BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00008067
         (1131 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   338   3e-90
gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   332   1e-88
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   323   6e-86
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   323   6e-86
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   323   8e-86
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   321   3e-85
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              321   3e-85
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   314   5e-83
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   313   6e-83
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   313   1e-82
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   313   1e-82
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   312   2e-82
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   311   2e-82
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   309   1e-81
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-...   309   1e-81
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   309   1e-81
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   308   2e-81
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   308   3e-81
ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-...   308   4e-81
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...   307   5e-81

>gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
            gi|604346415|gb|EYU44878.1| hypothetical protein
            MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 520

 Score =  338 bits (866), Expect = 3e-90
 Identities = 204/377 (54%), Positives = 237/377 (62%), Gaps = 30/377 (7%)
 Frame = -3

Query: 1042 SRRPHSVKALKD----PHSPCSL----VH--------DHHPDEYLVDALLLLQKSMLEKQ 911
            +R PHS++ALK+       PC+L    +H        D   DEYLVDA+LLLQKS+LEKQ
Sbjct: 62   NRHPHSIRALKEHVDAASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQ 121

Query: 910  WNLAPEXXXXXXXXXXXXXK---------SEIDEVTCSGTSAXXXXXXXXXXRGGAXXXX 758
            WNL+ E                        +I +VTCSGTSA            G     
Sbjct: 122  WNLSAESSTKQTVTSPRERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISN 181

Query: 757  D--EMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYY---VSQQLLTHGEVVR 593
               + +  QW                  ++ P         GY    +S+ LLTH +VV+
Sbjct: 182  SHHDNVRKQWRS----------------IISPELLQNSSRRGYVKGVISEDLLTHSQVVQ 225

Query: 592  LSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSN 413
            LS  IKAGL LE+RRSRLK+RLGCEPSDE                +IECSLAREKLAMSN
Sbjct: 226  LSQIIKAGLLLEDRRSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSN 285

Query: 412  IRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRAL 233
            IRLVMSIAQRYD+MGAEM D            IEK+DSSKGFKISTYVYWWIRQGVS+AL
Sbjct: 286  IRLVMSIAQRYDHMGAEMADLIQGGLIGLLRGIEKYDSSKGFKISTYVYWWIRQGVSKAL 345

Query: 232  VESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKV 53
            VE+SRTLRLPTHLHERLSLIRNAKARLEE+GITPSI RIAESLNM+++KVRNATEA SKV
Sbjct: 346  VENSRTLRLPTHLHERLSLIRNAKARLEEKGITPSISRIAESLNMSQKKVRNATEANSKV 405

Query: 52   FSLDREAYPSLNGLPGE 2
            FSLDREA+PSLNG+PG+
Sbjct: 406  FSLDREAFPSLNGIPGK 422


>gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 523

 Score =  332 bits (852), Expect = 1e-88
 Identities = 204/380 (53%), Positives = 237/380 (62%), Gaps = 33/380 (8%)
 Frame = -3

Query: 1042 SRRPHSVKALKD----PHSPCSL----VH--------DHHPDEYLVDALLLLQKSMLEKQ 911
            +R PHS++ALK+       PC+L    +H        D   DEYLVDA+LLLQKS+LEKQ
Sbjct: 62   NRHPHSIRALKEHVDAASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQ 121

Query: 910  WNLAPEXXXXXXXXXXXXXK---------SEIDEVTCSGTSAXXXXXXXXXXRGGAXXXX 758
            WNL+ E                        +I +VTCSGTSA            G     
Sbjct: 122  WNLSAESSTKQTVTSPRERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISN 181

Query: 757  D--EMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYY---VSQQLLTHGEVVR 593
               + +  QW                  ++ P         GY    +S+ LLTH +VV+
Sbjct: 182  SHHDNVRKQWRS----------------IISPELLQNSSRRGYVKGVISEDLLTHSQVVQ 225

Query: 592  LSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSN 413
            LS  IKAGL LE+RRSRLK+RLGCEPSDE                +IECSLAREKLAMSN
Sbjct: 226  LSQIIKAGLLLEDRRSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSN 285

Query: 412  IRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQ---GVS 242
            IRLVMSIAQRYD+MGAEM D            IEK+DSSKGFKISTYVYWWIRQ   GVS
Sbjct: 286  IRLVMSIAQRYDHMGAEMADLIQGGLIGLLRGIEKYDSSKGFKISTYVYWWIRQHCQGVS 345

Query: 241  RALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAV 62
            +ALVE+SRTLRLPTHLHERLSLIRNAKARLEE+GITPSI RIAESLNM+++KVRNATEA 
Sbjct: 346  KALVENSRTLRLPTHLHERLSLIRNAKARLEEKGITPSISRIAESLNMSQKKVRNATEAN 405

Query: 61   SKVFSLDREAYPSLNGLPGE 2
            SKVFSLDREA+PSLNG+PG+
Sbjct: 406  SKVFSLDREAFPSLNGIPGK 425


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
            gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
            [Theobroma cacao]
          Length = 450

 Score =  323 bits (829), Expect = 6e-86
 Identities = 199/361 (55%), Positives = 224/361 (62%), Gaps = 14/361 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSLVHDHHPD--------------EYLVDALLLLQKSMLEKQWN 905
            +RR  S+KALK+     S+V    P               +Y V+ALLLLQKSMLEKQW 
Sbjct: 66   NRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 904  LAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXX 725
            L+ E             K     VTCSG SA                     ++ Q    
Sbjct: 126  LSFERTVFTESPSRKIHKKI--PVTCSGVSARQRRFNTK-----------RKILIQNKSI 172

Query: 724  XXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRS 545
                       +   LL    K         VS +LL+H EVVRLS KIKAGL+LEE R 
Sbjct: 173  IQPNAKQLRSLISPELLQSRLKGYVKGV---VSDELLSHAEVVRLSKKIKAGLSLEEHRL 229

Query: 544  RLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGA 365
            RLK+RLGCEPSDE                +IECSLAREKLAMSN+RLVMSIAQRYDNMGA
Sbjct: 230  RLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGA 289

Query: 364  EMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHER 185
            EM D            IEKFDSSKG+KISTYVYWWIRQGVSRALVE+SRTLRLPTHLHER
Sbjct: 290  EMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHER 349

Query: 184  LSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPG 5
            L LIRNAK RLEE+GITP+IDRIAESLNM+++KVRNATEAVSKVFSLDR+A+PSLNGLPG
Sbjct: 350  LGLIRNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPG 409

Query: 4    E 2
            E
Sbjct: 410  E 410


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  323 bits (829), Expect = 6e-86
 Identities = 199/361 (55%), Positives = 224/361 (62%), Gaps = 14/361 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSLVHDHHPD--------------EYLVDALLLLQKSMLEKQWN 905
            +RR  S+KALK+     S+V    P               +Y V+ALLLLQKSMLEKQW 
Sbjct: 66   NRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 904  LAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXX 725
            L+ E             K     VTCSG SA                     ++ Q    
Sbjct: 126  LSFERTVFTESPSRKIHKKI--PVTCSGVSARQRRFNTK-----------RKILIQNKSI 172

Query: 724  XXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRS 545
                       +   LL    K         VS +LL+H EVVRLS KIKAGL+LEE R 
Sbjct: 173  IQPNAKQLRSLISPELLQSRLKGYVKGV---VSDELLSHAEVVRLSKKIKAGLSLEEHRL 229

Query: 544  RLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGA 365
            RLK+RLGCEPSDE                +IECSLAREKLAMSN+RLVMSIAQRYDNMGA
Sbjct: 230  RLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGA 289

Query: 364  EMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHER 185
            EM D            IEKFDSSKG+KISTYVYWWIRQGVSRALVE+SRTLRLPTHLHER
Sbjct: 290  EMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHER 349

Query: 184  LSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPG 5
            L LIRNAK RLEE+GITP+IDRIAESLNM+++KVRNATEAVSKVFSLDR+A+PSLNGLPG
Sbjct: 350  LGLIRNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPG 409

Query: 4    E 2
            E
Sbjct: 410  E 410


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  323 bits (828), Expect = 8e-86
 Identities = 196/359 (54%), Positives = 225/359 (62%), Gaps = 12/359 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSLVHDHHPD-----------EYLVDALLLLQKSMLEKQWNLA- 899
            +R   S+KALK+     S      PD           EYLV+A LLLQKSMLEKQWNL+ 
Sbjct: 64   NRSIQSMKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLSF 123

Query: 898  PEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXXX 719
             E             + +  EVTCSGTSA            G     +E    +      
Sbjct: 124  EEEEEEEEEDMGKKARQKRREVTCSGTSARQRRI------SGRKRVMNEKSKSRVRAALG 177

Query: 718  XXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRL 539
                      G+                 VS++LLTH +VV LS+KIKAGL LE+ +SRL
Sbjct: 178  VENRLKGYVKGV-----------------VSEELLTHAQVVLLSNKIKAGLLLEDHKSRL 220

Query: 538  KQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEM 359
            K+R+G EP+DE                +IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM
Sbjct: 221  KERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEM 280

Query: 358  PDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLS 179
             D            IEKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP+HLHERLS
Sbjct: 281  ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLS 340

Query: 178  LIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
            LIRNAK RLEE+GITPSIDRIAE LNM+++KVRNATEA+SKVFSLDREA+PSLNGLPGE
Sbjct: 341  LIRNAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGE 399


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  321 bits (823), Expect = 3e-85
 Identities = 192/321 (59%), Positives = 212/321 (66%)
 Frame = -3

Query: 964  EYLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXX 785
            EY V+ALLLLQKSMLEKQWNL+ E             K     VTCSG SA         
Sbjct: 108  EYSVEALLLLQKSMLEKQWNLSFEKKVLRDSTSKTTDKKI--PVTCSGVSARQRRMTSTK 165

Query: 784  XRGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHG 605
             +         +M P                V   LL  H K         +S+ LLTH 
Sbjct: 166  RK--TFNKSTCVMHPSTNKPLRAI-------VSPELLQNHVKGYVKGV---LSEDLLTHT 213

Query: 604  EVVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKL 425
            EVVRLS KIK GL++EE +SRLK+RLGCEPSDE                +IEC LAREKL
Sbjct: 214  EVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKL 273

Query: 424  AMSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGV 245
            AMSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGFKISTYVYWWIRQGV
Sbjct: 274  AMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGV 333

Query: 244  SRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEA 65
            SRALVE+SRTLRLPTHLHERL LIRNAK RLEE+GITPSIDRIAESLNM+++KVRNATEA
Sbjct: 334  SRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSKKKVRNATEA 393

Query: 64   VSKVFSLDREAYPSLNGLPGE 2
            +SKVFSLDR+A+PSLNGLPGE
Sbjct: 394  ISKVFSLDRDAFPSLNGLPGE 414


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  321 bits (823), Expect = 3e-85
 Identities = 195/358 (54%), Positives = 224/358 (62%), Gaps = 11/358 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSLVHDHHPD-----------EYLVDALLLLQKSMLEKQWNLAP 896
            +R   S+KALK+     S      PD           EYLV+A LLLQKSMLEKQWNL+ 
Sbjct: 135  NRSIQSMKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLS- 193

Query: 895  EXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXXXX 716
                          + +  EVTCSGTSA            G     +E    +       
Sbjct: 194  -----------FKARQKRREVTCSGTSARQRRI------SGRKRVMNEKSKSRVRAALGV 236

Query: 715  XXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLK 536
                     G+                 VS++LLTH +VV LS+KIKAGL LE+ +SRLK
Sbjct: 237  ENRLKGYVKGV-----------------VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLK 279

Query: 535  QRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMP 356
            +R+G EP+DE                +IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM 
Sbjct: 280  ERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA 339

Query: 355  DXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSL 176
            D            IEKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP+HLHERLSL
Sbjct: 340  DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSL 399

Query: 175  IRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
            IRNAK RLEE+GITPSIDRIAE LNM+++KVRNATEA+SKVFSLDREA+PSLNGLPGE
Sbjct: 400  IRNAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGE 457


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
            arietinum]
          Length = 513

 Score =  314 bits (804), Expect = 5e-83
 Identities = 178/320 (55%), Positives = 209/320 (65%)
 Frame = -3

Query: 961  YLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXX 782
            Y VDALLL+QKSMLEKQW L+ E             + ++  VTCSG SA          
Sbjct: 116  YSVDALLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVT-VTCSGVSARQRRMNSKRK 174

Query: 781  RGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGE 602
                     +M                  GV                   VS++LL+H +
Sbjct: 175  ISSKTGSAVQMRSAITPELLQNRLKGYVKGV-------------------VSEELLSHAQ 215

Query: 601  VVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLA 422
            VV+LS KIKAGL+L+E +SRLK+RLGCEPSD+                +IECSLAREKL 
Sbjct: 216  VVKLSQKIKAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKIIECSLAREKLT 275

Query: 421  MSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVS 242
            MSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGFKISTYVYWWIRQGVS
Sbjct: 276  MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 335

Query: 241  RALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAV 62
            +ALVE+SRTLRLPTHLHERLSLIRNA+ RLEERGITP+IDRIA+ LNM+++KVRNATEA+
Sbjct: 336  KALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMSQKKVRNATEAI 395

Query: 61   SKVFSLDREAYPSLNGLPGE 2
            +KVFS+DREA+PSLNGLPG+
Sbjct: 396  NKVFSIDREAFPSLNGLPGD 415


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  313 bits (803), Expect = 6e-83
 Identities = 185/321 (57%), Positives = 208/321 (64%)
 Frame = -3

Query: 964  EYLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXX 785
            +Y V+ALLLLQKSMLEKQWNL+ E             K     VTCSG SA         
Sbjct: 105  DYSVEALLLLQKSMLEKQWNLSFERTDSSDSPSRKSQKKI--PVTCSGVSARQRRINIRR 162

Query: 784  XRGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHG 605
                      +  +                 V   LL    K         VS++LL+H 
Sbjct: 163  KNLSQSKFTVQANV----------FKQLKSAVSPELLQNRLKGYVKGV---VSEELLSHA 209

Query: 604  EVVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKL 425
            EVVRLS  IKAGL+LE+ +SRLK+RLGC+PSDE                 I CSLAREKL
Sbjct: 210  EVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLAREKL 269

Query: 424  AMSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGV 245
            AMSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGF+ISTYVYWWIRQGV
Sbjct: 270  AMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGV 329

Query: 244  SRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEA 65
            SRALVE+SRTLRLP HLHERL LIRNAK RLEE+G+TPSIDRIAESLN++++KVRNATEA
Sbjct: 330  SRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEA 389

Query: 64   VSKVFSLDREAYPSLNGLPGE 2
            VSKVFSLDREA+PSLNGLPGE
Sbjct: 390  VSKVFSLDREAFPSLNGLPGE 410


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
            gi|550316904|gb|ERP49007.1| hypothetical protein
            POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  313 bits (801), Expect = 1e-82
 Identities = 189/361 (52%), Positives = 219/361 (60%), Gaps = 14/361 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSL---------VHDHHPDE-----YLVDALLLLQKSMLEKQWN 905
            +R  HS+KALK+     S            D   +E     Y V+ALLLLQKSMLEKQWN
Sbjct: 66   NRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLEKQWN 125

Query: 904  LAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXX 725
            L+ E              ++   VTCSG SA                   +    ++   
Sbjct: 126  LSFERTNSSDSTSKKN--NKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRS 183

Query: 724  XXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRS 545
                                Q          VS ++L H EVVRLS  I+AGL+ E+ +S
Sbjct: 184  VSSPDLL-------------QNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKS 230

Query: 544  RLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGA 365
            RLK+RLGCEPSDE                +I+CSLAREKLAMSN+RLVMSIAQ+YDNMGA
Sbjct: 231  RLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGA 290

Query: 364  EMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHER 185
            EM D            IEKFDSSKGFKISTYVYWWIRQGVSRALV++SRTLRLP HLHER
Sbjct: 291  EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHER 350

Query: 184  LSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPG 5
            L LIRNAK RLEE+G+TPSIDRIAESLNM++RKVRNATEA+SKVFSLDREA+PSLNGLPG
Sbjct: 351  LGLIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPG 410

Query: 4    E 2
            E
Sbjct: 411  E 411


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  313 bits (801), Expect = 1e-82
 Identities = 189/361 (52%), Positives = 219/361 (60%), Gaps = 14/361 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKDPHSPCSL---------VHDHHPDE-----YLVDALLLLQKSMLEKQWN 905
            +R  HS+KALK+     S            D   +E     Y V+ALLLLQKSMLEKQWN
Sbjct: 66   NRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLEKQWN 125

Query: 904  LAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXX 725
            L+ E              ++   VTCSG SA                   +    ++   
Sbjct: 126  LSFERTNSSDSTSKKN--NKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRS 183

Query: 724  XXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRS 545
                                Q          VS ++L H EVVRLS  I+AGL+ E+ +S
Sbjct: 184  VSSPDLL-------------QNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKS 230

Query: 544  RLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGA 365
            RLK+RLGCEPSDE                +I+CSLAREKLAMSN+RLVMSIAQ+YDNMGA
Sbjct: 231  RLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGA 290

Query: 364  EMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHER 185
            EM D            IEKFDSSKGFKISTYVYWWIRQGVSRALV++SRTLRLP HLHER
Sbjct: 291  EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHER 350

Query: 184  LSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPG 5
            L LIRNAK RLEE+G+TPSIDRIAESLNM++RKVRNATEA+SKVFSLDREA+PSLNGLPG
Sbjct: 351  LGLIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPG 410

Query: 4    E 2
            E
Sbjct: 411  E 411


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  312 bits (799), Expect = 2e-82
 Identities = 188/360 (52%), Positives = 220/360 (61%), Gaps = 13/360 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKD-------------PHSPCSLVHDHHPDEYLVDALLLLQKSMLEKQWNL 902
            +R+   +KALK+                P S+  +    +Y V+ALLLLQKSMLEKQWNL
Sbjct: 66   NRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNL 125

Query: 901  APEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXX 722
            + E             K     VTCSG SA                      +PQ     
Sbjct: 126  SFERTVLTDSPSKKTHKKV--PVTCSGVSARQRRLNSKKKI-----LSQNKSVPQQNGSK 178

Query: 721  XXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSR 542
                      +   L+  H K         VS++LLTH EVVRLS KIK GL+L++ + R
Sbjct: 179  QLRSM-----ISPELIQNHLKGYVKGV---VSEELLTHAEVVRLSKKIKTGLSLDDHKLR 230

Query: 541  LKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAE 362
            LK+RLGCEPS E                ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+
Sbjct: 231  LKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGAD 290

Query: 361  MPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERL 182
            M D            IEKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP HLHERL
Sbjct: 291  MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERL 350

Query: 181  SLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
             LIRNAK RLEE+G+TPS+DRIAE LNM+++KVRNATEA+ KVFSLDREA+PSLNGLPGE
Sbjct: 351  GLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGE 410


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  311 bits (798), Expect = 2e-82
 Identities = 183/334 (54%), Positives = 212/334 (63%)
 Frame = -3

Query: 1003 HSPCSLVHDHHPDEYLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCS 824
            H+  S   +    +Y V+ALLLLQKSMLEKQW+L+ E             K     VTCS
Sbjct: 92   HNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKV--PVTCS 149

Query: 823  GTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXX 644
            G SA                   +  I +                        Q      
Sbjct: 150  GVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELL-------------QNRLKGY 196

Query: 643  XGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXX 464
                +S++LL+H EVVRLS KIK GL LEER++RLKQRLGCEPS++              
Sbjct: 197  VKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPSEDQLAISLKISRAELR 256

Query: 463  XXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFK 284
              M+E SLAREKLAMSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGFK
Sbjct: 257  SRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFK 316

Query: 283  ISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESL 104
            ISTYVYWWIRQGVSRALVE+SRTLRLPTHLHERL LIRNAK +L+E+GITPS+DRIAESL
Sbjct: 317  ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESL 376

Query: 103  NMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
            NM+++KV+NATEA+SKVFSLDREA+PSLNGLPGE
Sbjct: 377  NMSKKKVQNATEAISKVFSLDREAFPSLNGLPGE 410


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  309 bits (792), Expect = 1e-81
 Identities = 185/360 (51%), Positives = 220/360 (61%), Gaps = 13/360 (3%)
 Frame = -3

Query: 1042 SRRPHSVKALKD-------------PHSPCSLVHDHHPDEYLVDALLLLQKSMLEKQWNL 902
            +R+   +KALK+                P S+  +    +Y V+ALLLLQKSMLEKQWNL
Sbjct: 66   NRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNL 125

Query: 901  APEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXX 722
            + E             K     VTCSG SA                   +++        
Sbjct: 126  SFERTVLTDSPSKKTHKKV--PVTCSGVSARQRRLNSKK----------KILSQNKSVLQ 173

Query: 721  XXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSR 542
                      +   L+  H K         VS++LLTH EVVRLS KIK GL+L++ + R
Sbjct: 174  QNGSKQLRSMISPELIQNHLKGYVKGV---VSEELLTHAEVVRLSKKIKTGLSLDDHKLR 230

Query: 541  LKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAE 362
            LK+RLGCEPS E                ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+
Sbjct: 231  LKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGAD 290

Query: 361  MPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERL 182
            M D            IEKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP HLHERL
Sbjct: 291  MADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERL 350

Query: 181  SLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
             LIRNAK RLEE+G+TP++DRIAE LNM+++KVRNATEA+ KVFSLDREA+PSLNGLPGE
Sbjct: 351  GLIRNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGE 410


>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
            arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Cicer
            arietinum]
          Length = 514

 Score =  309 bits (792), Expect = 1e-81
 Identities = 178/321 (55%), Positives = 209/321 (65%), Gaps = 1/321 (0%)
 Frame = -3

Query: 961  YLVDA-LLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXX 785
            Y VDA LLL+QKSMLEKQW L+ E             + ++  VTCSG SA         
Sbjct: 116  YSVDAPLLLMQKSMLEKQWCLSFEREVVTENSMRVKNRRKVT-VTCSGVSARQRRMNSKR 174

Query: 784  XRGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHG 605
                      +M                  GV                   VS++LL+H 
Sbjct: 175  KISSKTGSAVQMRSAITPELLQNRLKGYVKGV-------------------VSEELLSHA 215

Query: 604  EVVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKL 425
            +VV+LS KIKAGL+L+E +SRLK+RLGCEPSD+                +IECSLAREKL
Sbjct: 216  QVVKLSQKIKAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKIIECSLAREKL 275

Query: 424  AMSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGV 245
             MSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGFKISTYVYWWIRQGV
Sbjct: 276  TMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGV 335

Query: 244  SRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEA 65
            S+ALVE+SRTLRLPTHLHERLSLIRNA+ RLEERGITP+IDRIA+ LNM+++KVRNATEA
Sbjct: 336  SKALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMSQKKVRNATEA 395

Query: 64   VSKVFSLDREAYPSLNGLPGE 2
            ++KVFS+DREA+PSLNGLPG+
Sbjct: 396  INKVFSIDREAFPSLNGLPGD 416


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  309 bits (792), Expect = 1e-81
 Identities = 181/320 (56%), Positives = 206/320 (64%)
 Frame = -3

Query: 961  YLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXX 782
            Y V+ALLLLQKSMLEKQWNL+ E               ++  VTCSG SA          
Sbjct: 106  YSVEALLLLQKSMLEKQWNLSFEREVLTENSSKGKKCRKV-AVTCSGVSARQRRMNTKRK 164

Query: 781  RGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGE 602
               A      M +                  GL                 VS++LL+H E
Sbjct: 165  T--AIKTCGAMQLKSKISPELLQHRLKGYVKGL-----------------VSEELLSHAE 205

Query: 601  VVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLA 422
            VV LS KIK GL+LEE +SRLK++LGCEPSD+                MIECSLAREKLA
Sbjct: 206  VVNLSEKIKVGLSLEEHKSRLKEKLGCEPSDDQMATSLKISRTELRARMIECSLAREKLA 265

Query: 421  MSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVS 242
            MSN+RLVMSIAQ+YDN+GAEM D            IEKFDSSKGFKISTYVYWWIRQGVS
Sbjct: 266  MSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 325

Query: 241  RALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAV 62
            RALVE+SRTLRLP HLHERLSLIRNAK RLEERGITP+IDRIA+ LNM+++KVRNATEA+
Sbjct: 326  RALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAI 385

Query: 61   SKVFSLDREAYPSLNGLPGE 2
            SK+ SLDREA+PSLNGL GE
Sbjct: 386  SKIISLDREAFPSLNGLQGE 405


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
            subsp. vesca]
          Length = 511

 Score =  308 bits (790), Expect = 2e-81
 Identities = 181/321 (56%), Positives = 205/321 (63%)
 Frame = -3

Query: 964  EYLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXX 785
            EY V+ALLLLQKS+LEKQWNL+ E                   VTCSG SA         
Sbjct: 111  EYSVEALLLLQKSLLEKQWNLSFEKKLSTRKITDNKIP-----VTCSGVSARQRRMSTKR 165

Query: 784  XRGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHG 605
                      +    ++              +   LL   Q           S  LLTH 
Sbjct: 166  KAFSKNTSELQPSTNKYCRAT----------ISPSLL---QNRTSGYVKGVTSDHLLTHT 212

Query: 604  EVVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKL 425
            EVVRLS KIK GL++EE +SRLK++LGCEPS E                +I+CSLAREKL
Sbjct: 213  EVVRLSKKIKIGLSVEEHKSRLKEKLGCEPSVEQLATSLRISRTELQSKLIQCSLAREKL 272

Query: 424  AMSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGV 245
             MSN+RLVMSIAQRYDNMGAEM D            IEKFD+SKGFKISTYVYWWIRQGV
Sbjct: 273  TMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGV 332

Query: 244  SRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEA 65
            SRALVE+SRTLRLPTHLHERL LIRNAK RLEE+GITPSID IAESLNM+++KVRNATEA
Sbjct: 333  SRALVENSRTLRLPTHLHERLGLIRNAKVRLEEKGITPSIDSIAESLNMSKKKVRNATEA 392

Query: 64   VSKVFSLDREAYPSLNGLPGE 2
            +SKVFSLDR+A+PSLNGLPGE
Sbjct: 393  ISKVFSLDRDAFPSLNGLPGE 413


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  308 bits (789), Expect = 3e-81
 Identities = 193/360 (53%), Positives = 219/360 (60%), Gaps = 14/360 (3%)
 Frame = -3

Query: 1039 RRPHSVKALK---DPHSPCSLVH------DHHPDE-----YLVDALLLLQKSMLEKQWNL 902
            R PHS KALK   D  S  S V       D   +E     Y V+AL+LLQKSMLEKQWNL
Sbjct: 67   RNPHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSMLEKQWNL 126

Query: 901  APEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXXRGGAXXXXDEMMIPQWXXXX 722
            + E              ++   VTCSG SA                   ++         
Sbjct: 127  SFESINSSDSKIKKS--NKKIPVTCSGVSARQRRLNNKRKNQNQSKFMSDI--------- 175

Query: 721  XXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSR 542
                        LLL               VS ++L H EVVRLS  I+AGL+LE+ +S 
Sbjct: 176  ---------SPDLLL-----NRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSS 221

Query: 541  LKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAMSNIRLVMSIAQRYDNMGAE 362
            LK+RLGCEPSDE                +I+CSLAREKLAMSN+RLVMSIAQ+ DNMGAE
Sbjct: 222  LKERLGCEPSDEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAE 281

Query: 361  MPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERL 182
            M D            IEKFDSSKGFKISTYVYWWIRQGVSRALVE+ RTLRLP HLHERL
Sbjct: 282  MADLVQAGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERL 341

Query: 181  SLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGE 2
             LIRNAK RLEE+G+TPSIDRIAESLNM++RKVRNATEA+SKVFSLDREA+PSLNGLPGE
Sbjct: 342  GLIRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGE 401


>ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
            arietinum] gi|502126947|ref|XP_004499503.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Cicer
            arietinum]
          Length = 513

 Score =  308 bits (788), Expect = 4e-81
 Identities = 175/320 (54%), Positives = 207/320 (64%)
 Frame = -3

Query: 961  YLVDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSEIDEVTCSGTSAXXXXXXXXXX 782
            Y VD LLL+QKSMLEKQW L+ E             + ++  VTCSG SA          
Sbjct: 116  YSVDTLLLMQKSMLEKQWCLSFESEVLTENSTRAKSRRKVT-VTCSGMSARQRRTNTKKK 174

Query: 781  RGGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGE 602
                     ++                  G+                   VS++LL+H +
Sbjct: 175  ITSKSGYARKLRSTISPELLQNRLKGYVKGI-------------------VSEELLSHAQ 215

Query: 601  VVRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLA 422
            VV+LS KIKAGL+L+E +SRLK+RLGCEPSD+                +IECSLAREKL 
Sbjct: 216  VVKLSQKIKAGLSLDEHKSRLKERLGCEPSDDQVATSLKISRAELRAKIIECSLAREKLT 275

Query: 421  MSNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVS 242
            MSN+RLVMSIAQRYDNMGAEM D            IEKFDSSKGFKISTYVYWWIRQGVS
Sbjct: 276  MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS 335

Query: 241  RALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAV 62
            RALVE+SRTLRLPTHLH+RLSLIRNA+ RLEERGITP+IDRIA+ LNM+ +KVRNATEA+
Sbjct: 336  RALVENSRTLRLPTHLHDRLSLIRNAEYRLEERGITPTIDRIAKCLNMSPKKVRNATEAI 395

Query: 61   SKVFSLDREAYPSLNGLPGE 2
            +KVFS+DREA+PSLNGLPG+
Sbjct: 396  NKVFSIDREAFPSLNGLPGD 415


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
            gi|482570853|gb|EOA35041.1| hypothetical protein
            CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score =  307 bits (787), Expect = 5e-81
 Identities = 177/319 (55%), Positives = 209/319 (65%), Gaps = 1/319 (0%)
 Frame = -3

Query: 955  VDALLLLQKSMLEKQWNLAPEXXXXXXXXXXXXXKSE-IDEVTCSGTSAXXXXXXXXXXR 779
            V+ALLLLQKSMLEK WNL+ E             + + +  +TCSG SA           
Sbjct: 115  VEALLLLQKSMLEKSWNLSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRI------ 168

Query: 778  GGAXXXXDEMMIPQWXXXXXXXXXXXXDGVGLLLLPPHQKXXXXXXGYYVSQQLLTHGEV 599
             GA     +  +                 V    L  H +         +S+ +L+H EV
Sbjct: 169  -GAKK---KTNMTSAKAVSDVSSGKQVRSVMSSELFQHNRVRGGYVKGVISEDVLSHTEV 224

Query: 598  VRLSHKIKAGLALEERRSRLKQRLGCEPSDEXXXXXXXXXXXXXXXXMIECSLAREKLAM 419
            VRLS KIK+GL L++ +SRLK RLGCEPSDE                ++EC LAREKLAM
Sbjct: 225  VRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRAELQAWLMECHLAREKLAM 284

Query: 418  SNIRLVMSIAQRYDNMGAEMPDXXXXXXXXXXXXIEKFDSSKGFKISTYVYWWIRQGVSR 239
            SN+RLVMSIAQRYDN+GAEM D            IEKFDSSKGF+ISTYVYWWIRQGVSR
Sbjct: 285  SNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSR 344

Query: 238  ALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSIDRIAESLNMTERKVRNATEAVS 59
            ALV++SRTLRLPTHLHERL LIRNAK RL+E+GITPSIDRIAESLNM+++KVRNATEAVS
Sbjct: 345  ALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVS 404

Query: 58   KVFSLDREAYPSLNGLPGE 2
            K+FSLDR+A+PSLNGLPGE
Sbjct: 405  KIFSLDRDAFPSLNGLPGE 423