BLASTX nr result

ID: Mentha23_contig00002822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00002822
         (461 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354080.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g...    57   3e-06
ref|XP_004238507.1| PREDICTED: putative F-box/LRR-repeat protein...    56   6e-06

>ref|XP_006354080.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g52680-like [Solanum
           tuberosum]
          Length = 436

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
 Frame = -1

Query: 419 DEVDYCVPKCLYSCSSLQKLSLICSGLEIKGNVQWNRLKNLKIECFALNQHDIDQILCGS 240
           D   + +P  + +CSSL  L   C  ++ +  +QW  LK+LK+    ++  D+ +IL G 
Sbjct: 127 DNFTFELPISICTCSSLITLDWSCCAIDKESVIQWKSLKSLKLNYVFIDNDDLAKILSGC 186

Query: 239 PLLXXXXXXXXXXXXXXXXXXXXXXLKKLSIYQICNDPGNADSVLRIWTPNLVMLTISGE 60
           P L                      LK+LS+       G AD  L I  P L  L ISG+
Sbjct: 187 PAL--ETLELSLFEGFRRLEITSSNLKRLSLGSYWWFYGRADEPLEIIAPYLQHLEISGD 244

Query: 59  -QFDNCLLMNVSSLARANL 6
             +  C L+NVSSL  A L
Sbjct: 245 LDYLKCKLVNVSSLVTATL 263


>ref|XP_004238507.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like
           [Solanum lycopersicum]
          Length = 349

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
 Frame = -1

Query: 452 DIWFLAMDFDPDEVDYCVPKCLYSCSSLQKLSLICSGLEIKGNVQWNRLKNLKIECFALN 273
           +I  L+  ++ D +D  +P  +Y CSSL  L L C  L+ +  ++W  LK L++    L+
Sbjct: 158 NIILLSDSYENDSID--LPDTIYKCSSLITLDLTCCILDKEIVIEWKSLKTLRLNDITLD 215

Query: 272 QHDIDQILCGSPLLXXXXXXXXXXXXXXXXXXXXXXLKKLSIYQICNDPGNADSVLRIWT 93
              I  IL G P L                      LK+L      +   + D  L I+ 
Sbjct: 216 DDRIVNILSGCPAL--EILEFLEFSGFRHMEISSSNLKRLKFKNHLSYDNSDDLSLDIFA 273

Query: 92  PNLVMLTISGEQFD-NCLLMNVSSLARANL 6
           P++  L ISG  +D  C L+NVSSL    L
Sbjct: 274 PHVQHLEISGYMYDLRCRLVNVSSLVSVKL 303


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