BLASTX nr result

ID: Mentha23_contig00008345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00008345
         (343 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU36476.1| hypothetical protein MIMGU_mgv1a011581mg [Mimulus...    80   4e-13
gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlise...    61   1e-07
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop...    59   5e-07
gb|ACU23303.1| unknown [Glycine max]                                   59   5e-07
ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    59   9e-07
dbj|BAD42910.1| putative protein [Arabidopsis thaliana]                59   9e-07
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi...    59   9e-07
emb|CAB78029.1| putative protein [Arabidopsis thaliana]                59   9e-07
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps...    58   1e-06
dbj|BAD43393.1| putative protein [Arabidopsis thaliana]                58   2e-06
ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutr...    57   2e-06
ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arab...    56   5e-06

>gb|EYU36476.1| hypothetical protein MIMGU_mgv1a011581mg [Mimulus guttatus]
          Length = 277

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +2

Query: 140 TRPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDL 319
           T+ R +N  LF+V+S P + A+P      APE+    E+EVS+TRLL+QNVPWT T DD+
Sbjct: 42  TKRRRANLQLFIVQSTPQVEAIPAAVQSEAPEENVAEEDEVSQTRLLLQNVPWTCTADDI 101

Query: 320 RPLFQKYG 343
           RPL +K+G
Sbjct: 102 RPLVEKFG 109


>gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlisea aurea]
          Length = 263

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
 Frame = +2

Query: 137 ATRPRNSNHHLFLVKSNPALRALPTIQSESAP-----EKTAESEEEVSRTRLLVQNVPWT 301
           A +P   +  L L KS+    +   + +ES       E+ A  E+E+SRTRLLVQNVPWT
Sbjct: 31  AWKPCRLSFSLRLQKSSKLQLSTTLLPAESGVDSVTGEENAAEEDEISRTRLLVQNVPWT 90

Query: 302 ATEDDLRPLFQKYG 343
            T DD++PLF+ YG
Sbjct: 91  CTADDIQPLFENYG 104


>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 345

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = +2

Query: 167 LFLVKSNPALRALPT--IQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLRPLFQKY 340
           L L+ +   L   PT    SE   E+   SEEE SRTRLL QNVPWT+T +D+R LF+K+
Sbjct: 82  LSLITTKQTLNLTPTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKH 141

Query: 341 G 343
           G
Sbjct: 142 G 142


>gb|ACU23303.1| unknown [Glycine max]
          Length = 315

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = +2

Query: 167 LFLVKSNPALRALPT--IQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLRPLFQKY 340
           L L+ +   L   PT    SE   E+   SEEE SRTRLL QNVPWT+T +D+R LF+K+
Sbjct: 52  LSLITTKQTLNLTPTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKH 111

Query: 341 G 343
           G
Sbjct: 112 G 112


>ref|XP_004501684.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cicer
           arietinum]
          Length = 287

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = +2

Query: 143 RPRNSNHHLFLVKSN-----PALRALPTIQ-----SESAPEKTAESEEEVSRTRLLVQNV 292
           +P ++N +LF  KS      P L  + T Q     SE    +  E  EE+SRTRLL QNV
Sbjct: 33  KPYSTNPNLFFSKSQSSFQFPTLSLIRTKQHANSTSEQVTVEEKEDTEELSRTRLLAQNV 92

Query: 293 PWTATEDDLRPLFQKYG 343
           PWT+T +D+R LF+++G
Sbjct: 93  PWTSTAEDIRSLFEQHG 109


>dbj|BAD42910.1| putative protein [Arabidopsis thaliana]
          Length = 171

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +2

Query: 143 RPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLR 322
           + RN   +       P L +  +  S SAPE     EEE+S+TRL+ QNVPWT+T +D+R
Sbjct: 57  KSRNLTSYFSTTTQEPVLES--SSSSSSAPEVV---EEEISKTRLIAQNVPWTSTPEDIR 111

Query: 323 PLFQKYG 343
            LF+KYG
Sbjct: 112 SLFEKYG 118


>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
           thaliana] gi|51968384|dbj|BAD42884.1| putative protein
           [Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
           putative protein [Arabidopsis thaliana]
           gi|51969588|dbj|BAD43486.1| putative protein
           [Arabidopsis thaliana] gi|51970774|dbj|BAD44079.1|
           putative protein [Arabidopsis thaliana]
           gi|62319325|dbj|BAD94588.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657315|gb|AEE82715.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 304

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +2

Query: 143 RPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLR 322
           + RN   +       P L +  +  S SAPE     EEE+S+TRL+ QNVPWT+T +D+R
Sbjct: 57  KSRNLTSYFSTTTQEPVLES--SSSSSSAPEVV---EEEISKTRLIAQNVPWTSTPEDIR 111

Query: 323 PLFQKYG 343
            LF+KYG
Sbjct: 112 SLFEKYG 118


>emb|CAB78029.1| putative protein [Arabidopsis thaliana]
          Length = 211

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +2

Query: 143 RPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLR 322
           + RN   +       P L +  +  S SAPE     EEE+S+TRL+ QNVPWT+T +D+R
Sbjct: 57  KSRNLTSYFSTTTQEPVLES--SSSSSSAPEVV---EEEISKTRLIAQNVPWTSTPEDIR 111

Query: 323 PLFQKYG 343
            LF+KYG
Sbjct: 112 SLFEKYG 118


>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
           gi|565460694|ref|XP_006288346.1| hypothetical protein
           CARUB_v10001593mg [Capsella rubella]
           gi|482557051|gb|EOA21243.1| hypothetical protein
           CARUB_v10001593mg [Capsella rubella]
           gi|482557052|gb|EOA21244.1| hypothetical protein
           CARUB_v10001593mg [Capsella rubella]
          Length = 297

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = +2

Query: 212 IQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLRPLFQKYG 343
           I   S+P  + E E+E+S+TRL+ QNVPW AT +D+R LF+KYG
Sbjct: 65  ILESSSPSSSPEVEDEISKTRLIAQNVPWAATPEDIRSLFEKYG 108


>dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
          Length = 304

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +2

Query: 143 RPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLR 322
           + RN   +       P L +  +  S SAPE     EEE+S+TRL+ QNVPWT+T +D+R
Sbjct: 57  KSRNLTSYFSTTTQEPVLDS--SSSSSSAPEVV---EEEISKTRLIAQNVPWTSTPEDIR 111

Query: 323 PLFQKYG 343
            LF+KYG
Sbjct: 112 SLFEKYG 118


>ref|XP_006397214.1| hypothetical protein EUTSA_v10028847mg [Eutrema salsugineum]
           gi|557098231|gb|ESQ38667.1| hypothetical protein
           EUTSA_v10028847mg [Eutrema salsugineum]
          Length = 298

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
 Frame = +2

Query: 137 ATRPRNSNHHLFLVKSNPALRALPTIQSESAPEKTAES------EEEVSRTRLLVQNVPW 298
           A+  R   H  FL       R L T  S +  E   ES      EEE+S+TRL+ QNVPW
Sbjct: 39  ASLSRLHRHETFLDSVPAKSRNLTTYFSSTTQEPILESSSSSSTEEEISKTRLIAQNVPW 98

Query: 299 TATEDDLRPLFQKYG 343
           T+T +D+R LF+K+G
Sbjct: 99  TSTPEDIRSLFEKFG 113


>ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arabidopsis lyrata subsp.
           lyrata] gi|297318197|gb|EFH48619.1| hypothetical protein
           ARALYDRAFT_489706 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +2

Query: 206 PTIQSESAPEKTAESEEEVSRTRLLVQNVPWTATEDDLRPLFQKYG 343
           P ++S S+   T   EEE+S+TRL+ QNVPWT+T +D+R LF+KYG
Sbjct: 72  PVLESSSS-SATEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYG 116


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