BLASTX nr result
ID: Mentha23_contig00008944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00008944
(646 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22375.3| unnamed protein product [Vitis vinifera] 235 1e-59
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 235 1e-59
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 233 3e-59
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 228 1e-57
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam... 227 2e-57
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 227 2e-57
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 211 2e-52
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 206 4e-51
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 200 4e-49
gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlise... 199 5e-49
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 199 8e-49
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 197 2e-48
ref|XP_007144014.1| hypothetical protein PHAVU_007G121900g [Phas... 194 2e-47
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 191 1e-46
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi... 189 6e-46
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 185 9e-45
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 185 1e-44
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 184 2e-44
ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containi... 184 2e-44
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 183 3e-44
>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 235 bits (599), Expect = 1e-59
Identities = 114/199 (57%), Positives = 146/199 (73%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHL 215
T + +FFP+ F Q T H++S+ CR+ + N RN V VS EARP HL
Sbjct: 2 TIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61
Query: 216 PTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVE 395
+Y DF+E H +KLL+RSCKAG ++E LYFL+C+VN GY DVILCTKLIKGFF+ KN+E
Sbjct: 62 QSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 120
Query: 396 KAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIG 575
KA++ M ILE + EPD++AYNA +SG CK N I++A QVL+RM+ RGF PDIVTYNIMIG
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 576 SLCNRGKLSLALKMMEDLI 632
SLCNR KL LALK+++ L+
Sbjct: 181 SLCNRRKLGLALKVLDQLL 199
Score = 69.7 bits (169), Expect = 7e-10
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRIL-ERY 431
++ CK G +DEG + M + G + + + + LI +++A ++++ E+
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S LCK +D A ++ M G PDIV YN ++ +LC G + AL
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 367
Query: 612 KMMEDL 629
++ L
Sbjct: 368 EIFNKL 373
Score = 68.9 bits (167), Expect = 1e-09
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +3
Query: 342 VILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDIYAYNAFVSGLCKANMIDSANQVLS 518
VI T LI+ + +A K + +L R PD+Y YNA + G+CK M D ++++
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVA 266
Query: 519 RMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
M RG P+ VTY+I+I SLC G++ A+ +++ +IE++
Sbjct: 267 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Score = 58.5 bits (140), Expect = 2e-06
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
L+ + G +E + L+ M+ G D+ +I+G ++ K + + R
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRG 272
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP+ Y+ +S LC+ ID A VL M + PD +Y+ +I +LC G+L LA+
Sbjct: 273 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 332
Query: 612 KMMEDLI 632
+M+ +I
Sbjct: 333 GIMDYMI 339
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 235 bits (599), Expect = 1e-59
Identities = 114/199 (57%), Positives = 146/199 (73%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHL 215
T + +FFP+ F Q T H++S+ CR+ + N RN V VS EARP HL
Sbjct: 2 TIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61
Query: 216 PTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVE 395
+Y DF+E H +KLL+RSCKAG ++E LYFL+C+VN GY DVILCTKLIKGFF+ KN+E
Sbjct: 62 QSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 120
Query: 396 KAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIG 575
KA++ M ILE + EPD++AYNA +SG CK N I++A QVL+RM+ RGF PDIVTYNIMIG
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 576 SLCNRGKLSLALKMMEDLI 632
SLCNR KL LALK+++ L+
Sbjct: 181 SLCNRRKLGLALKVLDQLL 199
Score = 66.2 bits (160), Expect = 8e-09
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRIL-ERY 431
LL G +DEG + M + G + + + + LI +++A ++++ E+
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S LCK +D A ++ M G PDIV YN ++ +LC G + AL
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402
Query: 612 KMMEDL 629
++ L
Sbjct: 403 EIFNKL 408
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ + G +E + L+ M+ G D+ +I+G VE+AA+ + L G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD+ +YN + D ++++ M RG P+ VTY+I+I SLC G++ A+
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 612 KMMEDLIEED 641
+++ +IE++
Sbjct: 333 SVLKVMIEKE 342
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G + + + + G K DVI L++ F + ++ K + + R
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP+ Y+ +S LC+ ID A VL M + PD +Y+ +I +LC G+L LA+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
Query: 612 KMMEDLI 632
+M+ +I
Sbjct: 368 GIMDYMI 374
Score = 63.5 bits (153), Expect = 5e-08
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 342 VILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDIYAYNAFVSGLCKANMIDSANQVLS 518
VI T LI+ + +A K + +L R PD+Y YNA + G+CK M++ A ++++
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266
Query: 519 RMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDL 629
+ +G PD+++YNI++ + N+GK K++ ++
Sbjct: 267 SLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Score = 60.5 bits (145), Expect = 4e-07
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
+L CK GN ++ L + +G +V +I +S + +A + + G
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD YN+ +S LC+ +++ A +L M GF P +++YNI++ LC ++ A+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 612 KMMEDLIEE 638
M ++IE+
Sbjct: 508 GMFAEMIEK 516
Score = 60.1 bits (144), Expect = 6e-07
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G DE + L+ M+ D LI ++ A M + G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN ++ LCK + A ++ +++RG G P++ +YN MI +L + G S AL
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437
Query: 612 KMMEDLIEE 638
M+ +I +
Sbjct: 438 GMVPAMISK 446
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 233 bits (595), Expect = 3e-59
Identities = 115/208 (55%), Positives = 148/208 (71%)
Frame = +3
Query: 9 TVKNWELMTTTFCAEFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKV 188
T N + T + +FFP F+ Q T H++S+ CR+ + N RN V V
Sbjct: 3 TQHNAGSLMTIYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGV 62
Query: 189 STEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIK 368
S EARP HL +Y DF+E H +KLL+RSCKAG ++E LYFL+C+VN GY DVILCTKLIK
Sbjct: 63 SAEARPAHLQSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIK 121
Query: 369 GFFSSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPD 548
GFF+ KN+EKA++ M ILE + EPD++AYNA +SG CK N I++A QVL+RM+ RGF PD
Sbjct: 122 GFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPD 181
Query: 549 IVTYNIMIGSLCNRGKLSLALKMMEDLI 632
IVTYNIMIGSLCNR KL LAL +++ L+
Sbjct: 182 IVTYNIMIGSLCNRRKLGLALTVLDQLL 209
Score = 66.6 bits (161), Expect = 6e-09
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ + G +E + L+ M+ G D+ +I+G VE+AA+ + L G
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EPD+ +YN + D ++++ M RG P+ VTY+I+I SLC G++ A+
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 612 KMMEDLIEED 641
+++ +IE++
Sbjct: 343 SVLKVMIEKE 352
Score = 66.2 bits (160), Expect = 8e-09
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRIL-ERY 431
LL G +DEG + M + G + + + + LI +++A ++++ E+
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S LCK +D A ++ M G PDIV YN ++ +LC G + AL
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412
Query: 612 KMMEDL 629
++ L
Sbjct: 413 EIFNKL 418
Score = 63.5 bits (153), Expect = 5e-08
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 342 VILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDIYAYNAFVSGLCKANMIDSANQVLS 518
VI T LI+ + +A K + +L R PD+Y YNA + G+CK M++ A ++++
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 519 RMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDL 629
+ +G PD+++YNI++ + N+GK K++ ++
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Score = 63.2 bits (152), Expect = 7e-08
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G + + + + G + DVI L++ F + ++ K + + R
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP+ Y+ +S LC+ ID A VL M + PD +Y+ +I +LC G+L LA+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
Query: 612 KMMEDLI 632
+M+ +I
Sbjct: 378 GIMDYMI 384
Score = 60.5 bits (145), Expect = 4e-07
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
+L CK GN ++ L + +G +V +I +S + +A + + G
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD YN+ +S LC+ +++ A +L M GF P +++YNI++ LC ++ A+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 612 KMMEDLIEE 638
M ++IE+
Sbjct: 518 GMFAEMIEK 526
Score = 60.1 bits (144), Expect = 6e-07
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G DE + L+ M+ D LI ++ A M + G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN ++ LCK + A ++ +++RG G P++ +YN MI +L + G S AL
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447
Query: 612 KMMEDLIEE 638
M+ +I +
Sbjct: 448 GMVPAMISK 456
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 228 bits (581), Expect = 1e-57
Identities = 111/201 (55%), Positives = 145/201 (72%), Gaps = 4/201 (1%)
Frame = +3
Query: 51 EFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNLEG----VKVSTEARPNHLP 218
E P T Q T H+ + CR++ S I+N RN V VS E + L
Sbjct: 7 ELLPHSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPTRVSVSAEPKSTQLQ 66
Query: 219 TYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEK 398
Y DFK+ H +K+L+RSCKAG Y+E +YFL+ MVN GYK DVILCTKLIKGFF+S+N+EK
Sbjct: 67 NY-DFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKGFFNSRNIEK 125
Query: 399 AAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGS 578
A + M+ILE+YGEPD++AYNA +SG CKAN I+SAN+VL RM+ +GF PD+VTYNIMIGS
Sbjct: 126 AIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNIMIGS 185
Query: 579 LCNRGKLSLALKMMEDLIEED 641
LC+RGKL LAL++M+ L+ ++
Sbjct: 186 LCSRGKLGLALQVMDRLVRDN 206
Score = 69.7 bits (169), Expect = 7e-10
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G L + +V K VI T LI+ + +A K + +L R +PD+
Sbjct: 187 CSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDM 246
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGK 596
Y YNA V G+C+ M+D A + + +G AP++++YNI++ +L NRGK
Sbjct: 247 YTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGK 296
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++EG + M G + +V+ + LI VE ++I++ G
Sbjct: 287 LLRALLNRGKWEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKG 346
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A ++L M G PDIV YN ++ +LC G AL
Sbjct: 347 LTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQAL 406
Query: 612 KMMEDLIE 635
++ E+L E
Sbjct: 407 EIFENLGE 414
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C+ G D F++C G +VI L++ + E+ + + R EP++
Sbjct: 257 CREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVANMCARGCEPNV 316
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
Y+ +S LC+ ++ VL M+ +G PD +Y+ +I C G+L LA+++++
Sbjct: 317 VTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIELLDC 376
Query: 627 LIEE 638
+I +
Sbjct: 377 MISD 380
Score = 57.0 bits (136), Expect = 5e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G ++G+ L+ M G D LI F ++ A + + + G
Sbjct: 322 LISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDG 381
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN ++ LCK D A ++ + G P++ +YN M +L N G AL
Sbjct: 382 CLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRAL 441
Query: 612 KMMEDLIEE 638
M+ D++ +
Sbjct: 442 GMVSDMVSK 450
>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 586
Score = 227 bits (579), Expect = 2e-57
Identities = 109/206 (52%), Positives = 146/206 (70%), Gaps = 4/206 (1%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKL---GTRKPHYSSVFRCRSNR-ESKITNPRNLEGVKVSTEAR 203
T F E L FT Q+L H++S+ C ++ + + RN + V+VS E R
Sbjct: 2 TLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETR 61
Query: 204 PNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSS 383
P HL ++ DFKE H +KLL+RSCKAG Y+E YFL+CMV GYK DV+LCTK+IKGFF+
Sbjct: 62 PTHLLSF-DFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNG 120
Query: 384 KNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYN 563
+NVEKA + + ILE+YGEPD++AYNA +SG CK N +D AN+VL RMR RGF+PD+VTYN
Sbjct: 121 RNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYN 180
Query: 564 IMIGSLCNRGKLSLALKMMEDLIEED 641
IMIGS C+RGKL A K++ L++++
Sbjct: 181 IMIGSFCSRGKLDSAYKVINQLLKDN 206
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G + EG + MV+ G + +V+ + LI +E+A +++++ G
Sbjct: 287 LLRVLLNQGKWAEGEKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERG 346
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A + L M G PDIV YN ++ +LC GK AL
Sbjct: 347 LTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQAL 406
Query: 612 KMMEDLIE 635
++ E L E
Sbjct: 407 EIFEKLRE 414
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G D + ++ K VI T LI+ + +A K + +L + PD+
Sbjct: 187 CSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDM 246
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ YNA + G+CK M++ A + + ++ RG PD+++YNI++ L N+GK + K++ +
Sbjct: 247 FTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTE 306
Query: 627 LI 632
++
Sbjct: 307 MV 308
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G + F++ + G + DVI L++ + + K + ++ R
Sbjct: 252 IIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRG 311
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP++ Y+ +S LC+ ++ A VL M+ RG PD +Y+ +I + C G+L LA+
Sbjct: 312 CEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAI 371
Query: 612 KMMEDLIEE 638
+ ++ +I +
Sbjct: 372 EFLDCMISD 380
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
CK G ++ L + + +G +V + +SS + KA + + +L + PD
Sbjct: 397 CKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDE 456
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YN+ +S LC+ M+D A ++L M G P +++YNI++ LC +++ A++++
Sbjct: 457 ITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAA 516
Query: 627 LIEE 638
++++
Sbjct: 517 MVDK 520
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 227 bits (579), Expect = 2e-57
Identities = 109/203 (53%), Positives = 148/203 (72%), Gaps = 1/203 (0%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKLG-TRKPHYSSVFRCRSNRESKITNPRNLEGVKVSTEARPNH 212
T F EF P ++FT Q L T +S++ C + RN + V+VS E R H
Sbjct: 2 TLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTH 61
Query: 213 LPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNV 392
+ ++ DFKE H +KLL+RSC+AG Y+E LYFL+CMV+ GY DVILCTKLIKGFF+S+N+
Sbjct: 62 VLSF-DFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNI 120
Query: 393 EKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMI 572
KA + M ILERYG+PD++AYNA +SG KAN +++AN+VL RM+ RGF PD+VTYNIMI
Sbjct: 121 GKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMI 180
Query: 573 GSLCNRGKLSLALKMMEDLIEED 641
GS C+RGKL LAL++ E+L++++
Sbjct: 181 GSFCSRGKLDLALEIFEELLKDN 203
Score = 75.9 bits (185), Expect = 1e-11
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G + EG + M+++G K +V+ + LI VE+A +R ++ G
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD Y Y+ ++G C+ +D A + L M G PDIV YN ++ LC GK AL
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403
Query: 612 KMMEDLIE 635
++ E L E
Sbjct: 404 EVFEKLDE 411
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G D L + ++ + VI T LI+ ++ A K + +L + EPD
Sbjct: 184 CSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDT 243
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YNA + G+CK M+D A ++L + RG PDI+TYNI++ +L +RGK S K++ +
Sbjct: 244 LTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISE 303
Query: 627 LI 632
+I
Sbjct: 304 MI 305
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ + G D + L M++ G + D + +I+G V+KA + +R L G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PDI YN + L +++S M G P++VT++I+IG+LC GK+ A+
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333
Query: 612 KMMEDLIEE 638
++ + E+
Sbjct: 334 NLLRSMKEK 342
Score = 60.8 bits (146), Expect = 3e-07
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G +E + L+ M G K D LI GF ++ A + + + G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN ++GLC+ D A +V ++ G P++ +YN + +L + G AL
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438
Query: 612 KMMEDLIEE 638
+M+ L+ +
Sbjct: 439 EMILKLLNQ 447
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/124 (25%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKA-MRILERYGEPDI 446
C+ G D+ L + + +G +V L +SS + +A + +++L + +PD
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YN+ +S LC+ M+D A ++L M+ + P++V+YNI++ LC + + A++++
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513
Query: 627 LIEE 638
+ E+
Sbjct: 514 MTEK 517
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
++ CK D+ L+ + + G K D+I L++ S + K + + G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+P++ ++ + LC+ ++ A +L M+ +G PD Y+ +I C G+L LA
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368
Query: 612 KMMEDLIEE 638
+ +E +I +
Sbjct: 369 EFLEYMISD 377
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 211 bits (537), Expect = 2e-52
Identities = 105/199 (52%), Positives = 140/199 (70%)
Frame = +3
Query: 42 FCAEFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHLPT 221
F +EF PQ L FT P R S + +N +L V S E R H P
Sbjct: 2 FSSEFLPQSLHFTNPLAKPTIPQS----RSDSIPACRFSNKTHLRNVTSSAEFRQPHFPN 57
Query: 222 YHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKA 401
D ++AH +KLL+RSC+AG ++E LYFL+ +V+ G+K DV+LCTKLIKGFF+S+N++KA
Sbjct: 58 L-DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA 116
Query: 402 AKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSL 581
+ M ILE YG+PD+Y+YNA +SG KAN IDSANQV RMR RGF+PD+VTYNIMIGSL
Sbjct: 117 MRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSL 176
Query: 582 CNRGKLSLALKMMEDLIEE 638
C+RGKL LA ++M++L+++
Sbjct: 177 CSRGKLELAFEVMDELLKD 195
Score = 70.1 bits (170), Expect = 5e-10
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL +++G ++ MV G + +V+ + LI F V +A + +++ G
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A + L +M G PDIV YN ++ +LC G LAL
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLAL 396
Query: 612 KMMEDLIE 635
+ E L E
Sbjct: 397 DVFEKLDE 404
Score = 68.2 bits (165), Expect = 2e-09
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Frame = +3
Query: 144 ESKITNPRNLEGVKVSTEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVN 323
E +I L VS RP+ L TY+ ++ CK G D L F++ +
Sbjct: 214 EGRINEALELFDELVSRGLRPD-LYTYN--------AIIRGICKEGMEDRALDFVRHLSA 264
Query: 324 LGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDIYAYNAFVSGLCKANMIDS 500
G DV+ L++ F + E + M+ + G EP++ ++ +S C+ +
Sbjct: 265 RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVRE 324
Query: 501 ANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEE 638
A VL M+ +G PD +Y+ +I + C G+L LA++ +E ++ +
Sbjct: 325 AVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSD 370
Score = 67.0 bits (162), Expect = 5e-09
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G + + ++ G K VI T LI+ + +A + ++ R PD+
Sbjct: 177 CSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDL 236
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
Y YNA + G+CK M D A + + RG PD+V+YNI++ S N+ + ++M+D
Sbjct: 237 YTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKD 296
Query: 627 LI 632
++
Sbjct: 297 MV 298
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 206 bits (525), Expect = 4e-51
Identities = 98/181 (54%), Positives = 138/181 (76%), Gaps = 4/181 (2%)
Frame = +3
Query: 114 SSVFRC----RSNRESKITNPRNLEGVKVSTEARPNHLPTYHDFKEAHFLKLLHRSCKAG 281
S+V C ++ S + NP L +V E +P H+ +Y DFKE H +KLL+RSCKAG
Sbjct: 31 SNVVSCINPTHNDTNSNLGNPPKLR--RVLPETKPTHVLSY-DFKETHLMKLLNRSCKAG 87
Query: 282 NYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYGEPDIYAYNA 461
+E LYFL+CMV GY+ DVI+CTKLIKGFF+S+N+EKA + M ILE++GEPD++AYNA
Sbjct: 88 KCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSRNIEKATRVMEILEKHGEPDVFAYNA 147
Query: 462 FVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
+SG CKAN I+SA +VL RM+ +GF+ D+VTYNIMIG+ C++GK+ LALK+ E+L++++
Sbjct: 148 VISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKGKIDLALKVFEELLKDN 207
Query: 642 S 644
+
Sbjct: 208 N 208
Score = 63.5 bits (153), Expect = 5e-08
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G + EG + M + G + +V+ + LI +E++ +++++ G
Sbjct: 289 LLRALLDQGKWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 348
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y Y+ ++ C+ +D A + L M GF PDIV YN ++ +LC G A+
Sbjct: 349 LTPDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAV 408
Query: 612 KMMEDLIE 635
++ L E
Sbjct: 409 EIFGKLEE 416
Score = 62.8 bits (151), Expect = 9e-08
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +3
Query: 270 CKAGNYDEGL-YFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPD 443
C G D L F + + + K +I T LI+ +++ K + +L R EPD
Sbjct: 188 CSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPD 247
Query: 444 IYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMME 623
+ YN V GL K ++ A +++ + RG PD++TYNI++ +L ++GK K+M+
Sbjct: 248 TFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMD 307
Query: 624 DL 629
++
Sbjct: 308 EM 309
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Frame = +3
Query: 273 KAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDIY 449
K G ++ ++ + + G K DVI L++ + K M + R EP++
Sbjct: 260 KEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPNVV 319
Query: 450 AYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDL 629
Y+ +S LC+ I+ + ++ M+ +G PD Y+ +I + C GKL +A+K ++ +
Sbjct: 320 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLDYM 379
Query: 630 IEE 638
I +
Sbjct: 380 ISD 382
Score = 57.0 bits (136), Expect = 5e-06
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDI 446
CK GN D + + +G +V ++ + S + +A + + G +PD
Sbjct: 399 CKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDG 458
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YN+ +S LC+ M+D A +L+ M F P+IV+YNI++ LC ++ A++++
Sbjct: 459 ITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTA 518
Query: 627 LIE 635
+IE
Sbjct: 519 MIE 521
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 200 bits (508), Expect = 4e-49
Identities = 95/201 (47%), Positives = 143/201 (71%), Gaps = 4/201 (1%)
Frame = +3
Query: 51 EFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESK--ITNPRNLEG--VKVSTEARPNHLP 218
EF PQ L F+ Q + CR+ +S I +N + V+VS E + +
Sbjct: 7 EFLPQTLPFSPQPKQHTSRQSHTCLSCRNPSQSSTDIYRKKNKKPLRVRVSVETKSPNSQ 66
Query: 219 TYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEK 398
+ DF E+H LK+++RSCK+G Y+E LYFL+ MV+ G+K DVILCTK+++GFF+S+N+ K
Sbjct: 67 SNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPK 126
Query: 399 AAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGS 578
A + M ILE++GEPD+++YNA +SG CKAN ++ AN+VL RMR +GF+PD +TYNIMIGS
Sbjct: 127 AIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGS 186
Query: 579 LCNRGKLSLALKMMEDLIEED 641
LC+RGK+ +A K++++L+ ++
Sbjct: 187 LCSRGKVDMAFKVLDELLRDN 207
Score = 76.6 bits (187), Expect = 6e-12
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDI 446
C G D L ++ K VI T LI+ S V+KA + + +L R PD+
Sbjct: 188 CSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDM 247
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ YNA V G+C+ M+D A + + + +G +P++++YNI++ +L NRGK S K++ D
Sbjct: 248 FTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSD 307
Query: 627 LI 632
++
Sbjct: 308 MV 309
Score = 69.3 bits (168), Expect = 9e-10
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G + +G L MV+ G + +V+ + LI VE A ++ ++ G
Sbjct: 288 LLRALLNRGKWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKG 347
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A + + M G PDIV YN ++ +LC G AL
Sbjct: 348 ITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHAL 407
Query: 612 KMMEDLIE 635
++ E L E
Sbjct: 408 EIFEKLGE 415
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDI 446
C+ G D F++ + G +VI L++ + K + ++ R EP++
Sbjct: 258 CREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNV 317
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
Y+ +S LC+ ++ A VL M+ +G PD +Y+ +I + C G+L LA++ M+
Sbjct: 318 VTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDY 377
Query: 627 LIEEDS 644
+I + S
Sbjct: 378 MISDGS 383
Score = 57.8 bits (138), Expect = 3e-06
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G ++ + L+ M G D LI F ++ A + M + G
Sbjct: 323 LISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDG 382
Query: 435 E-PDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN ++ LCK D A ++ ++ G P + +YN M +L N G+ AL
Sbjct: 383 SLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKAL 442
Query: 612 KMMEDLIEE 638
+M+ +++ +
Sbjct: 443 EMISEMVSK 451
>gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlisea aurea]
Length = 515
Score = 199 bits (507), Expect = 5e-49
Identities = 91/137 (66%), Positives = 116/137 (84%)
Frame = +3
Query: 228 DFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAK 407
DF E FLKLL RSCK+GNYDEGLYFL+ +V+LG++AD +LCTKL+KGF SSK+V+KA +
Sbjct: 1 DFNETRFLKLLKRSCKSGNYDEGLYFLEKLVSLGFRADAVLCTKLVKGFLSSKSVDKAVR 60
Query: 408 AMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCN 587
M ILER+GEPD+YAYNA ++GLCKA ID+A VL+ MR RG +PD+VTYNI+IGSLC+
Sbjct: 61 VMGILERHGEPDVYAYNAVINGLCKAGRIDAAKGVLNAMRNRGISPDVVTYNILIGSLCS 120
Query: 588 RGKLSLALKMMEDLIEE 638
RGKLS A+KM++ L E+
Sbjct: 121 RGKLSSAMKMLDQLTED 137
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGY-KADVILCTKLIKGFFSSKNVEKAAKAMRILERY 431
L+ C G + L + + + V+ T LI+ +E A K + +
Sbjct: 114 LIGSLCSRGKLSSAMKMLDQLTEDRFCRPTVVTYTILIEATIRETGIEGAVKVLEQMSSR 173
Query: 432 G-EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLA 608
G PD+Y YN + G+C+ ++ A++ +S ++G G PD+VTYN+++ + NR +
Sbjct: 174 GLRPDMYTYNTVIRGMCREGLVSEASEFVSSLKGSGIEPDVVTYNVLLRAFLNRDEWDDG 233
Query: 609 LKMMEDL 629
K++ ++
Sbjct: 234 EKVLSEM 240
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C+ G E F+ + G + DV+ L++ F + + K + + P++
Sbjct: 190 CREGLVSEASEFVSSLKGSGIEPDVVTYNVLLRAFLNRDEWDDGEKVLSEMFSSKCRPNV 249
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
++ VS LC+ +++ A +L M G+ PD TY+ ++ LC G++ A+ +M+
Sbjct: 250 VTFSIIVSHLCRYGLLEEAIGLLKLMIDEGYTPDSYTYDPLVSGLCREGRIDAAIGLMDH 309
Query: 627 LI 632
+I
Sbjct: 310 MI 311
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 199 bits (505), Expect = 8e-49
Identities = 100/211 (47%), Positives = 141/211 (66%), Gaps = 9/211 (4%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKLGTRKPHY----SSVF-----RCRSNRESKITNPRNLEGVKV 188
TTF EF L F KP+ SS+ +N+ + TN + +V
Sbjct: 2 TTFSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFRV 61
Query: 189 STEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIK 368
+ E +P +DF++ +F+K L+RSCK+ YDE LYFLQ MVN GYK DVILCTKLIK
Sbjct: 62 N-ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIK 120
Query: 369 GFFSSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPD 548
GFF+ K +EKA + M ILE++G+PD++AYNA +SG CKA+ +D A++VL RM+ RGF PD
Sbjct: 121 GFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPD 180
Query: 549 IVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
+VTYNI+IG+ C RG+L LAL++M+ L++++
Sbjct: 181 VVTYNILIGNFCGRGRLDLALRVMDQLLKDN 211
Score = 73.2 bits (178), Expect = 6e-11
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
L+ C G D L + ++ K VI T LI+ + +++A K + +L R
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y YN V+G+CK M+D A + LSR+ G + TYNI++ L N GK
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306
Query: 612 KMMEDLI 632
K+M D++
Sbjct: 307 KLMSDML 313
Score = 66.2 bits (160), Expect = 8e-09
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMR-ILERYGEPDI 446
CK G D FL + G A V L++ + E K M +L + EP+
Sbjct: 262 CKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNP 321
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
Y+ ++ LC+ ID A VL M+ + APD +Y+ +I +LC GK+ LA++ ++D
Sbjct: 322 ITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDD 381
Query: 627 LI 632
+I
Sbjct: 382 MI 383
Score = 63.2 bits (152), Expect = 7e-08
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRIL-ERY 431
LL G ++ G + M+ G + + I + LI +++A ++++ E+
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S LC+ +D A + L M G PDI++YN ++ SLC G AL
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411
Query: 612 KMMEDLIE 635
+ E L E
Sbjct: 412 NIFEKLGE 419
Score = 58.5 bits (140), Expect = 2e-06
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G D + FL M++ G+ D++ ++ + N ++A + I E+ G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEA---LNIFEKLG 418
Query: 435 E----PDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLS 602
E P+ +YN L + A ++ M G PD +TYN +I LC G +
Sbjct: 419 EVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVD 478
Query: 603 LALKMMEDLIEED 641
A++++ D+ E +
Sbjct: 479 QAIELLVDMFESE 491
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 197 bits (501), Expect = 2e-48
Identities = 108/208 (51%), Positives = 142/208 (68%), Gaps = 3/208 (1%)
Frame = +3
Query: 30 MTTTFCAEFFPQGLTFTRQ-KLGTRKPHYSSVFRCRS--NRESKITNPRNLEGVKVSTEA 200
MT AE FPQ F+ K ++ ++ V RC S N +SK+ RN VK+S+E
Sbjct: 1 MTRIIPAEIFPQCPFFSNNLKPKSQSSKHNFVVRCSSSSNDQSKVKT-RNPLRVKISSE- 58
Query: 201 RPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFS 380
N+ PT H +K+L+ SCK G YDE LY L+C + GYK DVILCTKLIKGF +
Sbjct: 59 --NYRPT-------HDMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCN 109
Query: 381 SKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTY 560
SKN +K K M+ILE++GEPD++AYNA +SG CK N I+ AN+VL+RM+ RGF PD VTY
Sbjct: 110 SKNSDKGVKVMQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTY 169
Query: 561 NIMIGSLCNRGKLSLALKMMEDLIEEDS 644
NI+IGSLC+RGKL ALK+++ L EE++
Sbjct: 170 NILIGSLCDRGKLGSALKLLDQLKEENN 197
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
+L CK G DE + + + +G DV L+ +++ +A K + ++E+
Sbjct: 384 ILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKG 443
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD YNA +S LC+ M++ A +L M G GF P ++TYNI++ LC ++ A+
Sbjct: 444 VDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAI 503
Query: 612 KMMEDLIEE 638
+++ +++E+
Sbjct: 504 EVLAEMVEK 512
Score = 74.3 bits (181), Expect = 3e-11
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 111 YSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYD 290
Y+ + R + + K ++ L +S PN + TY L+ C+ G D
Sbjct: 275 YNILLRALLHHKGKWSDGEKLMNEMLSAGCEPN-VVTYSI--------LMSALCRDGKLD 325
Query: 291 EGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDIYAYNAFV 467
E + L+ M++ G D LI F ++ A K + + G PDI YN +
Sbjct: 326 EAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTIL 385
Query: 468 SGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEE 638
S +CK D A +V ++ G PD+ TYN ++ +L N G + ALKM+ ++IE+
Sbjct: 386 STMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEK 442
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFL-QCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILER 428
L+ C G L L Q K VI T LI+ + +A K + +L R
Sbjct: 172 LIGSLCDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSR 231
Query: 429 YGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLC-NRGKLSL 605
+PD+Y YNA + G+C+ M+D A + + + +G PD+++YNI++ +L ++GK S
Sbjct: 232 GLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSD 291
Query: 606 ALKMMEDLI 632
K+M +++
Sbjct: 292 GEKLMNEML 300
>ref|XP_007144014.1| hypothetical protein PHAVU_007G121900g [Phaseolus vulgaris]
gi|561017204|gb|ESW16008.1| hypothetical protein
PHAVU_007G121900g [Phaseolus vulgaris]
Length = 570
Score = 194 bits (493), Expect = 2e-47
Identities = 97/208 (46%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Frame = +3
Query: 36 TTFCAEFFPQGLTFTRQKLGTRKPHYSSVFRCR------SNRESKITNPRNLEGVKVSTE 197
TT EF L+ G P ++V CR N + N G S++
Sbjct: 2 TTVSTEFLSHTLSLRTNSKGAWHPKPNTVITCRIPVLNEDNPSKRKNNYNKGNGRVSSSD 61
Query: 198 ARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFF 377
RP H +DF++ H ++ L+R C+ G Y E LYFL+ MV GYK DVILCTKLIKG F
Sbjct: 62 TRPRH----YDFRDTHHMRALNRLCRTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLF 117
Query: 378 SSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVT 557
+SK EKA + M ILE++G+PD +AYNA +SG C+++ D+AN VL RM+ RGF+PD+VT
Sbjct: 118 TSKKTEKAVQVMEILEQHGDPDAFAYNAVISGFCRSDRFDAANGVLLRMKNRGFSPDVVT 177
Query: 558 YNIMIGSLCNRGKLSLALKMMEDLIEED 641
YNI+IGSLC RGKL LA+K+M+ L++++
Sbjct: 178 YNILIGSLCARGKLDLAMKVMDQLMKDN 205
Score = 63.2 bits (152), Expect = 7e-08
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +3
Query: 279 GNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDIYAY 455
G + G + M+ G + +V+ + LI +A +++++ G PD Y Y
Sbjct: 291 GRWKTGERLMSDMMVKGCEPNVVTYSVLINSLCRDGKTGEAVDLLKVMKEKGLSPDAYCY 350
Query: 456 NAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIE 635
+ +S CK +D A + M G+ PDI+ YN ++GSLC +G+ AL + + L E
Sbjct: 351 DPLISAFCKEGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLCKKGRGDEALSIFKKLDE 410
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 191 bits (486), Expect = 1e-46
Identities = 96/176 (54%), Positives = 123/176 (69%)
Frame = +3
Query: 111 YSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYD 290
++ V RC + E N RN + VK+S+E R +H +K+L+ SCK G YD
Sbjct: 26 HNFVVRCSISNEESRVNIRNPQRVKISSENRGSH-----------DMKVLNWSCKVGKYD 74
Query: 291 EGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYGEPDIYAYNAFVS 470
E LY L+C V GYK DVILCTKLIKGFF+SKN +K K M+ILE++GEPD++AYNA VS
Sbjct: 75 ETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVKVMQILEQFGEPDVFAYNALVS 134
Query: 471 GLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEE 638
G CK N I+ AN+VL+RM+ GF PD VTYNI+IGSLC+RGKL AL +++ L EE
Sbjct: 135 GFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGKLGSALMLLDQLKEE 190
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
+L CK G DE + + + +G DV L+ +++ +A K + ++E+
Sbjct: 379 ILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKG 438
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD YNA +S LC+ M++ A +L M G GF P ++TYNI++ LC ++ A+
Sbjct: 439 VDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAI 498
Query: 612 KMMEDLIEE 638
+++ +++E+
Sbjct: 499 EVLAEMVEK 507
Score = 74.7 bits (182), Expect = 2e-11
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ C+ G DE + L+ MV+ G D LI F ++ A K + + G
Sbjct: 309 LMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNG 368
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PDI YN +S +CK D A +V ++ G PD+ TYN ++ +L N G + AL
Sbjct: 369 CLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARAL 428
Query: 612 KMMEDLIEE 638
KM+ ++IE+
Sbjct: 429 KMVSEMIEK 437
Score = 64.3 bits (155), Expect = 3e-08
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFL-QCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERY 431
L+ C G L L Q K VI T LI+ + +A K + +
Sbjct: 167 LIGSLCDRGKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSI 226
Query: 432 G-EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLC-NRGKLSL 605
G +PD+Y YNA + G+C+ M+D A + + + +G PD+++YNI++ +L +RGK S
Sbjct: 227 GLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSD 286
Query: 606 ALKMMEDLI 632
K+M +++
Sbjct: 287 GEKLMNEML 295
Score = 60.1 bits (144), Expect = 6e-07
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNV-EKAAKAMRILERY 431
++ C+ D+ F++ + + G K DVI L++ + K M +
Sbjct: 238 IIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCA 297
Query: 432 G-EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLA 608
G EP++ Y+ +S LC+ +D A +L M +G PD TY+ +I + C G+L +A
Sbjct: 298 GCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMA 357
Query: 609 LKMMEDLI 632
+K ++ +I
Sbjct: 358 IKFLDYMI 365
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/130 (24%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
L+ + G E + L M+++G + D+ +I+G K +++A + +R L G
Sbjct: 203 LIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKG 262
Query: 435 -EPDIYAYNAFVSGLCK-ANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLA 608
+PD+ +YN + L ++++ M G P++VTY+I++ +LC GKL A
Sbjct: 263 CKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEA 322
Query: 609 LKMMEDLIEE 638
+ +++ ++++
Sbjct: 323 INLLKIMVDK 332
>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 189 bits (480), Expect = 6e-46
Identities = 88/164 (53%), Positives = 120/164 (73%)
Frame = +3
Query: 150 KITNPRNLEGVKVSTEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLG 329
++ N N +G T + ++DF++ H +K L+R CK G Y E LYFL+ MV G
Sbjct: 48 RLNNNNNNKGHTRVTSSDTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRG 107
Query: 330 YKADVILCTKLIKGFFSSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQ 509
YK DVILCTKLIKG F+SK EKA + M ILE+YG+PD +AYNA +SG C+++ D+AN+
Sbjct: 108 YKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCRSDRFDAANR 167
Query: 510 VLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
V+ RM+ RGF+PD+VTYNI+IGSLC RGKL LALK+M+ L+E++
Sbjct: 168 VILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDN 211
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++ G + M+ G + +++ + LI +A +R+++ G
Sbjct: 289 LLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKG 348
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y Y+ +S CK +D A + M G+ PDIV YN ++GSLC +G+ AL
Sbjct: 349 LNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEAL 408
Query: 612 KMMEDLIE 635
+ + L E
Sbjct: 409 NIFKKLEE 416
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 185 bits (470), Expect = 9e-45
Identities = 87/180 (48%), Positives = 125/180 (69%), Gaps = 1/180 (0%)
Frame = +3
Query: 105 PHYSSVFRCRSNRESKITNPRNLEGVKVSTEARPNHLPTYH-DFKEAHFLKLLHRSCKAG 281
P++ +V S+ ++ + V TE R + ++ F++ LK+ HRSC++G
Sbjct: 48 PNHDNVKSFSSSGAARNLQAATTQDATVPTERRQHQTHSHSLGFRDTQMLKIFHRSCRSG 107
Query: 282 NYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYGEPDIYAYNA 461
NY E L+ L+ MV GY DVILCTKLIKGFF+ +N+ KA + M ILE++G+PD++AYNA
Sbjct: 108 NYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNA 167
Query: 462 FVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
++G CK N ID A +VL RMR +GF+PD VTYNIMIGSLC+RGKL LALK+++ L+ ++
Sbjct: 168 LINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDN 227
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G L L +++ + VI T LI+ V++A K + +L R +PD+
Sbjct: 208 CSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 267
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ YN + G+CK M+D A +++ + RG PD+++YNI++ +L N+GK K+M
Sbjct: 268 FTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTK 327
Query: 627 LIEE 638
+ E
Sbjct: 328 MFSE 331
Score = 65.1 bits (157), Expect = 2e-08
Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G D ++ + G + DVI L++ + E+ K M ++
Sbjct: 273 IIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 332
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+P++ Y+ ++ LC+ I+ A +L M+ +G +PD +Y+ +I + C G+L LA+
Sbjct: 333 CDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAI 392
Query: 612 KMMEDLIEE 638
+ +E +I +
Sbjct: 393 EFLETMISD 401
Score = 63.2 bits (152), Expect = 7e-08
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++EG + M + +V+ + LI +E+A +++++ G
Sbjct: 308 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKG 367
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ ++ C+ +D A + L M G PDIV YN ++ +LC GK AL
Sbjct: 368 LSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 427
Query: 612 KMMEDLIE 635
++ L E
Sbjct: 428 EIFGKLGE 435
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDI 446
CK G D+ L + +G + + +SS + +A + + G +PD
Sbjct: 418 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDE 477
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YN+ +S LC+ M+D A +L MR F P +VTYNI++ C ++ A+ ++E
Sbjct: 478 ITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLES 537
Query: 627 LI 632
++
Sbjct: 538 MV 539
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 185 bits (469), Expect = 1e-44
Identities = 100/205 (48%), Positives = 136/205 (66%), Gaps = 8/205 (3%)
Frame = +3
Query: 51 EFFPQGLT-FT----RQKLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKVST--EARPN 209
+F P+ L FT +QK T S+V C NP++ E V+VS+ E RPN
Sbjct: 8 DFVPRNLVIFTSQHQQQKPTTSHSVQSTVVSC--------INPKSNERVRVSSSAETRPN 59
Query: 210 -HLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSK 386
HL ++ D KE F+KL+ RS +AG +DE LYF++ MV G K DV++CTKLIK FF +
Sbjct: 60 THLLSF-DVKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 118
Query: 387 NVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNI 566
KA + M ILE+YGEPD++AYNA +SG CKAN I+ AN+VL R+R RGF+PD+VTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 567 MIGSLCNRGKLSLALKMMEDLIEED 641
MIGSLC+RG + K+ + L+ ++
Sbjct: 179 MIGSLCSRGMIESGFKVFDQLLRDN 203
Score = 67.0 bits (162), Expect = 5e-09
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++EG + M++ G + +V+ + LI E A +R + G
Sbjct: 284 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 343
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A + L M G PDIV YN ++ + C G AL
Sbjct: 344 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 403
Query: 612 KMMEDL 629
++ E L
Sbjct: 404 EIFEKL 409
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G + G ++ K VI T LI+ +KA K + + R PD+
Sbjct: 184 CSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDM 243
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ NA + G+CK M+ A Q + + RG PD+++YN+++ +L N GK K+M +
Sbjct: 244 FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303
Query: 627 LI 632
+I
Sbjct: 304 MI 305
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G + F++ + + G + DVI L++ + E+ K M ++ R
Sbjct: 249 IIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 308
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP++ Y+ +S LC+ + A VL + +G PD +Y+ +I + C G+L LA+
Sbjct: 309 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 368
Query: 612 KMMEDLIEE 638
+ ++ +I +
Sbjct: 369 EFLDYMISD 377
Score = 62.8 bits (151), Expect = 9e-08
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
+L CK GN D+ L + + ++G +V + +SS + +A + +L +
Sbjct: 389 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 448
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EPD YN+ +S LC+ M+D A +L M F P +V+YNI+I C +++ A+
Sbjct: 449 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVVSYNIIILGFCKTRRINEAI 508
Query: 612 KMMEDLIEE 638
+++ + E+
Sbjct: 509 EVLAAMFEK 517
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 184 bits (468), Expect = 2e-44
Identities = 100/205 (48%), Positives = 136/205 (66%), Gaps = 8/205 (3%)
Frame = +3
Query: 51 EFFPQGLT-FTRQ----KLGTRKPHYSSVFRCRSNRESKITNPRNLEGVKVST--EARPN 209
+F P+ L FT Q K T S+V C NP++ E V+VS+ E RPN
Sbjct: 8 DFVPRNLVIFTSQHQQLKPTTSHSVQSTVVSC--------INPKSNERVRVSSSAETRPN 59
Query: 210 -HLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSK 386
HL ++ D KE F+KL+ +S +AG +DE LYF++ MV G K DV++CTKLIK FF +
Sbjct: 60 THLLSF-DVKETQFMKLIKKSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQER 118
Query: 387 NVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNI 566
KA + M ILE+YGEPD++AYNA +SG CKAN I+ AN+VL R+R RGF+PD+VTYNI
Sbjct: 119 KSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNI 178
Query: 567 MIGSLCNRGKLSLALKMMEDLIEED 641
MIGSLC+RG + A K+ + L+ ++
Sbjct: 179 MIGSLCSRGMIESAFKVFDQLLRDN 203
Score = 67.0 bits (162), Expect = 5e-09
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++EG + M++ G + +V+ + LI E A +R + G
Sbjct: 284 LLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKG 343
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ +S CK +D A + L M G PDIV YN ++ + C G AL
Sbjct: 344 LTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQAL 403
Query: 612 KMMEDL 629
++ E L
Sbjct: 404 EIFEKL 409
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/129 (25%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G + F++ + + G + DVI L++ + E+ K M ++ R
Sbjct: 249 IIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRG 308
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EP++ Y+ +S LC+ + A VL + +G PD +Y+ +I + C G+L LA+
Sbjct: 309 LEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAI 368
Query: 612 KMMEDLIEE 638
+ ++ +I +
Sbjct: 369 EFLDYMISD 377
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G + ++ K VI T LI+ +KA K + +L R PD+
Sbjct: 184 CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDM 243
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ NA + G+CK M+ A Q + + RG PD+++YN+++ +L N GK K+M +
Sbjct: 244 FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303
Query: 627 LI 632
+I
Sbjct: 304 MI 305
Score = 61.2 bits (147), Expect = 3e-07
Identities = 34/129 (26%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
+L CK GN D+ L + + ++G +V + +SS + +A + +L +
Sbjct: 389 ILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKG 448
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
EPD YN+ +S LC+ M+D A +L M F P +++YNI+I C +++ ++
Sbjct: 449 IEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESI 508
Query: 612 KMMEDLIEE 638
+++ + E+
Sbjct: 509 EVLAAMFEK 517
>ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 184 bits (467), Expect = 2e-44
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 6/210 (2%)
Frame = +3
Query: 30 MTTTFCAEFFPQGLTFTRQKLGTRKPHYSSVFRCRSNRESKITNPRNL----EGVKVSTE 197
MTTT +F P +F NR + +N R L E ++
Sbjct: 1 MTTTVSTDFLP-------------------LFNPHPNRTNSHSNSRTLPILNETTNINRT 41
Query: 198 ARPNHLPTYH--DFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKG 371
P H DFK+ H LK L RSCKAGN++E LYFL+ +VN G+K DV+LCTKLI G
Sbjct: 42 LSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHG 101
Query: 372 FFSSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDI 551
F+SK ++KA + M ILE +G PD+ AYNA ++G C+AN IDSA QVL RM+ +GF+PDI
Sbjct: 102 LFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDI 161
Query: 552 VTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
VTYNI+IGSLC+RG L AL+ L++E+
Sbjct: 162 VTYNILIGSLCSRGMLDSALEFKNQLLKEN 191
Score = 82.8 bits (203), Expect = 8e-14
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
L+ C G D L F ++ K V+ T LI+ +++A K + +LE
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD++ YN+ + G+C+ +D A Q++S + +G+APD++TYNI++ L N+GK
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286
Query: 612 KMMEDLI 632
++M D++
Sbjct: 287 ELMSDMV 293
Score = 67.8 bits (164), Expect = 3e-09
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++ G + MV G +A+V+ + LI VE+ ++ +++ G
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+PD Y Y+ ++ LCK +D A +VL M G PDIV YN ++ LC + + AL
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEAL 391
Query: 612 KMMEDLIE 635
+ E L E
Sbjct: 392 SIFEKLGE 399
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/129 (23%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
++ C+ G D + + + GY DVI L++G + E + M + G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
E ++ Y+ +S +C+ ++ +L M+ +G PD Y+ +I +LC G++ LA+
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
Query: 612 KMMEDLIEE 638
++++ +I +
Sbjct: 357 EVLDVMISD 365
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 183 bits (465), Expect = 3e-44
Identities = 87/163 (53%), Positives = 117/163 (71%), Gaps = 4/163 (2%)
Frame = +3
Query: 165 RNLEGVK----VSTEARPNHLPTYHDFKEAHFLKLLHRSCKAGNYDEGLYFLQCMVNLGY 332
RNL+ + TE R H + F++ LK+ HRSC++GNY E L+ L+ MV GY
Sbjct: 58 RNLQATTTDAAIPTERRQQHSQSL-GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGY 116
Query: 333 KADVILCTKLIKGFFSSKNVEKAAKAMRILERYGEPDIYAYNAFVSGLCKANMIDSANQV 512
DVILCTKLIKGFF+ +NV KA + M ILE++G+PD++AYNA ++G CK N ID A +V
Sbjct: 117 NPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRV 176
Query: 513 LSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMEDLIEED 641
L RMR + F+PD VTYNIMIGSLC+RGKL LALK+++ L+ ++
Sbjct: 177 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Score = 72.8 bits (177), Expect = 8e-11
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERYGEPDI 446
C G D L L +++ + VI T LI+ V++A K + +L R +PD+
Sbjct: 200 CSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 259
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
+ YN + G+CK M+D A +++ + +G PD+++YNI++ +L N+GK K+M
Sbjct: 260 FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
Query: 627 LIEE 638
+ E
Sbjct: 320 MFSE 323
Score = 64.3 bits (155), Expect = 3e-08
Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAM-RILERY 431
++ CK G D ++ + G + DVI L++ + E+ K M ++
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 432 GEPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
+P++ Y+ ++ LC+ I+ A +L M+ +G PD +Y+ +I + C G+L +A+
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384
Query: 612 KMMEDLIEE 638
+ +E +I +
Sbjct: 385 EFLETMISD 393
Score = 62.8 bits (151), Expect = 9e-08
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +3
Query: 255 LLHRSCKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG 434
LL G ++EG + M + +V+ + LI +E+A +++++ G
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 435 -EPDIYAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLAL 611
PD Y+Y+ ++ C+ +D A + L M G PDIV YN ++ +LC GK AL
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 612 KMMEDLIE 635
++ L E
Sbjct: 420 EIFGKLGE 427
Score = 57.4 bits (137), Expect = 4e-06
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 270 CKAGNYDEGLYFLQCMVNLGYKADVILCTKLIKGFFSSKNVEKAAKAMRILERYG-EPDI 446
CK G D+ L + +G + + +SS + +A + + G +PD
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDE 469
Query: 447 YAYNAFVSGLCKANMIDSANQVLSRMRGRGFAPDIVTYNIMIGSLCNRGKLSLALKMMED 626
YN+ +S LC+ M+D A ++L MR F P +VTYNI++ C ++ A+ +++
Sbjct: 470 ITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDS 529
Query: 627 LI 632
++
Sbjct: 530 MV 531