BLASTX nr result
ID: Mentha23_contig00005602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00005602
(332 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU18300.1| hypothetical protein MIMGU_mgv1a015614mg [Mimulus... 118 1e-24
ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloro... 85 1e-14
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ... 84 2e-14
ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloro... 82 1e-13
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro... 73 4e-11
gb|EPS61062.1| hypothetical protein M569_13739, partial [Genlise... 72 8e-11
ref|XP_007035202.1| Ribosomal L28 family [Theobroma cacao] gi|50... 72 8e-11
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro... 72 8e-11
ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citr... 71 1e-10
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 70 2e-10
gb|ABK95755.1| unknown [Populus trichocarpa] 70 2e-10
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 70 2e-10
ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloro... 70 3e-10
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro... 69 5e-10
ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arab... 64 2e-08
ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Caps... 64 2e-08
ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloro... 64 3e-08
ref|XP_006857446.1| hypothetical protein AMTR_s00067p00174670 [A... 63 4e-08
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 62 8e-08
ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutr... 62 8e-08
>gb|EYU18300.1| hypothetical protein MIMGU_mgv1a015614mg [Mimulus guttatus]
Length = 151
Score = 118 bits (295), Expect = 1e-24
Identities = 59/89 (66%), Positives = 71/89 (79%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVGRISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPW 243
MATITA++ P MMGV SKSQ+ GR+SLK+S SEIG ++SQLSG+KISTA F+ P
Sbjct: 1 MATITATLGPMMMGVSVSKSQNNGRLSLKTSNTCSEIGSVASQLSGMKISTARFQIRAPA 60
Query: 244 TISAPFRPSLQPVARRICPFTGKKPNKAN 330
+SAP RP+LQPVARR+CP TGKK NKAN
Sbjct: 61 PVSAPLRPALQPVARRVCPLTGKKSNKAN 89
>ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
tuberosum]
Length = 149
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVGRISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPW 243
MATITA I V +++ V + +L K SSE+ F++SQLSGIKIS+ S P
Sbjct: 1 MATITAGISLRGPAVSGNRTFAVTKRALPKLKLSSELSFLTSQLSGIKISSTNL--SSPA 58
Query: 244 TISAPFRPSLQPVARRICPFTGKKPNKAN 330
++S PF+ +LQPVARRICPFTGKK N+AN
Sbjct: 59 SLSVPFKTALQPVARRICPFTGKKSNRAN 87
>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
ribosomal protein L28 precursor, chloroplast - tobacco
gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
ribosomal protein CL28 [Nicotiana tabacum]
Length = 151
Score = 84.3 bits (207), Expect = 2e-14
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVG---RISLKSSKASSEIGFISSQLSGIKISTAAFEKS 234
MAT+ A I S+ G S + R SL SK SSE+ F++SQLSG+KIS+ F S
Sbjct: 1 MATMVAGI--SLRGPVMSSHRTFSVTKRASLPQSKLSSELSFVTSQLSGLKISSTHFISS 58
Query: 235 DPWTISAPFRPSLQPVARRICPFTGKKPNKAN 330
+S PF+PSLQPVARRICPFTGKK N+AN
Sbjct: 59 SA-PLSVPFKPSLQPVARRICPFTGKKSNRAN 89
>ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
lycopersicum]
Length = 149
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/89 (51%), Positives = 60/89 (67%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVGRISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPW 243
MATITA I V ++ V + +L K SSE+ F++SQLSGIKIS+ S P
Sbjct: 1 MATITAGISLRGPVVGGYRTFAVTKRALPKVKFSSELSFVTSQLSGIKISSTHL--SSPA 58
Query: 244 TISAPFRPSLQPVARRICPFTGKKPNKAN 330
++S PF+ +LQPVARR+CPFTGKK N+AN
Sbjct: 59 SLSVPFKTALQPVARRVCPFTGKKSNRAN 87
>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 73.2 bits (178), Expect = 4e-11
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +1
Query: 154 SKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPVARRICPFTGKKPNKAN 330
+K SS++GF++SQLSGI+IS+ S +AP RPSLQPVARRICPFTGKK NK N
Sbjct: 30 TKPSSDLGFLTSQLSGIRISSNHSLISPSSISTAPLRPSLQPVARRICPFTGKKANKKN 88
>gb|EPS61062.1| hypothetical protein M569_13739, partial [Genlisea aurea]
Length = 115
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +1
Query: 172 IGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPVARRICPFTGKKPNKAN 330
+G ISSQ G+KIS + + K P S+P RP LQPVARR CPFTGKKPNKAN
Sbjct: 1 VGSISSQFGGLKISLSRYPKISPLRDSSPSRPCLQPVARRTCPFTGKKPNKAN 53
>ref|XP_007035202.1| Ribosomal L28 family [Theobroma cacao] gi|508714231|gb|EOY06128.1|
Ribosomal L28 family [Theobroma cacao]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +1
Query: 148 KSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPVARRICPFTGKKPNKA 327
K+ +S +GF++SQLSG+KIS + + ISAPF P+L+PVARR+CPFTGKK NKA
Sbjct: 22 KTRPSSQLLGFVTSQLSGVKISYNIPDLAPIKPISAPFTPALRPVARRVCPFTGKKANKA 81
Query: 328 N 330
N
Sbjct: 82 N 82
>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +1
Query: 154 SKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPVARRICPFTGKKPNKAN 330
+K +S++GF++SQLSGI+IS+ S +AP RPSLQPVARRICPFTGKK NK N
Sbjct: 30 TKPNSDLGFLTSQLSGIRISSNHSLISPASISTAPLRPSLQPVARRICPFTGKKANKKN 88
>ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citrus clementina]
gi|557522167|gb|ESR33534.1| hypothetical protein
CICLE_v10006136mg [Citrus clementina]
Length = 154
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVGRISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPW 243
MAT + + +P + + + +K+ +S E+GF++SQLSGIKIS + + + P
Sbjct: 4 MATPGGVLLGNTSNLPFRRPRLSPKSMVKAVSSSEELGFVTSQLSGIKISYSLPDVATPI 63
Query: 244 TISAPFRPSLQP-VARRICPFTGKKPNKAN 330
+ S PF P LQP VARR+CPFTGKK NKAN
Sbjct: 64 S-SRPFAPGLQPIVARRVCPFTGKKSNKAN 92
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 139 ISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPV-ARRICPFTGKK 315
IS S + SEIGF++SQLSGI+IS + P +SAPF P+LQPV ARRICPFTGKK
Sbjct: 32 ISKTSLVSVSEIGFVTSQLSGIRISY-----NPPKPLSAPFSPALQPVIARRICPFTGKK 86
Query: 316 PNKAN 330
N+AN
Sbjct: 87 ANRAN 91
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 139 ISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPV-ARRICPFTGKK 315
IS S + SEIGF++SQLSGI+IS + P +SAPF P+LQPV ARRICPFTGKK
Sbjct: 29 ISKTSLVSVSEIGFVTSQLSGIRISY-----NPPKPLSAPFSPALQPVIARRICPFTGKK 83
Query: 316 PNKAN 330
N+AN
Sbjct: 84 ANRAN 88
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 139 ISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQPV-ARRICPFTGKK 315
IS S + SEIGF++SQLSGI+IS + P +SAPF P+LQPV ARRICPFTGKK
Sbjct: 32 ISKTSLVSVSEIGFVTSQLSGIRISY-----NPPEPLSAPFSPALQPVIARRICPFTGKK 86
Query: 316 PNKAN 330
N+AN
Sbjct: 87 ANRAN 91
>ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Citrus
sinensis]
Length = 154
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 64 MATITASIRPSMMGVPASKSQHVGRISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPW 243
MAT + + +P + + + +K +S E+GF++SQLSGIKIS + + P
Sbjct: 4 MATPGGVLLGNTSNLPCRRPRLSPKSMVKVVSSSEELGFVTSQLSGIKISYRLPDVATPI 63
Query: 244 TISAPFRPSLQP-VARRICPFTGKKPNKAN 330
+ S PF P LQP VARR+CPFTGKK NKAN
Sbjct: 64 S-SRPFAPGLQPIVARRVCPFTGKKSNKAN 92
>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
vinifera]
Length = 146
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 103 GVPASKSQHVGRI-SLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQP 279
G+ S H R+ SLK +K +S++ F++SQ GIKIS + +P SAP L+P
Sbjct: 9 GLVVCNSSHKLRLPSLKKAKMASDLAFVTSQFGGIKISCTHLQLPNPIP-SAPLTLPLRP 67
Query: 280 VARRICPFTGKKPNKAN 330
VARR+CPFTGKK NKAN
Sbjct: 68 VARRVCPFTGKKANKAN 84
>ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297325292|gb|EFH55712.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 148 KSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQP-VARRICPFTGKKPNK 324
KS+ S E+GF++SQLSG++IS A + + IS P P +QP VARRICPFTGKK N+
Sbjct: 22 KSTVTSKELGFLTSQLSGVRISHAPSDVIN--RISVPSFPGIQPIVARRICPFTGKKANR 79
Query: 325 AN 330
AN
Sbjct: 80 AN 81
>ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Capsella rubella]
gi|482563829|gb|EOA28019.1| hypothetical protein
CARUB_v10024195mg [Capsella rubella]
Length = 166
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 148 KSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQP-VARRICPFTGKKPNK 324
KS+ S E+GF++SQLSG++IS A + + IS P P +QP VARRICPFTGKK N+
Sbjct: 45 KSTVTSKELGFLTSQLSGLRISHAPTDVIN--RISVPSFPGIQPIVARRICPFTGKKANR 102
Query: 325 AN 330
AN
Sbjct: 103 AN 104
>ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 150
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 136 RISLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQP-VARRICPFTGK 312
R+S K+ +A S++GF++SQLSG+KIS + P I P P LQP VARRICPFTGK
Sbjct: 25 RLSSKT-QAVSDVGFVTSQLSGLKISHDMSSQL-PSPIFTPSLPGLQPIVARRICPFTGK 82
Query: 313 KPNKAN 330
K NKAN
Sbjct: 83 KANKAN 88
>ref|XP_006857446.1| hypothetical protein AMTR_s00067p00174670 [Amborella trichopoda]
gi|548861539|gb|ERN18913.1| hypothetical protein
AMTR_s00067p00174670 [Amborella trichopoda]
Length = 162
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +1
Query: 103 GVPASKSQHVGRISLKSSK------ASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFR 264
G P + S ++S+ SK SE+GF SSQLSGI IS F ++ +S +R
Sbjct: 22 GAPFNHSSSFSKVSMNHSKFVLPISKRSELGFSSSQLSGIGIS---FGETLRGAVSTTYR 78
Query: 265 PSLQPVARRICPFTGKKPNKAN 330
+QPVARR+C FTGKK N+AN
Sbjct: 79 RMIQPVARRVCRFTGKKANRAN 100
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 148 KSSKASSEIGFISSQLSGIKISTAAFEKSDPWTISAPFRPSLQP-VARRICPFTGKKPNK 324
KS+ S E+GF++SQLSG++IS + + IS P P +QP VARRICPFTGKK N+
Sbjct: 22 KSTVTSKELGFLTSQLSGLRISYTPSDVIN--RISLPSFPGIQPIVARRICPFTGKKANR 79
Query: 325 AN 330
AN
Sbjct: 80 AN 81
>ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutrema salsugineum]
gi|557111658|gb|ESQ51942.1| hypothetical protein
EUTSA_v10017390mg [Eutrema salsugineum]
Length = 142
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Frame = +1
Query: 142 SLKSSKASSEIGFISSQLSGIKISTAAFEKSDPWT-ISAPFRPSLQP-VARRICPFTGKK 315
S KS S+E+GF++SQLSG++IS SD + IS P P LQP VARRICPFTGKK
Sbjct: 18 SPKSVAKSTELGFLTSQLSGVRISHGP--PSDVISRISVPSFPGLQPIVARRICPFTGKK 75
Query: 316 PNKAN 330
N+AN
Sbjct: 76 ANRAN 80