BLASTX nr result
ID: Mentha23_contig00007834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00007834
(582 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 391 e-107
gb|AAS86826.1| RNA polymerase II second largest subunit, partial... 391 e-107
emb|CAD91516.1| RNA polymerase II second largest subunit [Garrya... 391 e-107
emb|CAD89596.1| RNA polymerase II, second largest subunit [Myopo... 390 e-106
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 389 e-106
emb|CAD92461.1| RNA polymerase II [Valeriana officinalis] 389 e-106
emb|CAB43079.1| RNA polymerase II [Peltanthera floribunda] 389 e-106
emb|CAB43061.1| RNA polymerase II [Buddleja asiatica] 389 e-106
emb|CAB43082.1| RNA polymerase II [Retzia capensis] 389 e-106
emb|CAD92662.1| RNA polymerase II [Solanum lycopersicum] 388 e-106
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 388 e-106
gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia... 388 e-106
gb|AFV74912.1| RNA polymerase II second largest subunit, partial... 388 e-106
gb|AFV74906.1| RNA polymerase II second largest subunit, partial... 388 e-106
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 388 e-106
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 387 e-105
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 387 e-105
emb|CAD92665.1| RNA polymerase II [Mimulus guttatus] 387 e-105
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su... 387 e-105
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 387 e-105
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 391 bits (1005), Expect = e-107
Identities = 189/193 (97%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 896 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 955
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 956 KGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1015
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL+SMIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1016 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSR 1075
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1076 GRGPVQILTRQPA 1088
>gb|AAS86826.1| RNA polymerase II second largest subunit, partial [Antirrhinum
majus]
Length = 575
Score = 391 bits (1005), Expect = e-107
Identities = 189/193 (97%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 372 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 431
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 432 KGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 491
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL+SMIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 492 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSR 551
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 552 GRGPVQILTRQPA 564
>emb|CAD91516.1| RNA polymerase II second largest subunit [Garrya elliptica]
Length = 576
Score = 391 bits (1004), Expect = e-107
Identities = 188/193 (97%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 367 GQASRYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 426
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGT+GMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 427 KGTIGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 486
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 487 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 546
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 547 GRGPVQILTRQPA 559
>emb|CAD89596.1| RNA polymerase II, second largest subunit [Myoporum insulare]
Length = 350
Score = 390 bits (1003), Expect = e-106
Identities = 188/193 (97%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 101 GQAARYTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 160
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATP
Sbjct: 161 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATP 220
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 221 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 280
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 281 GRGPVQILTRQPA 293
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 389 bits (1000), Expect = e-106
Identities = 188/193 (97%), Positives = 191/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
G AARYT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 887 GPAARYTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 946
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 947 KGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1006
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL SMIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1007 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSR 1066
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1067 GRGPVQILTRQPA 1079
>emb|CAD92461.1| RNA polymerase II [Valeriana officinalis]
Length = 364
Score = 389 bits (999), Expect = e-106
Identities = 187/193 (96%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 161 GQASRYTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 220
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 221 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 280
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 281 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 340
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 341 GRGPVQILTRQPA 353
>emb|CAB43079.1| RNA polymerase II [Peltanthera floribunda]
Length = 260
Score = 389 bits (998), Expect = e-106
Identities = 188/193 (97%), Positives = 191/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETG VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 11 GQAARYTKRDHSTSLRHSETGTVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 70
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 71 KGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 130
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL SMIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 131 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSR 190
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 191 GRGPVQILTRQPA 203
>emb|CAB43061.1| RNA polymerase II [Buddleja asiatica]
Length = 260
Score = 389 bits (998), Expect = e-106
Identities = 188/193 (97%), Positives = 190/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 9 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 68
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATP
Sbjct: 69 KGTVGMTYTQEDMPWTQEGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATP 128
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 129 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSR 188
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 189 GRGPVQILTRQPA 201
>emb|CAB43082.1| RNA polymerase II [Retzia capensis]
Length = 256
Score = 389 bits (998), Expect = e-106
Identities = 187/193 (96%), Positives = 191/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQAARYTKRDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQ GDKFSSRHGQ
Sbjct: 11 GQAARYTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQXGDKFSSRHGQ 70
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATP
Sbjct: 71 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATP 130
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 131 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 190
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 191 GRGPVQILTRQPA 203
>emb|CAD92662.1| RNA polymerase II [Solanum lycopersicum]
Length = 396
Score = 388 bits (997), Expect = e-106
Identities = 186/193 (96%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 141 GQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 200
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 201 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 260
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 261 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSR 320
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 321 GRGPVQILTRQPA 333
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 388 bits (997), Expect = e-106
Identities = 186/193 (96%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 887 GQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 946
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 947 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1006
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1007 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSR 1066
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1067 GRGPVQILTRQPA 1079
>gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris]
Length = 1087
Score = 388 bits (997), Expect = e-106
Identities = 186/193 (96%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 790 GQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 849
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 850 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 909
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 910 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSR 969
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 970 GRGPVQILTRQPA 982
>gb|AFV74912.1| RNA polymerase II second largest subunit, partial [Schoepfia
jasminodora]
Length = 569
Score = 388 bits (996), Expect = e-106
Identities = 186/193 (96%), Positives = 191/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA RYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 366 GQATRYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 425
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGT+GMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATP
Sbjct: 426 KGTIGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHVGKEGDATP 485
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 486 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 545
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 546 GRGPVQILTRQPA 558
>gb|AFV74906.1| RNA polymerase II second largest subunit, partial [Thesium
chinense]
Length = 566
Score = 388 bits (996), Expect = e-106
Identities = 186/193 (96%), Positives = 193/193 (100%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQ++RYTKRDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 366 GQSSRYTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 425
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 426 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 485
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 486 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSR 545
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 546 GRGPVQILTRQPA 558
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 388 bits (996), Expect = e-106
Identities = 186/193 (96%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 891 GQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 950
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 951 KGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1010
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1011 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSR 1070
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1071 GRGPVQILTRQPA 1083
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 387 bits (994), Expect = e-105
Identities = 189/194 (97%), Positives = 191/194 (98%), Gaps = 1/194 (0%)
Frame = -3
Query: 580 GQA-ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 404
GQA ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 892 GQANARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 951
Query: 403 QKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 224
QKGTVGMTYTQEDMPWTLEGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDAT
Sbjct: 952 QKGTVGMTYTQEDMPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDAT 1011
Query: 223 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHS 44
PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR+L SMIFLGPTYYQRLKHMVDDKIHS
Sbjct: 1012 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHS 1071
Query: 43 RGRGPVQILTRQPA 2
RGRGPVQILTRQPA
Sbjct: 1072 RGRGPVQILTRQPA 1085
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 387 bits (994), Expect = e-105
Identities = 186/193 (96%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQ+ARYT+RDHS SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 911 GQSARYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 970
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 971 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1030
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1031 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSR 1090
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1091 GRGPVQILTRQPA 1103
>emb|CAD92665.1| RNA polymerase II [Mimulus guttatus]
Length = 629
Score = 387 bits (994), Expect = e-105
Identities = 189/194 (97%), Positives = 191/194 (98%), Gaps = 1/194 (0%)
Frame = -3
Query: 580 GQA-ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 404
GQA ARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 372 GQANARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 431
Query: 403 QKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDAT 224
QKGTVGMTYTQEDMPWTLEGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDAT
Sbjct: 432 QKGTVGMTYTQEDMPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDAT 491
Query: 223 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHS 44
PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGR+L SMIFLGPTYYQRLKHMVDDKIHS
Sbjct: 492 PFTDVTVDNISKALHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHS 551
Query: 43 RGRGPVQILTRQPA 2
RGRGPVQILTRQPA
Sbjct: 552 RGRGPVQILTRQPA 565
>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
brachyantha]
Length = 1184
Score = 387 bits (993), Expect = e-105
Identities = 185/193 (95%), Positives = 192/193 (99%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA RYTKRDHSTSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQ
Sbjct: 882 GQATRYTKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 941
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 942 KGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1001
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1002 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSR 1061
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1062 GRGPVQILTRQPA 1074
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 387 bits (993), Expect = e-105
Identities = 186/193 (96%), Positives = 191/193 (98%)
Frame = -3
Query: 580 GQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 401
GQA+RYT+RDHS SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ
Sbjct: 890 GQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949
Query: 400 KGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 221
KGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP
Sbjct: 950 KGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATP 1009
Query: 220 FTDVTVDNISKALHKCGYQMRGYETMYNGHTGRRLASMIFLGPTYYQRLKHMVDDKIHSR 41
FTDVTVDNISKALHKCGYQMRG+ETMYNGHTGRRL +MIFLGPTYYQRLKHMVDDKIHSR
Sbjct: 1010 FTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSR 1069
Query: 40 GRGPVQILTRQPA 2
GRGPVQILTRQPA
Sbjct: 1070 GRGPVQILTRQPA 1082