BLASTX nr result
ID: Mentha23_contig00006173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00006173
(1163 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU44299.1| hypothetical protein MIMGU_mgv1a000432mg [Mimulus... 119 7e-36
ref|XP_006373468.1| nuclear matrix constituent protein 1 [Populu... 48 3e-09
ref|XP_006373467.1| hypothetical protein POPTR_0017s14050g [Popu... 48 3e-09
dbj|BAI67715.1| nuclear matrix constituent protein 1 [Apium grav... 48 2e-07
ref|XP_007139333.1| hypothetical protein PHAVU_008G020600g [Phas... 41 9e-07
ref|XP_004514409.1| PREDICTED: putative nuclear matrix constitue... 43 3e-06
>gb|EYU44299.1| hypothetical protein MIMGU_mgv1a000432mg [Mimulus guttatus]
Length = 1157
Score = 119 bits (298), Expect(3) = 7e-36
Identities = 71/130 (54%), Positives = 83/130 (63%), Gaps = 15/130 (11%)
Frame = +1
Query: 271 SHATVSDSQTEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSVGQVANG 450
S ATVSDSQTEGHS+ I DGDRPKRRQRV +AAEQ+ GQ+RYNLRQ K+SVG NG
Sbjct: 962 SQATVSDSQTEGHSDSIKDGDRPKRRQRV----VAAEQSVGQRRYNLRQPKKSVG-TTNG 1016
Query: 451 PLPHVRKGNEKESDQQPPSKANLSENAEISGSVKGDDDDL---------------VRSTA 585
LP VRKG E ESD+ P +A+ EN G+ + + D+ VRS
Sbjct: 1017 SLPQVRKGKENESDKLPVLEADQYENFVTEGASREEIDECGAAAPLPKRFGGEEPVRSNN 1076
Query: 586 AASEFSADSP 615
ASEFSADSP
Sbjct: 1077 GASEFSADSP 1086
Score = 42.0 bits (97), Expect(3) = 7e-36
Identities = 22/59 (37%), Positives = 24/59 (40%)
Frame = +2
Query: 662 DDFAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGEVSIGKKLWTFLTT 838
DD +SEEVNGT HPG+ SIGKK W FLTT
Sbjct: 1099 DDMVLSEEVNGTAEEGMEYSGEEFKTESEVEEGDNNEDDEVEHPGQASIGKKFWNFLTT 1157
Score = 38.1 bits (87), Expect(3) = 7e-36
Identities = 29/77 (37%), Positives = 40/77 (51%)
Frame = +2
Query: 5 DVEIVDSENGIREAETSQAPSVDQDPSHVPENSQTSNLKIXXXXXXXXXXXXASRTRSGK 184
DV+IV+S++ IR+ E DP + E SQ S+LK RTR+ K
Sbjct: 871 DVQIVESDSAIRKVE---------DPVNTQEYSQKSDLKARRRGPGKGGRP---RTRTVK 918
Query: 185 DDLVAGSKANGDVENAV 235
+V GSK NG+ EN+V
Sbjct: 919 A-VVTGSKTNGNAENSV 934
>ref|XP_006373468.1| nuclear matrix constituent protein 1 [Populus trichocarpa]
gi|550320290|gb|ERP51265.1| nuclear matrix constituent
protein 1 [Populus trichocarpa]
Length = 1156
Score = 48.1 bits (113), Expect(2) = 3e-09
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 271 SHATVSD---SQTEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSVGQV 441
S +VSD +EGHS+ + GDR KRRQ+V Q GQ +YNLR+ + V V
Sbjct: 990 SQISVSDRYGDDSEGHSDSVTAGDRRKRRQKV-----VPNQTQGQTQYNLRRRELGVAVV 1044
Query: 442 ANGPLPHVRKGNEKESDQQPPSKANLSENAEISGSVKGDDDDLVRSTAAASEFSA 606
++ EKE D G D +L+RS AAS +A
Sbjct: 1045 TVKASSNLNNEKEKEDD----------------GVSSPQDGNLLRSAPAASAGAA 1083
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 638 GTKSFTRADD-FAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGEVSIGK 814
G S R D+ A+SEE+NGT HPGEVSIGK
Sbjct: 1104 GDGSARRMDENAALSEEINGTPEGAGEYDDDEEESL---------------HPGEVSIGK 1148
Query: 815 KLWTFLTT 838
KLWTFLTT
Sbjct: 1149 KLWTFLTT 1156
>ref|XP_006373467.1| hypothetical protein POPTR_0017s14050g [Populus trichocarpa]
gi|550320289|gb|ERP51264.1| hypothetical protein
POPTR_0017s14050g [Populus trichocarpa]
Length = 1150
Score = 48.1 bits (113), Expect(2) = 3e-09
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 271 SHATVSD---SQTEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSVGQV 441
S +VSD +EGHS+ + GDR KRRQ+V Q GQ +YNLR+ + V V
Sbjct: 984 SQISVSDRYGDDSEGHSDSVTAGDRRKRRQKV-----VPNQTQGQTQYNLRRRELGVAVV 1038
Query: 442 ANGPLPHVRKGNEKESDQQPPSKANLSENAEISGSVKGDDDDLVRSTAAASEFSA 606
++ EKE D G D +L+RS AAS +A
Sbjct: 1039 TVKASSNLNNEKEKEDD----------------GVSSPQDGNLLRSAPAASAGAA 1077
Score = 41.2 bits (95), Expect(2) = 3e-09
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 638 GTKSFTRADD-FAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGEVSIGK 814
G S R D+ A+SEE+NGT HPGEVSIGK
Sbjct: 1098 GDGSARRMDENAALSEEINGTPEGAGEYDDDEEESL---------------HPGEVSIGK 1142
Query: 815 KLWTFLTT 838
KLWTFLTT
Sbjct: 1143 KLWTFLTT 1150
>dbj|BAI67715.1| nuclear matrix constituent protein 1 [Apium graveolens]
Length = 1171
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 34/108 (31%), Positives = 50/108 (46%)
Frame = +1
Query: 283 VSDSQTEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSVGQVANGPLPH 462
V +E HS+ + G R KRR++V A A RYNLR+ K + VANG
Sbjct: 989 VGADYSEEHSDSVTAGGRQKRRRKVVPAAPAPTG-----RYNLRRHKTAAPLVANGASSD 1043
Query: 463 VRKGNEKESDQQPPSKANLSENAEISGSVKGDDDDLVRSTAAASEFSA 606
KG EKE D + ++ + E+ GS ++ +EFS+
Sbjct: 1044 PNKGKEKEIDDGGSMREDIPD--EVDGSTHLIQVKTLKRIDVVNEFSS 1089
Score = 35.4 bits (80), Expect(2) = 2e-07
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = +2
Query: 665 DFAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPGEVSIGKKLWTFLTT 838
D +SEEVNGT HPGEVSI KK+W FLTT
Sbjct: 1115 DMLLSEEVNGTPEQSREYQNQGDRSGADGEDEDGDDDEVE-HPGEVSISKKVWKFLTT 1171
>ref|XP_007139333.1| hypothetical protein PHAVU_008G020600g [Phaseolus vulgaris]
gi|561012466|gb|ESW11327.1| hypothetical protein
PHAVU_008G020600g [Phaseolus vulgaris]
Length = 1181
Score = 41.2 bits (95), Expect(2) = 9e-07
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Frame = +1
Query: 271 SHATVSDSQ---TEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSV--- 432
S TVS+ +EGHS+ + G R KRRQ+ AA Q G+ RYNLR+ +
Sbjct: 993 SQMTVSEHDGEASEGHSDSVIPGQRKKRRQKAAA---PPAQTAGETRYNLRRPRTGATTS 1049
Query: 433 --------GQVANGPLPHVRKGNEKESDQQPPSKANLSENAEISGSV 549
G+ + G + V+ E+ D + ++ E GSV
Sbjct: 1050 SARATSAGGKESQGEVHRVKDTEEEIVDSKISHSLSVGITNEDGGSV 1096
Score = 39.7 bits (91), Expect(2) = 9e-07
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 635 GGTKSFTRADDFAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HPGEVSI 808
GG + T A++ +SEEVNGT HPGE SI
Sbjct: 1112 GGDTTGTFANNITLSEEVNGTADDAEENDAEYRSESHGEDAGGVEIDDDEDYQHPGEASI 1171
Query: 809 GKKLWTFLTT 838
GKKLW F TT
Sbjct: 1172 GKKLWNFFTT 1181
>ref|XP_004514409.1| PREDICTED: putative nuclear matrix constituent protein 1-like
protein-like [Cicer arietinum]
Length = 1178
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = +1
Query: 298 TEGHSERINDGDRPKRRQRVAAAGIAAEQNPGQKRYNLRQSKRSVGQVANGPLPHVRKGN 477
+EGHS+ + G R KRRQ+ AA Q G+ RYNLR+ K +G + G
Sbjct: 1001 SEGHSDSLIPGQRKKRRQKAAAPA----QTAGETRYNLRRHK--IGATTSSARGMSGGGR 1054
Query: 478 EKESDQQPPSKANLSENAEISGS-------VKGDDDDLVRS 579
E E + A + N++ S S GD DL +S
Sbjct: 1055 ESEGEVGRVKGAGVKTNSKTSRSHSVGIANENGDSIDLDQS 1095
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Frame = +2
Query: 638 GTKSFTRADDFAMSEEVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------HPGE 799
G + T A + A+SEEVNGT HPGE
Sbjct: 1106 GDATRTFASNMALSEEVNGTADNAEDQDAEYRSESHGEDAGQADDDDENEIDEDYQHPGE 1165
Query: 800 VSIGKKLWTFLTT 838
S+GKKLW F TT
Sbjct: 1166 TSVGKKLWKFFTT 1178