BLASTX nr result
ID: Mentha23_contig00008883
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha23_contig00008883 (413 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003614205.1| F-box/kelch-repeat protein [Medicago truncat... 60 3e-07 ref|XP_003614204.1| F-box protein [Medicago truncatula] gi|35551... 58 2e-06 ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm... 56 6e-06 ref|XP_002308788.2| hypothetical protein POPTR_0006s01370g [Popu... 55 8e-06 >ref|XP_003614205.1| F-box/kelch-repeat protein [Medicago truncatula] gi|357487837|ref|XP_003614206.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355515540|gb|AES97163.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355515541|gb|AES97164.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 351 Score = 60.1 bits (144), Expect = 3e-07 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Frame = -2 Query: 370 LSVLRGMLCVSLNHEEFCEVWVMEEYGVAKSWAKKFSFKYFDPDSGIKLKPILPLYLYEN 191 L VLR LC+ + + +VW+M+EYG+ +SW K +S + G ++ I LY++E+ Sbjct: 246 LEVLRDCLCIYVTSDLDLDVWIMKEYGIKESWTKLYSVSFV----GGQMYDIRTLYIFEH 301 Query: 190 GEILVIAGDVGCRRRTFVY--KDEETTPQEVKIGSSLGYAFLYVDSLVA 50 +ILV D + VY K + Q+++ GS L +Y++SL++ Sbjct: 302 DQILVELHDWERTQHLIVYDSKIDTFNIQDIENGSLLKNPKVYIESLIS 350 >ref|XP_003614204.1| F-box protein [Medicago truncatula] gi|355515539|gb|AES97162.1| F-box protein [Medicago truncatula] Length = 254 Score = 57.8 bits (138), Expect = 2e-06 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Frame = -2 Query: 370 LSVLRGMLCVSLNHEEFCEVWVMEEYGVAKSWAKKFSFKYFDPDSGIKLKPILPLYLYEN 191 L VLR LC+ + + +VW+M+EY + +SW K +S + G ++ I LY++E+ Sbjct: 149 LEVLRDCLCIYVTSDLDLDVWIMKEYAIKESWTKLYSVSFV----GGQMYDIRTLYIFEH 204 Query: 190 GEILVIAGDVGCRRRTFVY--KDEETTPQEVKIGSSLGYAFLYVDSLVA 50 +ILV D + VY K + Q+++ GS L +Y++SL++ Sbjct: 205 DQILVELHDWERTQHLIVYDSKIDTFNIQDIENGSLLKNPKVYIESLIS 253 >ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis] gi|223543892|gb|EEF45418.1| conserved hypothetical protein [Ricinus communis] Length = 316 Score = 55.8 bits (133), Expect = 6e-06 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%) Frame = -2 Query: 397 YSPVMCRARLSVLRGMLCVSLN-HEEFCEVWVMEEYGVAKSWAKKFSFKYFDPDSGIKLK 221 Y ++ L VL G LCV N H + WVM+EYGV +SW + + Y D + L+ Sbjct: 198 YGELVYDRTLGVLDGCLCVMCNYHAVRADFWVMKEYGVRESWIRLVTVPYLDYPGSLHLQ 257 Query: 220 PILPLYLYENGEILVIAGDVGCRRRTFVYKDEETTPQEVKIGSSLGY--AFLYVDSLVA 50 +P + +NGE+L + + +Y T + I +S + A +Y+DSLV+ Sbjct: 258 YSVPYAIADNGEVL-----LEFKSSLVIYNPNYGTFKYPVINNSCSWVDAEVYIDSLVS 311 >ref|XP_002308788.2| hypothetical protein POPTR_0006s01370g [Populus trichocarpa] gi|550335216|gb|EEE92311.2| hypothetical protein POPTR_0006s01370g [Populus trichocarpa] Length = 411 Score = 55.5 bits (132), Expect = 8e-06 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 2/110 (1%) Frame = -2 Query: 370 LSVLRGMLCVSLNHEEFC-EVWVMEEYGVAKSWAKKFSFKYFDPDSGIK-LKPILPLYLY 197 + VL G LCV N+E C +VWVM+EYGV +SW K FS S L+P+ +Y Sbjct: 266 VGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSVHAIKWISAFMFLRPL----VY 321 Query: 196 ENGEILVIAGDVGCRRRTFVYKDEETTPQEVKIGSSLGYAFLYVDSLVAL 47 G +V+ G + + +K++ V+ G S + +YV+SL+ + Sbjct: 322 SKGGDMVLLEVNGEKLLWYDWKNKHAKVVRVRGGPSSFGSEMYVESLIRI 371