BLASTX nr result
ID: Mentha23_contig00005222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00005222
(1493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 272 e-108
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 265 e-102
emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera] 263 e-102
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 259 2e-99
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 258 9e-99
emb|CAN77568.1| hypothetical protein VITISV_010611 [Vitis vinifera] 257 9e-99
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 260 3e-98
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 275 3e-95
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 276 2e-94
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 247 1e-93
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 265 7e-93
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] 243 2e-92
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 264 2e-92
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni... 265 3e-92
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 262 3e-92
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 265 4e-92
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 264 6e-92
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group] 264 6e-92
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group] 264 6e-92
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group] 264 6e-92
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 272 bits (695), Expect(2) = e-108
Identities = 129/232 (55%), Positives = 168/232 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G + KVC+L SLYGLK AP QW+EK N +L GF N ++ C+Y++ + V+ICLY
Sbjct: 906 GQKEKVCKLLKSLYGLKQAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIICLY 965
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLIFGTC DIV +TK +L S F+MKD+GEA VILG+K++R LSQ Y E++L
Sbjct: 966 VDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTEKLL 1025
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
KF D V T YD++ LKKN G+ +SQ QYA+I+GS+++L + +RPDIAYAV RLS
Sbjct: 1026 KKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAVGRLS 1085
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R T PS++HW+AL RLMKYL+GT D + YS FP V+EGY DANW+SD D+
Sbjct: 1086 RCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDSDE 1137
Score = 148 bits (374), Expect(2) = e-108
Identities = 67/132 (50%), Positives = 99/132 (75%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAV+W+ + T IA STMESEF+A+E+A EA+WL+ LA+IPLG + +S+H D
Sbjct: 1148 LGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCD 1207
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
QSAI++ KN YNGK RHI+++H V+++++ G IS+D+V++ER+LADP TKPL ++ +
Sbjct: 1208 CQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRKMI 1267
Query: 404 EELGAGIGMKNL 369
E G+G+K L
Sbjct: 1268 LETSRGMGLKPL 1279
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 265 bits (677), Expect(2) = e-102
Identities = 126/232 (54%), Positives = 168/232 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVC+L SLYGLK AP QW+EKF + IL +GF N ++ CLY+K +++CLY
Sbjct: 731 GNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSBGFRHNNADKCLYSKTCBDYMIIVCLY 790
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI + ++ETK +LSSTF MKDLGE D ILGIK+ R +GG+ L+Q+HYIE+V+
Sbjct: 791 VDDMLILSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVV 850
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
SKF+ + T +DSSI L+KNDG V+Q +YA +GS+MY CTR DI++AVS+LS
Sbjct: 851 SKFSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLS 910
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R+T PS EHW A+ R++ YL+ TK+L L YS FP ++EGY DA+W+S D
Sbjct: 911 RFTSNPSVEHWKAIGRVLSYLRNTKELSLQYSKFPAIIEGYSDASWISSVGD 962
Score = 136 bits (343), Expect(2) = e-102
Identities = 66/132 (50%), Positives = 92/132 (69%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW K TCI+ STME+EFIA+ EA+WLR+L+ DIP + + +S+H D
Sbjct: 973 LGGGAVSWGSKKQTCISHSTMEAEFIALAATRKEAEWLRDLMMDIPFTANNVSTVSIHCD 1032
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
SQ+ ++ + VYNGK RHI ++H VR++I++G+IS+ FVR+ NLADPFTKPL + V
Sbjct: 1033 SQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLV 1092
Query: 404 EELGAGIGMKNL 369
G+G+K L
Sbjct: 1093 RITSRGMGLKLL 1104
>emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
Length = 1136
Score = 263 bits (673), Expect(2) = e-102
Identities = 128/232 (55%), Positives = 167/232 (71%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVC+L SLYGLK AP QW+EKF + IL +GF N + CLY+K V++CLY
Sbjct: 762 GNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLY 821
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI + ++ETK +LSSTF MKDLGE D ILGIK+ R +GG+ L+Q+HYIE+V+
Sbjct: 822 VDDMLILSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVV 881
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
SKF+ + T +DSSI L+KNDG V+Q +YA +GS+MY CTR DI++AVS+LS
Sbjct: 882 SKFSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLS 941
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R+T PS EHW A+ R++ YLK TK+L L YS FP ++EGY DA+W+S D
Sbjct: 942 RFTSNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGD 993
Score = 137 bits (344), Expect(2) = e-102
Identities = 66/132 (50%), Positives = 92/132 (69%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW K TCI+ STME+EFIA+ EA+WLR+L+ DIP + + +S+H D
Sbjct: 1004 LGGGAVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCD 1063
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
SQ+ ++ + VYNGK RHI ++H VR++I++G+IS+ FVR+ NLADPFTKPL + V
Sbjct: 1064 SQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLV 1123
Query: 404 EELGAGIGMKNL 369
G+G+K L
Sbjct: 1124 RITSRGMGLKLL 1135
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 259 bits (663), Expect(2) = 2e-99
Identities = 123/232 (53%), Positives = 165/232 (71%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF N +L +GF +N + C+Y K V++CLY
Sbjct: 941 GQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLY 1000
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI G+ ++ TK L+S FDMKD+G ADVILGIK+ RT+ LSQSHY++++L
Sbjct: 1001 VDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSNELILSQSHYVDKIL 1060
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
KF+ + RT D ++HL KN G+ VSQ +Y+RI+GS+MYL +CTRPDIAYAV +LS
Sbjct: 1061 GKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLS 1120
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
RYT P +HW + R++KYL+ T+D L Y+ +P V+EGY DANW+S+ D
Sbjct: 1121 RYTSNPGAKHWQGIIRVLKYLRFTRDYXLHYTRYPAVLEGYSDANWISNVKD 1172
Score = 132 bits (331), Expect(2) = 2e-99
Identities = 65/130 (50%), Positives = 89/130 (68%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L G AVSWK K T IA STMESEFIA++ EA+WLR L DIP + PI +H D
Sbjct: 1183 LGGAAVSWKSSKQTVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCD 1242
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
SQSAI ++++YNGK RHIR +H +R+++ GVIS+D+V+++ N+ADP TK L + V
Sbjct: 1243 SQSAIGRAQSNMYNGKSRHIRRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELV 1302
Query: 404 EELGAGIGMK 375
E+ G+ +K
Sbjct: 1303 EKSSXGMXLK 1312
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 258 bits (660), Expect(2) = 9e-99
Identities = 125/232 (53%), Positives = 165/232 (71%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVC+L SLYGLK AP QW+EKF + IL +GF N + CLY+K V++CLY
Sbjct: 938 GNENKVCKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLY 997
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI + ++ETK +LS TF MKDL E D ILGIK+ R +GG+ L+Q+HYIE+V+
Sbjct: 998 VDDMLILSDDMXGIIETKRFLSXTFKMKDLXEVDTILGIKVKRNSGGYALNQTHYIEKVV 1057
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
SKF+ + T +DSSI L+KN+G V+Q +YA +GS+MY CTR DI++AVS+LS
Sbjct: 1058 SKFSHLKIKDANTPFDSSIKLEKNBGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLS 1117
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R+T PS EHW A+ R++ YLK TK+L L YS FP ++EGY DA+W+S D
Sbjct: 1118 RFTSNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGD 1169
Score = 130 bits (328), Expect(2) = 9e-99
Identities = 61/117 (52%), Positives = 85/117 (72%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW K TCI+ STME+EFIA+ EA+WLR+L+ DIP + + +S+H D
Sbjct: 1180 LGGGAVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCD 1239
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVK 414
SQ+ ++ + VYNGK RHI ++H VR++I++G+IS+ FVR+ NLADPFTKPL +
Sbjct: 1240 SQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTR 1296
>emb|CAN77568.1| hypothetical protein VITISV_010611 [Vitis vinifera]
Length = 1067
Score = 257 bits (657), Expect(2) = 9e-99
Identities = 126/232 (54%), Positives = 165/232 (71%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVC+L SLYGLK AP Q +EKF + IL +GF N + CLY+K V++CLY
Sbjct: 693 GNENKVCKLVKSLYGLKQAPKQXHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLY 752
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI + ++ETK +LSSTF MKDLGE D ILGIK+ R +GG+ L+Q+HYIE+V+
Sbjct: 753 VDDMLILSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVV 812
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
SKF+ + T +DSSI L+KNDG V+Q +YA +GS+MY CTR DI++AVS+LS
Sbjct: 813 SKFSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLS 872
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R+ PS EHW A+ R++ YLK TK+L L YS FP ++EGY DA+W+S D
Sbjct: 873 RFISNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPXIJEGYSDASWISSVXD 924
Score = 132 bits (331), Expect(2) = 9e-99
Identities = 63/132 (47%), Positives = 90/132 (68%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GG VSW K TCI+ STME+EFIA+ E +WL++L+ DIP + + +S+H D
Sbjct: 935 LGGGVVSWGSKKQTCISHSTMEAEFIALAATGKEVEWLKDLMMDIPFTANNVSTVSIHCD 994
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
SQ+ ++ + VYNGK RHI ++H VR++I++GVIS+ FVR+ NLADPFTKPL + +
Sbjct: 995 SQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGVISISFVRSSGNLADPFTKPLARDLL 1054
Query: 404 EELGAGIGMKNL 369
G+G+K L
Sbjct: 1055 RITSRGMGLKLL 1066
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 260 bits (664), Expect(2) = 3e-98
Identities = 124/232 (53%), Positives = 166/232 (71%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF N +L +GF +N + C+Y K V++CLY
Sbjct: 902 GQEKKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLY 961
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI G+ ++ TK L+S FDMKD+G ADVILGIK+ RT+ LSQSHY++++L
Sbjct: 962 VDDMLIVGSDDKMITSTKNMLNSRFDMKDMGLADVILGIKIKRTSBELILSQSHYVDKIL 1021
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
KF+ + RT D ++HL KN G+ VSQ +Y+RI+GS+MYL +CTRPDIAYAVS+LS
Sbjct: 1022 GKFDKDNSGVARTPVDVTLHLSKNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVSKLS 1081
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
RYT P +HW + R++KYL+ T+D L Y+ +P V+EGY DANW+S+ D
Sbjct: 1082 RYTSNPGAKHWQGIIRVLKYLRFTRDYGLHYTRYPAVLEGYSDANWISNVKD 1133
Score = 127 bits (319), Expect(2) = 3e-98
Identities = 63/130 (48%), Positives = 87/130 (66%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L G AVSWK K IA STMESEFIA++ EA+WLR L DIP + PI +H D
Sbjct: 1144 LGGAAVSWKSSKQXVIARSTMESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCD 1203
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
SQSAI ++++YNGK RHI +H +R+++ GVIS+D+V+++ N+ADP TK L + V
Sbjct: 1204 SQSAIGRAQSNMYNGKSRHIXRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELV 1263
Query: 404 EELGAGIGMK 375
E+ G+ +K
Sbjct: 1264 EKSSRGMXLK 1273
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 275 bits (704), Expect(2) = 3e-95
Identities = 135/234 (57%), Positives = 175/234 (74%), Gaps = 1/234 (0%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVCRL SLYGLK AP QW+EKF NT+ GFVVN S++C+Y + G +SV++CLY
Sbjct: 904 GQENKVCRLIKSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVMLCLY 963
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVR-TNGGFGLSQSHYIEQV 1135
VDD+LIFG+ L+++ E K LSS F+MKDLGEADVIL IKLVR +GG L QSHY+E+V
Sbjct: 964 VDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVRKADGGVTLLQSHYVEKV 1023
Query: 1134 LSKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRL 955
LS+F SD P T YD S+ L+KN Q Y++I+GS+MYL + TRPDI+YAVS+L
Sbjct: 1024 LSRFGFSDCDPAPTPYDPSVLLRKNRRIARDQLTYSQIIGSLMYLASATRPDISYAVSKL 1083
Query: 954 SRYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
SR+ KP +HW AL R+++YLKGT + Y+ P+V+EGYCDANW+SD D++
Sbjct: 1084 SRFVSKPGDDHWCALERVLRYLKGTMTYGIHYTGNPKVLEGYCDANWISDADEL 1137
Score = 102 bits (253), Expect(2) = 3e-95
Identities = 54/129 (41%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = -1
Query: 758 GGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYDSQ 579
GGAVSWK K T + STME+E A++ A EA+WLR+ L D+P+ ++ IS++ D+Q
Sbjct: 1149 GGAVSWKSCKQTILTKSTMEAELAALDTAGAEAEWLRDFLLDLPVVEKPIPAISMNCDNQ 1208
Query: 578 SAISVVKNSVYNGKK-RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVE 402
+ I+ V +S N K RH++ + VR++ GVI++D+V T NLAD FTK L + +E
Sbjct: 1209 TVITKVNSSRNNMKSTRHVKRRLKSVRKLKNSGVITVDYVHTSNNLADQFTKGLSRNVIE 1268
Query: 401 ELGAGIGMK 375
+GM+
Sbjct: 1269 SASREMGMR 1277
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 276 bits (705), Expect(2) = 2e-94
Identities = 129/233 (55%), Positives = 173/233 (74%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E+KVCRL SLYGLK AP QW+EKF+NT+ GF VN ++ C+Y + G V++CLY
Sbjct: 935 GQESKVCRLIKSLYGLKQAPRQWHEKFNNTLTTAGFCVNEADKCVYYRFSGGKGVIMCLY 994
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+ ++ETK +LS FDMKDLGEADVIL IKL++ G LSQSHY+E+V+
Sbjct: 995 VDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNIKLIKGEDGITLSQSHYVEKVM 1054
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D PV T YD S L K +G+ V+Q Y++I+GS+MYL++ TRPDI+YAV RL+
Sbjct: 1055 TRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIGSLMYLSSATRPDISYAVCRLA 1114
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
RY+ P HW ALYR+++YLKG +L + Y+ FP V+EG+ DANW+SD D +
Sbjct: 1115 RYSASPGDRHWVALYRVLRYLKGAMNLGIKYTGFPSVLEGFSDANWISDSDQM 1167
Score = 99.0 bits (245), Expect(2) = 2e-94
Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K + ST E+E +A++ A+ EA+WLR+LL+D+P+ + + ++ D
Sbjct: 1177 LAGGAVSWRSSKQSVSTRSTKEAELVALDSAALEAEWLRDLLSDLPMLAKPIPAVLVYCD 1236
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+ S + V + N K RHIR + R E GVI++D++++ERNLADPFTK L ++
Sbjct: 1237 NTSVLLKVNSRKDNQKSSRHIRRRLDSCRHARETGVITVDYIKSERNLADPFTKGLAQKP 1296
Query: 407 VEELGAGIGM 378
++ G+G+
Sbjct: 1297 IQAACMGMGL 1306
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 247 bits (630), Expect(2) = 1e-93
Identities = 122/232 (52%), Positives = 160/232 (68%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVC+L SLYGLK P QW+EK + IL +GF N + CLY+K V++CLY
Sbjct: 875 GNENKVCKLVKSLYGLKQDPKQWHEKXDHXILSDGFRHNNVDKCLYSKTCDDYMVIVCLY 934
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI + ++ETK +LSSTF MKDLGE D ILGIK+ R + G+ L+Q+HYIE+V+
Sbjct: 935 VDDMLILSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSEGYALNQTHYIEKVV 994
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
SKF+ + T +DSSI L+KNDG V+Q +YA +GS+MY CTR DI++AVS+LS
Sbjct: 995 SKFSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLS 1054
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
R+ EHW A+ R++ YLK TK+L L YS FP ++EGY DA W+S D
Sbjct: 1055 RFISNLRVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDARWISSVGD 1106
Score = 125 bits (314), Expect(2) = 1e-93
Identities = 59/121 (48%), Positives = 85/121 (70%)
Frame = -1
Query: 731 K*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYDSQSAISVVKNS 552
K TCI+ STME+EFIA+ EA+WLR+L+ DIP + + +S+H DSQ+ ++ +
Sbjct: 1115 KQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCDSQATLARAYSG 1174
Query: 551 VYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMKN 372
VYNGK RHI ++H VR++I++G+IS+ FVR+ NLADPFTKPL + V G+G+K
Sbjct: 1175 VYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLVRITSRGMGLKL 1234
Query: 371 L 369
L
Sbjct: 1235 L 1235
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 265 bits (677), Expect(2) = 7e-93
Identities = 123/233 (52%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTFAGFAVNEADKCVYYRHGGGEGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT ++++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1160
Score = 104 bits (260), Expect(2) = 7e-93
Identities = 55/137 (40%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V NS N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMKNLYGES 357
++ +G++ + ++
Sbjct: 1290 IDNASKEMGLRPISNDA 1306
>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 243 bits (621), Expect(2) = 2e-92
Identities = 120/232 (51%), Positives = 156/232 (67%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G ENKVCRL SLYGLK AP QW+E+F T+ GF N ++ C+Y K +V+ICLY
Sbjct: 985 GQENKVCRLIKSLYGLKQAPKQWHERFDTTVTAFGFRHNSADRCIYTKCEPGYTVVICLY 1044
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDDMLI T L+ + ETK YLS F MKDLGE D ILGIK+ R LSQSHYIE++L
Sbjct: 1045 VDDMLIISTHLEGISETKKYLSLNFKMKDLGEVDTILGIKVKRAGSQISLSQSHYIEKIL 1104
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
+KF ++ T +D S+ L N G V+Q +YA +GS+MY T+CTRPDIA+AVS+LS
Sbjct: 1105 TKFQHLNIKEFNTPFDPSVKLNVNSGRAVAQLEYASAIGSMMYATHCTRPDIAFAVSKLS 1164
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDD 796
+YT P EHW A+ R++ YLK T +L L Y+ ++EGY DA+W+ +D
Sbjct: 1165 QYTVNPGTEHWKAVGRVLGYLKRTSNLELTYTSSSRILEGYSDASWIDRTND 1216
Score = 125 bits (313), Expect(2) = 2e-92
Identities = 63/130 (48%), Positives = 86/130 (66%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW K TCIA STME+E IA+ A EA+W+R+LL DI L I ++ D
Sbjct: 1227 LAGGAVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPMYCD 1286
Query: 584 SQSAISVVKNSVYNGKKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQV 405
S++ +S V N+VYNG RHI ++H VR+++E G I + +V+T +NLADPFTKPL + V
Sbjct: 1287 SEATLSKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKTSKNLADPFTKPLTRDLV 1346
Query: 404 EELGAGIGMK 375
+G+K
Sbjct: 1347 VNTARDMGLK 1356
>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 264 bits (675), Expect(2) = 2e-92
Identities = 123/233 (52%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT ++++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1160
Score = 104 bits (259), Expect(2) = 2e-92
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V NS N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1290 IDNASKEMGLR 1300
>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 265 bits (677), Expect(2) = 3e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1160
Score = 102 bits (254), Expect(2) = 3e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1290 IDNASKEMGLR 1300
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 262 bits (670), Expect(2) = 3e-92
Identities = 122/233 (52%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E+KVC+L SLYGLK AP QW+EKF T+ GF +N ++ C+Y + G + V++CLY
Sbjct: 890 GQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAINEADRCVYYRCGGGEGVILCLY 949
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT +D++ E K++LS +FDMKDLGEADVIL IKL++ +GG LSQSHY+E+VL
Sbjct: 950 VDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSHYVEKVL 1009
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
+F S+ P T YD S+ L+KN + Q +Y++I+GS+MYL TRPDI++AVS+LS
Sbjct: 1010 KRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISFAVSKLS 1069
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+ P +HW AL R+M+YL+GT + YS V+EGY D+NW+SD D++
Sbjct: 1070 RFMSNPGTDHWHALERVMRYLQGTMSYGIHYSGQHAVLEGYSDSNWISDADEL 1122
Score = 105 bits (261), Expect(2) = 3e-92
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = -1
Query: 758 GGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYDSQ 579
GGAVSW+ K T + STME+E A++ A+ EA+WLRELL D+P+ ++ I ++ D+Q
Sbjct: 1134 GGAVSWRSCKQTILTRSTMEAELAALDTATVEAEWLRELLMDLPVVEKPIPAILMNCDNQ 1193
Query: 578 SAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVE 402
+ I+ V +S NGK RH++ + VR++ GVIS+ ++ T++NLADPFTK L + +E
Sbjct: 1194 TVIAKVTSSKDNGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLADPFTKGLPRNVIE 1253
Query: 401 ELGAGIGMK 375
+GM+
Sbjct: 1254 IASREMGMR 1262
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 265 bits (677), Expect(2) = 4e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVDEI 1160
Score = 102 bits (253), Expect(2) = 4e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKLVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1290 IDNASKEMGLR 1300
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 264 bits (675), Expect(2) = 6e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 1144 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 1203
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 1204 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1263
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1264 NRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1323
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1324 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1376
Score = 102 bits (254), Expect(2) = 6e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1386 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1445
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1446 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1505
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1506 IDNASKEMGLR 1516
>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 264 bits (675), Expect(2) = 6e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 1017 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 1076
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 1077 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1136
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1137 NRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1196
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1197 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1249
Score = 102 bits (254), Expect(2) = 6e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1259 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1318
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1319 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1378
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1379 IDNASKEMGLR 1389
>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 264 bits (675), Expect(2) = 6e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGKGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN+ +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERIMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1160
Score = 102 bits (254), Expect(2) = 6e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1290 IDNASKEMGLR 1300
>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 264 bits (675), Expect(2) = 6e-92
Identities = 124/233 (53%), Positives = 170/233 (72%)
Frame = -3
Query: 1491 GMENKVCRLKISLYGLKHAPIQWYEKFHNTILLNGFVVNGSESCLYAKIRGSDSVLICLY 1312
G E KVC+L SLYGLK AP QW+EKF T+ GF VN ++ C+Y + G + V++CLY
Sbjct: 928 GQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLY 987
Query: 1311 VDDMLIFGTCLDIVVETKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVL 1132
VDD+LIFGT L+++ E K++LS FDMKDLG ADVIL IKL+R G L QSHY+E++L
Sbjct: 988 VDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKIL 1047
Query: 1131 SKFNCSDLVPVRTTYDSSIHLKKNDGDVVSQEQYARILGSVMYLTNCTRPDIAYAVSRLS 952
++F D P T YD S+ L+KN +Q +Y++I+GS+MYL + TRPDI++AVS+LS
Sbjct: 1048 NRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLS 1107
Query: 951 RYTHKPSKEHWDALYRLMKYLKGTKDLCLLYSHFPEVMEGYCDANWVSDCDDV 793
R+T P +HW AL R+M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++
Sbjct: 1108 RFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEI 1160
Score = 102 bits (254), Expect(2) = 6e-92
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = -1
Query: 764 LVGGAVSWKLGK*TCIASSTMESEFIAMELASHEAKWLRELLADIPLGKRSDAPISLHYD 585
L GGAVSW+ K T + STME+E A++ A+ EA+WLR+LL D+P+ ++ I ++ D
Sbjct: 1170 LGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCD 1229
Query: 584 SQSAISVVKNSVYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQ 408
+Q+ I V +S N K RH++ + VR++ GVI+LD+++T RNLADPFTK L +
Sbjct: 1230 NQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNV 1289
Query: 407 VEELGAGIGMK 375
++ +G++
Sbjct: 1290 IDNASKEMGLR 1300