%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGVEKLSYD R++FV+N+ Sbjct: 395 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNH 454 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTVISHLPIHQDGSCNG Sbjct: 455 LDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNG 514 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 515 LQHYAAL 521 Score = 85.5 bits (210), Expect(2) = 7e-81 Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXXINQERHSQ 178 RR+LSVVE++WA GG++ GLV+RENVP+PE S +D EI INQERHS Sbjct: 301 RRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSL 360 Query: 179 RCDVELKLSVARNMK 223 RCD E+KLSVAR MK Sbjct: 361 RCDTEIKLSVARKMK 375 >ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] gi|462398756|gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica] Length = 976 Score = 236 bits (601), Expect(2) = 3e-80 Identities = 108/127 (85%), Positives = 117/127 (92%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSY+ R++FV+N+ Sbjct: 563 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNH 622 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDGSCNG Sbjct: 623 IDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNG 682 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 683 LQHYAAL 689 Score = 89.7 bits (221), Expect(2) = 3e-80 Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELL-SDDDKEIXXXXXXXXXXXXINQERHSQ 178 +++LSVVE++WA GG+IAGLVNRE+VP+P+ S+D KEI INQERHSQ Sbjct: 469 KKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQ 528 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR MK Sbjct: 529 RCDTELKLSVARKMK 543 >ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 973 Score = 239 bits (610), Expect(2) = 4e-80 Identities = 110/127 (86%), Positives = 117/127 (92%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGVEKLSYD R+SFV+N+ Sbjct: 560 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNH 619 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SPHTVISHLPIHQDGSCNG Sbjct: 620 IDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNG 679 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 680 LQHYAAL 686 Score = 85.5 bits (210), Expect(2) = 4e-80 Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 +++L+VVE++WA GG+IAGLV+RE+VP+PE S+D EI +NQERHSQ Sbjct: 466 KKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQ 525 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR MK Sbjct: 526 RCDTELKLSVARRMK 540 >ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 882 Score = 237 bits (604), Expect(2) = 6e-80 Identities = 108/127 (85%), Positives = 118/127 (92%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHL HLSSDLCRG+LEF +GRPLGKSGLRWLKIHLANLY GGVEKLS+D R++FVEN+ Sbjct: 469 MHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENH 528 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 ++EI DSA N +NG RWWLKAEDPFQCLAACINLSEAL S+SPHTVISHLPIHQDGSCNG Sbjct: 529 LSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNG 588 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 589 LQHYAAL 595 Score = 87.4 bits (215), Expect(2) = 6e-80 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXXINQERHSQ 178 RR+L VVE +W +GG+IAGLV+RE++PIPE S DD EI INQERHSQ Sbjct: 375 RRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQ 434 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR +K Sbjct: 435 RCDTELKLSVARKLK 449 >ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus sinensis] Length = 1009 Score = 238 bits (608), Expect(2) = 1e-79 Identities = 108/127 (85%), Positives = 121/127 (95%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++FVEN+ Sbjct: 596 MHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENH 655 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALKSSSPH+VISHLPIHQDGSCNG Sbjct: 656 LYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNG 715 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 716 LQHYAAL 722 Score = 85.1 bits (209), Expect(2) = 1e-79 Identities = 43/75 (57%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 +++LSV+E++W +GG+IAGLV+R +VPIPE LS+D E+ INQERHSQ Sbjct: 502 KQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQ 561 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR MK Sbjct: 562 RCDTELKLSVARRMK 576 >ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] gi|222854390|gb|EEE91937.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa] Length = 982 Score = 236 bits (603), Expect(2) = 3e-79 Identities = 108/127 (85%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHL HLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVEN+ Sbjct: 569 MHPHLTHLSSDLCRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENH 628 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 ++EI DSA+N +NG RWWL AEDPFQCLAACINLSEALKS+SPHTVISHLPIHQDGSCNG Sbjct: 629 LSEIFDSAENPVNGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSCNG 688 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 689 LQHYAAL 695 Score = 85.5 bits (210), Expect(2) = 3e-79 Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Frame = +2 Query: 5 RILSVVENLWAAGGDIAGLVNRENVPIPELLSDDD-KEIXXXXXXXXXXXXINQERHSQR 181 ++L VVE +WA+GG+ AGLVNR ++PIPE LS DD EI INQERHSQR Sbjct: 476 KVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQR 535 Query: 182 CDVELKLSVARNMK 223 CD ELKLSVAR +K Sbjct: 536 CDTELKLSVARKLK 549 >ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] gi|557556792|gb|ESR66806.1| hypothetical protein CICLE_v10007333mg [Citrus clementina] Length = 1012 Score = 237 bits (605), Expect(2) = 3e-78 Identities = 107/127 (84%), Positives = 121/127 (95%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGVEKLS+D R++FVEN+ Sbjct: 599 MHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENH 658 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + EI DSA+N +NG+RWWL AEDPFQCLAACINL+EALKSSSPH+VISHLPIHQDGSCNG Sbjct: 659 LYEIFDSAENPINGSRWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNG 718 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 719 LQHYAAL 725 Score = 81.3 bits (199), Expect(2) = 3e-78 Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 +++LSV+E++W +GG+IAGLV+R +V IPE LS+D E+ INQERHSQ Sbjct: 505 KQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQ 564 Query: 179 RCDVELKLSVARNMK 223 RCD ELKLSVAR MK Sbjct: 565 RCDTELKLSVARRMK 579 >ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] gi|3914826|sp|O24600.1|RPOT3_ARATH RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast single-subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|2330564|emb|CAA69717.1| chloroplast single-subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|4115372|gb|AAD03373.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] Length = 993 Score = 228 bits (582), Expect(2) = 3e-77 Identities = 103/127 (81%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+DAR++FVEN+ Sbjct: 580 MHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENH 639 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDGSCNG Sbjct: 640 LDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNG 699 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 700 LQHYAAL 706 Score = 86.7 bits (213), Expect(2) = 3e-77 Identities = 47/75 (62%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 R IL VVE LWA GG+IAGLVNRE+VPIPE S+D +E+ IN+ERHS Sbjct: 486 RNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSL 545 Query: 179 RCDVELKLSVARNMK 223 RCDVELKLSVAR MK Sbjct: 546 RCDVELKLSVARKMK 560 >ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana] Length = 895 Score = 228 bits (582), Expect(2) = 3e-77 Identities = 103/127 (81%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+DAR++FVEN+ Sbjct: 580 MHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENH 639 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDGSCNG Sbjct: 640 LDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNG 699 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 700 LQHYAAL 706 Score = 86.7 bits (213), Expect(2) = 3e-77 Identities = 47/75 (62%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 R IL VVE LWA GG+IAGLVNRE+VPIPE S+D +E+ IN+ERHS Sbjct: 486 RNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSL 545 Query: 179 RCDVELKLSVARNMK 223 RCDVELKLSVAR MK Sbjct: 546 RCDVELKLSVARKMK 560 >dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis thaliana] Length = 786 Score = 228 bits (582), Expect(2) = 3e-77 Identities = 103/127 (81%), Positives = 119/127 (93%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGVEKLS+DAR++FVEN+ Sbjct: 580 MHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVENH 639 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP++VISHLPIHQDGSCNG Sbjct: 640 LDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNG 699 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 700 LQHYAAL 706 Score = 86.7 bits (213), Expect(2) = 3e-77 Identities = 47/75 (62%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPEL-LSDDDKEIXXXXXXXXXXXXINQERHSQ 178 R IL VVE LWA GG+IAGLVNRE+VPIPE S+D +E+ IN+ERHS Sbjct: 486 RNILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSL 545 Query: 179 RCDVELKLSVARNMK 223 RCDVELKLSVAR MK Sbjct: 546 RCDVELKLSVARKMK 560 >ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 231 bits (590), Expect(2) = 6e-77 Identities = 105/127 (82%), Positives = 118/127 (92%) Frame = +1 Query: 229 MHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGVEKLSYDARVSFVENN 408 MHPHLNHLSSDLCRG+LEFA+GRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV+++ Sbjct: 562 MHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDH 621 Query: 409 IAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNG 588 + I DSA N +NG+RWWL AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGSCNG Sbjct: 622 LDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNG 681 Query: 589 LQHYAAL 609 LQHYAAL Sbjct: 682 LQHYAAL 688 Score = 82.8 bits (203), Expect(2) = 6e-77 Identities = 44/74 (59%), Positives = 51/74 (68%) Frame = +2 Query: 2 RRILSVVENLWAAGGDIAGLVNRENVPIPELLSDDDKEIXXXXXXXXXXXXINQERHSQR 181 R +LSVVE+LWA GG+ AGLV+R++VPIPE D E+ INQE HSQR Sbjct: 469 RSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQR 528 Query: 182 CDVELKLSVARNMK 223 CDVELKLSVAR MK Sbjct: 529 CDVELKLSVARKMK 542