BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00008988
         (725 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   340   3e-91
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   311   1e-82
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   1e-79
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   298   2e-78
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              256   7e-66
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   256   7e-66
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   248   1e-63
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   243   6e-62
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   243   6e-62
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   241   2e-61
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   241   2e-61
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   241   2e-61
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   241   2e-61
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   238   2e-60
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   237   3e-60
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   234   3e-59
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   232   1e-58
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   231   1e-58
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   230   3e-58
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   230   4e-58

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  340 bits (872), Expect = 3e-91
 Identities = 168/245 (68%), Positives = 202/245 (82%), Gaps = 5/245 (2%)
 Frame = -1

Query: 722  TRDEQNEYEGSTRSKKTDA-----KPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKT 558
            T+      +G T   K+       K RRA   V + + FEVHF+F  EPH+L+AQ+AQKT
Sbjct: 1464 TKSSVGSSKGKTSFDKSSVELKGKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQLAQKT 1523

Query: 557  AQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTD 378
            ++KV++++SG++SQC++V YDPDEKTVIW+++ KPKRGE+K +   +D  YWA+KASG D
Sbjct: 1524 SKKVYIRKSGKVSQCKMVSYDPDEKTVIWDNSKKPKRGESKSEE--EDTSYWAVKASGVD 1581

Query: 377  FKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLI 198
            FKSFW MH+DLDLSRLYSNN+HA+L TYGVEAARAT+IREVK VFDIYGVKIDYRHLSLI
Sbjct: 1582 FKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEAARATIIREVKHVFDIYGVKIDYRHLSLI 1641

Query: 197  ADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLG 18
            AD+MTHTG Y PMSR GSISESLSPFLKMSFETASKFIVEAAS GL D+L+TPSSRICLG
Sbjct: 1642 ADHMTHTGSYLPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDKLDTPSSRICLG 1701

Query: 17   LPVKV 3
            LPVK+
Sbjct: 1702 LPVKM 1706


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  311 bits (798), Expect = 1e-82
 Identities = 151/225 (67%), Positives = 184/225 (81%), Gaps = 1/225 (0%)
 Frame = -1

Query: 674  TDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG-EMSQCRLVQY 498
            T  +  RA+    E  S EVHFKFT+EPHVLLAQ+ QKTA+KV++K++G +++QC+LVQY
Sbjct: 1393 TGKRENRAIYMEIEGLSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQY 1452

Query: 497  DPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHEDLDLSRLYSNN 318
            DPDEKTVIW+D  K ++     +   DDA YWA+KASG+D +SFW M + LDL+RLY NN
Sbjct: 1453 DPDEKTVIWDDDKKKEKATKNGRKADDDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNN 1512

Query: 317  VHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSIS 138
            +H++L TYGVEAA AT+IRE+K VFDIYGVKIDYRHLSLI D+M H GGYRPMSR GSI 
Sbjct: 1513 IHSMLKTYGVEAASATIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIP 1572

Query: 137  ESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            +S+SPFLKMSFETASKFIVEAA  GL D+LE+PSSRICLGLPV+V
Sbjct: 1573 DSVSPFLKMSFETASKFIVEAAIYGLRDDLESPSSRICLGLPVRV 1617


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  301 bits (771), Expect = 1e-79
 Identities = 150/247 (60%), Positives = 193/247 (78%), Gaps = 7/247 (2%)
 Frame = -1

Query: 722  TRDEQNEYEGSTRSKKTDAKPRRAVKH----VF---ERSSFEVHFKFTTEPHVLLAQIAQ 564
            T+  +++ +  T  K+   K RR+ K     VF   E   FEVHF+F  EPH+LLAQ+AQ
Sbjct: 1422 TKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQ 1481

Query: 563  KTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASG 384
            KTA+KV++K SG++ QCR+V+Y+  E TV+W++       + K Q+   D+ YWA+KA+G
Sbjct: 1482 KTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEY------QTKQQSQDSDSAYWALKAAG 1535

Query: 383  TDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLS 204
             DF +FW M +DLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYGV+ID+RHLS
Sbjct: 1536 VDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLS 1595

Query: 203  LIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRIC 24
            LIAD+MTHTGGY+PMSR GSISESLSPFLKMSFETASKFIVEAA+ GL D LETPSSRIC
Sbjct: 1596 LIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRIC 1655

Query: 23   LGLPVKV 3
            LGLPVK+
Sbjct: 1656 LGLPVKM 1662


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  298 bits (762), Expect = 2e-78
 Identities = 149/236 (63%), Positives = 186/236 (78%), Gaps = 7/236 (2%)
 Frame = -1

Query: 689  TRSKKTDAKPRRAVKH----VF---ERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS 531
            T  K+   K RR+ K     VF   E   FEVHF+F  EPH+LLAQ+AQKTA+KV++K S
Sbjct: 1435 TTVKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNS 1494

Query: 530  GEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 351
            G++ QCR+V+Y+  E TV+W++       + K Q    D+ YWA+KA+G DF +FW M +
Sbjct: 1495 GKIDQCRMVKYEVTENTVMWDEN------QTKQQRQDSDSAYWALKAAGVDFGTFWEMQD 1548

Query: 350  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 171
            DLD++R+Y+NN+ A+LNTYGVEAARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGG
Sbjct: 1549 DLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGG 1608

Query: 170  YRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            Y+PMSR GSISESLSPFLKMSFETASKFIVEAA+ GL D LETPSSRICLGLPVK+
Sbjct: 1609 YQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKM 1664


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  256 bits (653), Expect = 7e-66
 Identities = 134/257 (52%), Positives = 184/257 (71%), Gaps = 16/257 (6%)
 Frame = -1

Query: 725  ETRDEQNEYEGSTRSKK-----TDAKPR---RAVKHVFERSS--------FEVHFKFTTE 594
            + +DE ++    ++S K     T+AK +   RA+K  F+R+         FEVHF+FT E
Sbjct: 1405 DPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1464

Query: 593  PHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADD 414
            PH+LLAQIAQK A KV+++ SG++  C+++  + D+      D   PK+ EN P  G + 
Sbjct: 1465 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD---PKKRENIP--GEEK 1519

Query: 413  ALYWAMKASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIY 234
                A++ +G DF +FW M ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ Y
Sbjct: 1520 KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAY 1579

Query: 233  GVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLAD 54
            GVK++ RHLSLIAD+MTH+GGYRPM+R G I+ES+SPF KM+FETASKFIVEAAS G+ D
Sbjct: 1580 GVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTD 1639

Query: 53   ELETPSSRICLGLPVKV 3
             LE+ S+RICLGLPVK+
Sbjct: 1640 NLESASARICLGLPVKM 1656


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  256 bits (653), Expect = 7e-66
 Identities = 134/257 (52%), Positives = 184/257 (71%), Gaps = 16/257 (6%)
 Frame = -1

Query: 725  ETRDEQNEYEGSTRSKK-----TDAKPR---RAVKHVFERSS--------FEVHFKFTTE 594
            + +DE ++    ++S K     T+AK +   RA+K  F+R+         FEVHF+FT E
Sbjct: 1476 DPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1535

Query: 593  PHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADD 414
            PH+LLAQIAQK A KV+++ SG++  C+++  + D+      D   PK+ EN P  G + 
Sbjct: 1536 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD---PKKRENIP--GEEK 1590

Query: 413  ALYWAMKASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIY 234
                A++ +G DF +FW M ++LD+  +YSNNVHA+LNT+GVEAARAT+I+EV  VF+ Y
Sbjct: 1591 KKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAY 1650

Query: 233  GVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLAD 54
            GVK++ RHLSLIAD+MTH+GGYRPM+R G I+ES+SPF KM+FETASKFIVEAAS G+ D
Sbjct: 1651 GVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTD 1710

Query: 53   ELETPSSRICLGLPVKV 3
             LE+ S+RICLGLPVK+
Sbjct: 1711 NLESASARICLGLPVKM 1727


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  248 bits (634), Expect = 1e-63
 Identities = 130/236 (55%), Positives = 164/236 (69%), Gaps = 8/236 (3%)
 Frame = -1

Query: 686  RSKKTDAKPRRAVKHVFERS--------SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS 531
            + KK  AK +  +   F+R+         FEVHFKFT EPH+LLA+IAQKTA+KV+++  
Sbjct: 1443 KKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNP 1502

Query: 530  GEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 351
            G++ QCR+   D  E  VI+      +R + KP          A+ A+G DF +FW M +
Sbjct: 1503 GKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVP---ALHATGVDFNTFWKMQD 1557

Query: 350  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 171
             LD+  +YSNN+HA+L TYGVEAAR T+IRE+  VF  YG+ +  RHLSLIAD+MTHTGG
Sbjct: 1558 HLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGG 1617

Query: 170  YRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            YRPMSR G I+ES+SPF KMSFETASKFIVEAA  G  D LETPS+RICLGLPVK+
Sbjct: 1618 YRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKM 1673


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  243 bits (619), Expect = 6e-62
 Identities = 125/241 (51%), Positives = 170/241 (70%)
 Frame = -1

Query: 725  ETRDEQNEYEGSTRSKKTDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKV 546
            ET  E+ + +     K+TD    R++    + + FEVHFKFT EPH LL+QI Q+ AQKV
Sbjct: 1408 ETSKEKKKVKSELVRKETD----RSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKV 1463

Query: 545  FLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSF 366
             ++RSG++ QC+  Q    E  VI++     +R   KP+   +     A++ SG DFK+ 
Sbjct: 1464 SIQRSGKIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTL 1518

Query: 365  WNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYM 186
            W M ++LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYM
Sbjct: 1519 WEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYM 1578

Query: 185  THTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVK 6
            TH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSRICLGLPVK
Sbjct: 1579 THSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVK 1638

Query: 5    V 3
            +
Sbjct: 1639 M 1639


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  243 bits (619), Expect = 6e-62
 Identities = 125/241 (51%), Positives = 170/241 (70%)
 Frame = -1

Query: 725  ETRDEQNEYEGSTRSKKTDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKV 546
            ET  E+ + +     K+TD    R++    + + FEVHFKFT EPH LL+QI Q+ AQKV
Sbjct: 1406 ETSKEKKKVKSELVRKETD----RSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKV 1461

Query: 545  FLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSF 366
             ++RSG++ QC+  Q    E  VI++     +R   KP+   +     A++ SG DFK+ 
Sbjct: 1462 SIQRSGKIIQCQ--QITCKEGQVIYHGNNLKERKNLKPE---EKEKIPALQTSGVDFKTL 1516

Query: 365  WNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYM 186
            W M ++LD+  +YSN++HA+L TYGVEAARAT+IRE++ +F  YG+ ++ RHLSL+ADYM
Sbjct: 1517 WEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADYM 1576

Query: 185  THTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVK 6
            TH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+AA  G  D LETPSSRICLGLPVK
Sbjct: 1577 THSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPVK 1636

Query: 5    V 3
            +
Sbjct: 1637 M 1637


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  241 bits (615), Expect = 2e-61
 Identities = 124/250 (49%), Positives = 165/250 (66%), Gaps = 14/250 (5%)
 Frame = -1

Query: 710  QNEYEGSTRSKKTDAKPRR--------------AVKHVFERSSFEVHFKFTTEPHVLLAQ 573
            +N     +R +KT ++P+R              A+ +      FEVHFK   EPH+LLAQ
Sbjct: 1142 ENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQ 1201

Query: 572  IAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMK 393
            IA+KTA+KV+++  G++ QCR+     ++      D  K K   +K +  A       + 
Sbjct: 1202 IAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LH 1254

Query: 392  ASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYR 213
             +G DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ R
Sbjct: 1255 TTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIR 1314

Query: 212  HLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSS 33
            HL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSS
Sbjct: 1315 HLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSS 1374

Query: 32   RICLGLPVKV 3
            RICLGLPVK+
Sbjct: 1375 RICLGLPVKM 1384


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  241 bits (615), Expect = 2e-61
 Identities = 124/250 (49%), Positives = 165/250 (66%), Gaps = 14/250 (5%)
 Frame = -1

Query: 710  QNEYEGSTRSKKTDAKPRR--------------AVKHVFERSSFEVHFKFTTEPHVLLAQ 573
            +N     +R +KT ++P+R              A+ +      FEVHFK   EPH+LLAQ
Sbjct: 1145 ENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQ 1204

Query: 572  IAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMK 393
            IA+KTA+KV+++  G++ QCR+     ++      D  K K   +K +  A       + 
Sbjct: 1205 IAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LH 1257

Query: 392  ASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYR 213
             +G DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ R
Sbjct: 1258 TTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIR 1317

Query: 212  HLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSS 33
            HL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSS
Sbjct: 1318 HLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSS 1377

Query: 32   RICLGLPVKV 3
            RICLGLPVK+
Sbjct: 1378 RICLGLPVKM 1387


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  241 bits (615), Expect = 2e-61
 Identities = 124/250 (49%), Positives = 165/250 (66%), Gaps = 14/250 (5%)
 Frame = -1

Query: 710  QNEYEGSTRSKKTDAKPRR--------------AVKHVFERSSFEVHFKFTTEPHVLLAQ 573
            +N     +R +KT ++P+R              A+ +      FEVHFK   EPH+LLAQ
Sbjct: 1434 ENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQ 1493

Query: 572  IAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMK 393
            IA+KTA+KV+++  G++ QCR+     ++      D  K K   +K +  A       + 
Sbjct: 1494 IAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LH 1546

Query: 392  ASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYR 213
             +G DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ R
Sbjct: 1547 TTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIR 1606

Query: 212  HLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSS 33
            HL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSS
Sbjct: 1607 HLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSS 1666

Query: 32   RICLGLPVKV 3
            RICLGLPVK+
Sbjct: 1667 RICLGLPVKM 1676


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  241 bits (615), Expect = 2e-61
 Identities = 124/250 (49%), Positives = 165/250 (66%), Gaps = 14/250 (5%)
 Frame = -1

Query: 710  QNEYEGSTRSKKTDAKPRR--------------AVKHVFERSSFEVHFKFTTEPHVLLAQ 573
            +N     +R +KT ++P+R              A+ +      FEVHFK   EPH+LLAQ
Sbjct: 1410 ENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRGLCFEVHFKLKNEPHILLAQ 1469

Query: 572  IAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMK 393
            IA+KTA+KV+++  G++ QCR+     ++      D  K K   +K +  A       + 
Sbjct: 1470 IAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQA-------LH 1522

Query: 392  ASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYR 213
             +G DF +FW M + +D+  LYSN++HA+LNTYGVEAAR T+IRE+  VF  YG+ ++ R
Sbjct: 1523 TTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIR 1582

Query: 212  HLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSS 33
            HL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETASKFIVEAA  GL D LETPSS
Sbjct: 1583 HLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSS 1642

Query: 32   RICLGLPVKV 3
            RICLGLPVK+
Sbjct: 1643 RICLGLPVKM 1652


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  238 bits (607), Expect = 2e-60
 Identities = 123/236 (52%), Positives = 162/236 (68%), Gaps = 10/236 (4%)
 Frame = -1

Query: 680  KKTDAKPRRAVKHVFERSSF--------EVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGE 525
            KKT AK    V+  ++R++F        E+HFKFT EPH+LL QIAQKTA+ V++K SG 
Sbjct: 1430 KKTSAK---LVRKEYDRATFVSAKGFHFEIHFKFTNEPHILLDQIAQKTARNVYVKSSGN 1486

Query: 524  MSQCRLVQYDPDEKTVI--WNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 351
            +  C+ +    +E  V   WND      GE  P    ++    A++ +G DF + W + +
Sbjct: 1487 ILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSE--EEKKMRALQTAGVDFATLWKLQD 1544

Query: 350  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 171
            DLD++ +YSNN+HA+LNTYGVEAAR T+I+E+  VF +YG+ ++ RHL LIADYMT +G 
Sbjct: 1545 DLDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLLLIADYMTRSGS 1604

Query: 170  YRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            YRPM+R G I+ES SP  KMSFETASKFI EAA  G  D+LETPS+RICLGLPVKV
Sbjct: 1605 YRPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDLETPSARICLGLPVKV 1660


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  237 bits (604), Expect = 3e-60
 Identities = 125/232 (53%), Positives = 165/232 (71%)
 Frame = -1

Query: 698  EGSTRSKKTDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMS 519
            E +++S+    K  R V   FE+  FE+HFKFT EPH+LLAQIAQKTA+KV ++  G++ 
Sbjct: 1411 EENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVG 1470

Query: 518  QCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHEDLDL 339
            QC+ +     E  VI+      KR E  P +  +     A++ SG  FKSFW M +DL++
Sbjct: 1471 QCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQDDLNV 1525

Query: 338  SRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPM 159
              +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G YRPM
Sbjct: 1526 RYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPM 1585

Query: 158  SRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            SR GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+
Sbjct: 1586 SRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKM 1637


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  234 bits (596), Expect = 3e-59
 Identities = 121/238 (50%), Positives = 165/238 (69%)
 Frame = -1

Query: 716  DEQNEYEGSTRSKKTDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLK 537
            ++QN      +S+ T  K  RA+    +   FE+HF+FT EPH+LL QIAQ+TA+KV ++
Sbjct: 1406 EKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQ 1465

Query: 536  RSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNM 357
              G++ +C+ +     E  VI+      KR E    + ++     A++ SG  FK+FW +
Sbjct: 1466 NFGKVGECKAITCK--ESGVIYYGKDGRKRIEI---SASEKEQIPALQTSGVHFKTFWEL 1520

Query: 356  HEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHT 177
             +DLD+  +YSNNVHA+LN YGVEAAR T+IREV+ VF  YG+ ++ RHL+LIAD+MTHT
Sbjct: 1521 EDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHT 1580

Query: 176  GGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            G YRPM+R+GSI++S SPF+KM FETA  FIVEAA  G  D LETPS+RICLGLPVK+
Sbjct: 1581 GSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKM 1638


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  232 bits (591), Expect = 1e-58
 Identities = 125/242 (51%), Positives = 162/242 (66%), Gaps = 12/242 (4%)
 Frame = -1

Query: 692  STRSKKTDAKPRRA----VKHVFERS--------SFEVHFKFTTEPHVLLAQIAQKTAQK 549
            ST  KK  AK ++     VK  F+RS         FE+H KFT EPH+LLA+IAQKTA+K
Sbjct: 883  STEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKK 942

Query: 548  VFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKS 369
            V ++  G++ +C++   D  E  VI+      +R + +P    +     A+   G DF +
Sbjct: 943  VCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEP---GEKQKIPALHTIGVDFNT 997

Query: 368  FWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADY 189
            FW M + LD+  +YSN++H +L  YGVEAAR T+IRE+K VF+ YG+ ++ RHLSLIADY
Sbjct: 998  FWKMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADY 1057

Query: 188  MTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPV 9
            MTHTG YRPMSR G ISES+SP  KMSFETASKFIVEAA  G  D LE PS+R+CLGLPV
Sbjct: 1058 MTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPV 1117

Query: 8    KV 3
            K+
Sbjct: 1118 KM 1119


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  231 bits (590), Expect = 1e-58
 Identities = 125/236 (52%), Positives = 165/236 (69%), Gaps = 4/236 (1%)
 Frame = -1

Query: 698  EGSTRSKKTDAKPRRAVKHVFERSSFEVHFKFTTEPHVLLAQ----IAQKTAQKVFLKRS 531
            E +++S+    K  R V   FE+  FE+HFKFT EPH+LLAQ    IAQKTA+KV ++  
Sbjct: 1417 EENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQLLSTIAQKTAEKVCIQNF 1476

Query: 530  GEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMHE 351
            G++ QC+ +     E  VI+      KR E  P +  +     A++ SG  FKSFW M +
Sbjct: 1477 GKVGQCKAITCK--ESGVIYYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQD 1531

Query: 350  DLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGG 171
            DL++  +YSNNVHA+L+TYGVEAA+ T+IREV+ VF  YG+ ++ RHL LIAD+MTH+G 
Sbjct: 1532 DLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGC 1591

Query: 170  YRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGLPVKV 3
            YRPMSR GSI++S SPFLK+ FETAS FIVEAA  G  D L++PS+RICLGLPVK+
Sbjct: 1592 YRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKM 1647


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  230 bits (587), Expect = 3e-58
 Identities = 120/244 (49%), Positives = 165/244 (67%), Gaps = 5/244 (2%)
 Frame = -1

Query: 719  RDEQNEYEGSTRSKKTDAK-----PRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTA 555
            +  + + +  T+ KK  AK       RA+        FE HFKF  EP++LLAQIA+  A
Sbjct: 1464 KSSKKKSKSKTKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVA 1523

Query: 554  QKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDF 375
            +KV+++ SG++ QC++      E  VI+      KR + KP+   +     A+  +G DF
Sbjct: 1524 KKVYIQSSGKIDQCQVTNCK--ESQVIYYGKDPKKREDIKPE---EKEKVQALHTTGVDF 1578

Query: 374  KSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIA 195
             +FW + + +D+  +YSNN+ A+L TYGVEAAR T+IRE+K VF  YG+ ++ RHLSLIA
Sbjct: 1579 HAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIA 1638

Query: 194  DYMTHTGGYRPMSRSGSISESLSPFLKMSFETASKFIVEAASMGLADELETPSSRICLGL 15
            D+MTH+GGYRPMSR G I+ES+SPF KM+FE ASKFIVEAAS G  D+L+TPS+RICLGL
Sbjct: 1639 DFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDKLDTPSARICLGL 1698

Query: 14   PVKV 3
            PVK+
Sbjct: 1699 PVKM 1702


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  230 bits (586), Expect = 4e-58
 Identities = 115/209 (55%), Positives = 152/209 (72%), Gaps = 2/209 (0%)
 Frame = -1

Query: 623  FEVHFKFT-TEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKR 447
            FEVHF+F   EPH+LL+QIAQKTAQKV+++RSG+++ C+ +  D ++      D      
Sbjct: 1392 FEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCDENQVLCFGKDP----- 1446

Query: 446  GENKPQTGADDALYW-AMKASGTDFKSFWNMHEDLDLSRLYSNNVHAVLNTYGVEAARAT 270
             ENK    + +     A++ +G DF +FW + + LD+  +YSNN+HA+LNTYGVEAAR T
Sbjct: 1447 -ENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYGVEAARET 1505

Query: 269  LIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRSGSISESLSPFLKMSFETASK 90
            +IRE+  VF  YG+ ++ RHL+LIAD+MTH GGYRP++R G I ES+SPF KM+FETASK
Sbjct: 1506 IIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKMTFETASK 1565

Query: 89   FIVEAASMGLADELETPSSRICLGLPVKV 3
            FIVEAA  G  D LETPS+RICLGLPV V
Sbjct: 1566 FIVEAAYHGQVDRLETPSARICLGLPVNV 1594