BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00002716
         (741 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44151.1| hypothetical protein MIMGU_mgv1a003236mg [Mimulus...   197   5e-71
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   181   2e-63
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-62
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   170   4e-62
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   165   9e-62
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     174   2e-60
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   174   2e-60
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   169   5e-60
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   169   2e-59
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   167   9e-59
ref|XP_007217279.1| hypothetical protein PRUPE_ppa017633mg [Prun...   168   3e-58
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   169   7e-58
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   154   9e-58
ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containi...   160   5e-57
ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-56
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   149   2e-56
gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japo...   159   3e-56
ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group] g...   159   3e-56
gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sat...   159   3e-56
dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]    155   4e-56

>gb|EYU44151.1| hypothetical protein MIMGU_mgv1a003236mg [Mimulus guttatus]
          Length = 598

 Score =  197 bits (501), Expect(2) = 5e-71
 Identities = 98/170 (57%), Positives = 118/170 (69%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWNAIL GYVKAG M TA +  EKM SRDVVSWSTVISGYA+ GDI+MA
Sbjct: 204 LFDEMPERDRVSWNAILDGYVKAGEMRTAYQIFEKMPSRDVVSWSTVISGYAKAGDIDMA 263

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           K LFD +P K+LV+WTIMISSYAE+G  K+A  LY +ME +                   
Sbjct: 264 KVLFDSMPAKNLVTWTIMISSYAEKGNGKEAVGLYHRMEGEKLRPDDTSFVSILSASAES 323

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GK++H++I ++ Y  ST +NNAL+DMYCKCGSLN+A   FN +ER
Sbjct: 324 GLLGLGKKVHQSITKTSYKCSTLVNNALVDMYCKCGSLNRAWSIFNSIER 373



 Score = 97.8 bits (242), Expect(2) = 5e-71
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 QRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIR 673
           ++D      MIHGLA   HGK AL LF+ M+ E   P+ VT + VLSAC+H+GL++DGI 
Sbjct: 373 RKDLISWNAMIHGLAMHGHGKNALQLFDRMKREGFEPDKVTFVAVLSACSHSGLVKDGIH 432

Query: 674 YFYTMESNYNITPQIEHYGCMI 739
           +FY+MES+Y I P+IEHYGCMI
Sbjct: 433 HFYSMESDYEIAPEIEHYGCMI 454



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 27/91 (29%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+  +      M  RD+V+++++ISG  + G+++ A+ LFD++PE+D
Sbjct: 153 NSLIDAYSKCGLTGLEESKTLFGVMSERDLVTYNSMISGLVKAGELKEARKLFDEMPERD 212

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  Y + G  + A+ ++++M  ++
Sbjct: 213 RVSWNAILDGYVKAGEMRTAYQIFEKMPSRD 243


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  181 bits (460), Expect(2) = 2e-63
 Identities = 91/170 (53%), Positives = 114/170 (67%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN IL GYVKAG M+ A +  EKM +R+VVSWST++ GY++ GD++MA
Sbjct: 205 LFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMA 264

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LV WTIMIS YAE+GLAKDA  LY+QME+                    
Sbjct: 265 RILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVS 324

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GKR+H +I R+R+  ST ++NALIDMY KCGSL  A   F+ M R
Sbjct: 325 GLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVR 374



 Score = 88.6 bits (218), Expect(2) = 2e-63
 Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 491 MFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDG 667
           M ++D      +I GLA   HG+KAL LF  M+ E   P+ VT +GVL AC HAG +++G
Sbjct: 372 MVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEG 431

Query: 668 IRYFYTMESNYNITPQIEHYGCMI 739
           + YF+ ME +Y + P++EHYGCM+
Sbjct: 432 LHYFHAMERDYGVPPEVEHYGCMV 455



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G++ A K  E M  RD VSW+++I G  + G++  A+ LFD++PE+D
Sbjct: 154 NSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERD 213

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  Y + G    A  L+++M  +N
Sbjct: 214 TVSWNTILDGYVKAGEMNAAFELFEKMPARN 244


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 602

 Score =  171 bits (433), Expect(2) = 2e-62
 Identities = 85/170 (50%), Positives = 108/170 (63%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN +L GY KA  MS A +  + M  RDVVSWST++SGY + GD+EMA
Sbjct: 207 LFDEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMA 266

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LVSWTIMIS YAE+GL  +A  L+ QME+                    
Sbjct: 267 RMLFDKMPSKNLVSWTIMISGYAEKGLVNEAIQLFMQMEETGLRLDVAAFVSILAACAES 326

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GK++H ++ RS Y  +T + NALIDMY KCG L+KA   FN +E+
Sbjct: 327 GMLSLGKKVHDSVERSTYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLEK 376



 Score = 95.1 bits (235), Expect(2) = 2e-62
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 QRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIR 673
           +RD      MIHGLA    GKKAL+LF  M+ E   P+ VTL+G+L ACNH GL+++GI 
Sbjct: 376 KRDLVSWNAMIHGLAMHGRGKKALELFFRMKQEGFVPDKVTLVGILCACNHTGLVDEGIL 435

Query: 674 YFYTMESNYNITPQIEHYGCMI 739
           +FY+ME +Y + P++EHYGC+I
Sbjct: 436 FFYSMEKDYGVKPEVEHYGCLI 457



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+  A +    M+ RDVVSW+++IS   + GD+  A+ LFD++P++D
Sbjct: 156 NSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  M+  Y +      A  L+  M +++
Sbjct: 216 RVSWNTMLDGYTKAEQMSVAFELFKTMPQRD 246


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 602

 Score =  170 bits (431), Expect(2) = 4e-62
 Identities = 84/170 (49%), Positives = 108/170 (63%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN +L GY KA  MS A +  + M  RDVVSWST++SGY + GD+EMA
Sbjct: 207 LFDEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMA 266

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LVSWTIMIS YAE+GL  +A  L+ QME+                    
Sbjct: 267 RMLFDKMPSKNLVSWTIMISGYAEKGLINEAILLFMQMEETGLRLDVAAFVSILAACAES 326

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GK++H ++ RS Y  +T + NALIDMY KCG L+KA   FN +++
Sbjct: 327 GMLSLGKKVHDSVERSMYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLKK 376



 Score = 95.1 bits (235), Expect(2) = 4e-62
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 QRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIR 673
           +RD      MIHGLA    GKKAL+LF  M+ E   P+ VTL+G+L ACNH GL+++GI 
Sbjct: 376 KRDLVSWNAMIHGLAMHGRGKKALELFIRMKQEGFVPDKVTLVGILCACNHTGLVDEGIL 435

Query: 674 YFYTMESNYNITPQIEHYGCMI 739
           +FY+ME +Y + P++EHYGC+I
Sbjct: 436 FFYSMEKDYGVKPEVEHYGCLI 457



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+  A +    M+ RDVVSW+++IS   + GD+  A+ LFD++P++D
Sbjct: 156 NSLIDAYSKCGLVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  M+  Y +      A  L+  M +++
Sbjct: 216 RVSWNTMLDGYTKAEQMSVAFELFKTMPQRD 246


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  165 bits (417), Expect(2) = 9e-62
 Identities = 78/169 (46%), Positives = 110/169 (65%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           +FDEMP +D +SWN +L GYVK G M  A K  ++M  R+VVSWST++ GY + GD+EMA
Sbjct: 209 VFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMA 268

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LVSWTI++S +AE+GLA++A  L+DQMEK                    
Sbjct: 269 RMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAES 328

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEME 509
                G++IH +I  + +  +T I+NAL+DMY KCG LN A   FN+++
Sbjct: 329 GLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIK 377



 Score = 99.4 bits (246), Expect(2) = 9e-62
 Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +2

Query: 488 DMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLED 664
           D+  +D      M+ GLA   HG KAL+LF+ M+ E  +PN VT++GVL AC HAGL++D
Sbjct: 375 DIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDD 434

Query: 665 GIRYFYTMESNYNITPQIEHYGCMI 739
           GIRYF TME +Y + P++EHYGCM+
Sbjct: 435 GIRYFSTMERDYTLVPEVEHYGCMV 459



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALK-FIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEK 212
           N+++  Y K G  G+S A K F+     RDVVSW+++ISG A+ G  E A+ +FD++PEK
Sbjct: 157 NSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEK 216

Query: 213 DLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           D +SW  M+  Y + G   DA  L+D+M ++N
Sbjct: 217 DGISWNTMLDGYVKVGKMDDAFKLFDEMPERN 248


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  174 bits (441), Expect(2) = 2e-60
 Identities = 82/166 (49%), Positives = 112/166 (67%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD V+WN +L GYVKAG MS A +F ++M  R+VVSWST++SGY+R GD++MA
Sbjct: 207 LFDEMPERDLVTWNTMLDGYVKAGQMSEAFEFFQRMPERNVVSWSTIVSGYSRAGDMDMA 266

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LV+WTI++S YA +G+A +A+ LYDQME                     
Sbjct: 267 RILFDKMPVKNLVTWTIIVSGYAAKGIANEANSLYDQMEDAGLKFDDGTIISVLAACAES 326

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                G+++H ++ R RY   T ++NAL+DMY KCGSL+KA   FN
Sbjct: 327 GLLGLGEKVHASMDRIRYRCCTPVSNALVDMYAKCGSLDKAYKVFN 372



 Score = 85.9 bits (211), Expect(2) = 2e-60
 Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +2

Query: 500 RDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIRY 676
           +D      MIHGLA   HG+KAL LF  M+ E  +P+ VT +G+L  C HAG +++G+ Y
Sbjct: 377 KDLVSWNAMIHGLAIHGHGEKALWLFGRMKKESFSPDAVTFVGILCGCAHAGFVKEGLYY 436

Query: 677 FYTMESNYNITPQIEHYGCMI 739
           F++ME +Y + PQ+EHYGC++
Sbjct: 437 FHSMERDYGVVPQVEHYGCVV 457



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           NA++  Y K G  G+  A K    M  RDVVSW++++ G  + G++  A+ LFD++PE+D
Sbjct: 156 NALIDSYSKCGPVGVFAAKKLFLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEMPERD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           LV+W  M+  Y + G   +A   + +M ++N
Sbjct: 216 LVTWNTMLDGYVKAGQMSEAFEFFQRMPERN 246


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  174 bits (442), Expect(2) = 2e-60
 Identities = 87/168 (51%), Positives = 111/168 (66%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEM  RD VSWN IL GYVKAG MS A    EKM  R+VVSWST++SGY +TGD+EMA
Sbjct: 211 LFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMA 270

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFDK+P K+LV+WTI+IS +AE+GLAK+A  LY+QME                     
Sbjct: 271 RMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAES 330

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEM 506
                GK++H +I + R   S +++NAL+DMY KCG ++KA   FNEM
Sbjct: 331 GLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEM 378



 Score = 85.1 bits (209), Expect(2) = 2e-60
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +2

Query: 488 DMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLED 664
           +M  RD      M+ GLA   HG+KA+ LF  M+ E   P+ VTL+ +L AC HAG ++ 
Sbjct: 377 EMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQ 436

Query: 665 GIRYFYTMESNYNITPQIEHYGCMI 739
           G+ YF +ME ++ I P IEHYGCMI
Sbjct: 437 GLSYFNSMERDHGIVPHIEHYGCMI 461



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G++ A+K   +M  +D+VSW+++I G  + GD+  A+ LFD++ E+D
Sbjct: 160 NSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERD 219

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  Y + G    A  L+++M ++N
Sbjct: 220 AVSWNTILDGYVKAGEMSQAFNLFEKMPERN 250


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
           gi|550340897|gb|EEE85888.2| hypothetical protein
           POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  169 bits (429), Expect(2) = 5e-60
 Identities = 83/170 (48%), Positives = 110/170 (64%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP +D VSWN IL GYVKAG M+ A    E M  R+VVSWST++SGY + GD+EMA
Sbjct: 211 LFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMA 270

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + LFD++P K+LVSWTI++S YA +GLAKDA   ++QME+                    
Sbjct: 271 RMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAES 330

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GKR+H +I R RY  S +++NAL+DMY KCG +++A   FN M +
Sbjct: 331 GLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSK 380



 Score = 89.0 bits (219), Expect(2) = 5e-60
 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +2

Query: 491 MFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDG 667
           M ++D      M+ GLA   HG+KAL LF  MR E   P+ VTL+ VL AC HAG +++G
Sbjct: 378 MSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEG 437

Query: 668 IRYFYTMESNYNITPQIEHYGCMI 739
           IRYF  ME +Y I P IEHYGCM+
Sbjct: 438 IRYFNNMERDYGIVPHIEHYGCMV 461



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+ +A++  + M  RDVVSW+++I G  + G++  A  LFD++P KD
Sbjct: 160 NSLIDSYCKCGLLGVKSAMRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKD 219

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  Y + G    A  L++ M ++N
Sbjct: 220 AVSWNTILDGYVKAGEMNKAFGLFESMPERN 250


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
           gi|557533317|gb|ESR44500.1| hypothetical protein
           CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score =  169 bits (427), Expect(2) = 2e-59
 Identities = 82/170 (48%), Positives = 110/170 (64%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN IL GY KAG M+ A +  EK+  R++VSWST++ GY++ GD+EMA
Sbjct: 214 LFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMA 273

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           K LFD++P K LV WTI+IS YAE+G+AK+A  LYDQME+                    
Sbjct: 274 KLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACTES 333

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                G ++H +I + R+  +T++ NAL+DMY KCGSL+ A   FN M +
Sbjct: 334 GLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTK 383



 Score = 87.4 bits (215), Expect(2) = 2e-59
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 491 MFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDG 667
           M ++D      M++GLA    G+KAL LF  M+ E   P+  T +GVL AC HAG ++ G
Sbjct: 381 MTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKG 440

Query: 668 IRYFYTMESNYNITPQIEHYGCMI 739
           ++YFY+ME +Y I PQ+EHYGCMI
Sbjct: 441 VQYFYSMERDYGILPQVEHYGCMI 464



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+S A K    M  RD+VSW+++I+G  + G++  A+ LFD++PE+D
Sbjct: 163 NSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERD 222

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  YA+ G    A  L++++  +N
Sbjct: 223 AVSWNTILDGYAKAGEMNLAFELFEKIPHRN 253


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Citrus sinensis]
          Length = 614

 Score =  167 bits (422), Expect(2) = 9e-59
 Identities = 82/170 (48%), Positives = 109/170 (64%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN IL GY KAG M+ A +  EK+  R++VSWST+I GY++  D+EMA
Sbjct: 214 LFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMIWGYSKDADMEMA 273

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           K LFD++P K LV WTI+IS YAE+G+AK+A  LYDQME+                    
Sbjct: 274 KLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAES 333

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                G ++H +I + R+  +T++ NAL+DMY KCGSL+ A   FN M +
Sbjct: 334 GLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTK 383



 Score = 87.4 bits (215), Expect(2) = 9e-59
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 491 MFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDG 667
           M ++D      M++GLA    G+KAL LF  M+ E   P+  T +GVL AC HAG ++ G
Sbjct: 381 MTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKG 440

Query: 668 IRYFYTMESNYNITPQIEHYGCMI 739
           ++YFY+ME +Y I PQ+EHYGCMI
Sbjct: 441 VQYFYSMERDYGILPQVEHYGCMI 464



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+S A K    M  RD+VSW+++I+G  +  ++  A+ LFD++PE+D
Sbjct: 163 NSLIDSYSKCGAVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGEELSEARRLFDEMPERD 222

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  YA+ G    A  L++++  +N
Sbjct: 223 AVSWNTILDGYAKAGEMNLAFELFEKIPHRN 253


>ref|XP_007217279.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
           gi|462413429|gb|EMJ18478.1| hypothetical protein
           PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  168 bits (425), Expect(2) = 3e-58
 Identities = 80/166 (48%), Positives = 111/166 (66%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP +D VSWN IL GY KAG M+ A +  E+M  R+VVSWST++SGY++ GD+ MA
Sbjct: 205 LFDEMPDKDAVSWNTILDGYAKAGQMNEAFELFERMPQRNVVSWSTLVSGYSKAGDMGMA 264

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P ++LV WTI+IS YAE+GLAK+A  LYDQME+                    
Sbjct: 265 RMMFDKMPFRNLVPWTIIISGYAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAES 324

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                G+++H +I R+R+  ST ++NAL+DMY KCG L++A   F+
Sbjct: 325 GLIGLGRKVHASIERTRFKCSTPVSNALLDMYAKCGMLDEASRVFH 370



 Score = 84.3 bits (207), Expect(2) = 3e-58
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 QRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIR 673
           ++D      M+ GLA   HG KAL LF  M      P+ VT +GVL AC HAG +E+G++
Sbjct: 374 KKDLVSWNAMLQGLAMHGHGDKALQLFSRMVKAGFLPDKVTFIGVLCACTHAGFVEEGLQ 433

Query: 674 YFYTMESNYNITPQIEHYGCMI 739
            F+TME  Y I P+IEHYGCMI
Sbjct: 434 AFHTMEREYGIVPEIEHYGCMI 455



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+S A K    M  RD+VSW+++I G A+TG++  A+ LFD++P+KD
Sbjct: 154 NSLIDTYSKCGLLGVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEMPDKD 213

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  YA+ G   +A  L+++M ++N
Sbjct: 214 AVSWNTILDGYAKAGQMNEAFELFERMPQRN 244


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  169 bits (427), Expect(2) = 7e-58
 Identities = 82/170 (48%), Positives = 111/170 (65%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD VSWN+IL GY KAG M  A +  E+M  R+VVSWST++SGY++ GD+ MA
Sbjct: 207 LFDEMPERDAVSWNSILDGYAKAGKMDEAFELFERMPQRNVVSWSTLVSGYSKVGDMGMA 266

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FD++P K+LV WTI+IS YA++GLAK+A  LYDQME                     
Sbjct: 267 RMMFDRMPFKNLVPWTIIISGYAQKGLAKEAIMLYDQMEGDGLKLDNGAIISILAACAES 326

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                GK++H++I R+R+  ST + NAL+DMY KCG L +A   F+ + R
Sbjct: 327 GLIALGKKVHESIERNRFKCSTPVLNALLDMYAKCGGLEEAYRVFDGIAR 376



 Score = 82.4 bits (202), Expect(2) = 7e-58
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +2

Query: 497 QRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLEDGIR 673
           ++D     +M+ GLA   HG+KAL LF  M      P+ VT +GVL AC H+G +E+G+ 
Sbjct: 376 RKDLVSWNSMLQGLAMHGHGEKALQLFSRMEKAGFRPDKVTFIGVLCACTHSGFVEEGLD 435

Query: 674 YFYTMESNYNITPQIEHYGCMI 739
            F+ ME  Y I P++EHYGCMI
Sbjct: 436 VFHRMEKEYGIVPEVEHYGCMI 457



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAG--GMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           N+++  Y K G  G+  A K    M+ +D+VSW+++I G AR G++  A+ LFD++PE+D
Sbjct: 156 NSLIDTYSKCGLEGVGAARKLFRVMEEKDIVSWNSMIGGLARAGELSDARQLFDEMPERD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
            VSW  ++  YA+ G   +A  L+++M ++N
Sbjct: 216 AVSWNSILDGYAKAGKMDEAFELFERMPQRN 246


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  154 bits (388), Expect(2) = 9e-58
 Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD +SWN +L GY +   MS A +  EKM  R+ VSWST++ GY++ GD+EMA
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266

Query: 183 KALFDKI--PEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXX 356
           + +FDK+  P K++V+WTI+I+ YAE+GL K+A  L DQM                    
Sbjct: 267 RVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACA 326

Query: 357 XXXXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                  G R H  I +S  NS+ S+ NAL+DMY KCGSL KA   FN+M +
Sbjct: 327 ESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPK 378



 Score = 97.1 bits (240), Expect(2) = 9e-58
 Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +2

Query: 488 DMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLED 664
           DM ++D     TM+HGL    HGK+A++LF  MR E + P+ VT + VL +CNHAGL+++
Sbjct: 375 DMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDE 434

Query: 665 GIRYFYTMESNYNITPQIEHYGCMI 739
           GI YFY+ME  Y++ P++EHYGC++
Sbjct: 435 GIDYFYSMEKVYDLVPKVEHYGCLV 459



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAGGMST--ALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           NA++  Y + GG+    A+K  EKM  RD VSW++++ G  + G++  A+ LFD++P++D
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           L+SW  M+  YA       A  L+++M ++N
Sbjct: 216 LISWNTMLDGYARCREMSRAFELFEKMPERN 246


>ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Oryza brachyantha]
          Length = 491

 Score =  160 bits (406), Expect(2) = 5e-57
 Identities = 74/166 (44%), Positives = 107/166 (64%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           +FDEMP RD VSWN +L GY KAG +  A +  ++M  R+VVSWST++SGY + GD+EMA
Sbjct: 93  MFDEMPERDTVSWNTMLDGYTKAGEVDAAFELFQRMPERNVVSWSTIVSGYCKKGDLEMA 152

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P K+LV+WTIM+S+ AE+GL  +A  L+ QM++ +                  
Sbjct: 153 RVIFDKMPSKNLVTWTIMVSACAEKGLVDEAGKLFAQMKEADVELDVASVVSILAACAES 212

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                GKRIH+ + + +   ST + NALIDM+CKCG +N+A   F+
Sbjct: 213 GSLSLGKRIHRYVRKRKLGRSTHVCNALIDMFCKCGCVNRADYVFD 258



 Score = 87.8 bits (216), Expect(2) = 5e-57
 Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T+  ++D     ++I G A   HG+KAL+LF  M+ +   P+ VT++ VLSAC H G ++
Sbjct: 259 TETVEKDSVSWNSIIGGFAMHGHGEKALELFAQMKQQGFNPDAVTMINVLSACRHMGSVD 318

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G RYF  ME +Y I PQIEHYGCMI
Sbjct: 319 EGRRYFSNMERDYGIMPQIEHYGCMI 344



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = +3

Query: 27  DNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIP 206
           D    NA++  Y K GG   A K  ++M +RDVVSW+T ++   R G++  A+ +FD++P
Sbjct: 39  DTFVGNALIDAYSKNGGFLDARKVFDEMPARDVVSWNTAMAAMVREGELSGARKMFDEMP 98

Query: 207 EKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           E+D VSW  M+  Y + G    A  L+ +M ++N
Sbjct: 99  ERDTVSWNTMLDGYTKAGEVDAAFELFQRMPERN 132


>ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 600

 Score =  153 bits (387), Expect(2) = 2e-56
 Identities = 73/166 (43%), Positives = 104/166 (62%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           +FDEM  +D VSWN +L GY KAG +  A K  + M  R+VVSWSTV+SGY + GD+EMA
Sbjct: 207 MFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMA 266

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P K+LV+WTIM+S+ A+ GL ++A  L+ QM++ +                  
Sbjct: 267 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAES 326

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                GKRIH+ +   +   ST + NALIDM+CKCG +N+A   F+
Sbjct: 327 GSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFD 372



 Score = 93.2 bits (230), Expect(2) = 2e-56
 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T++ ++D     T+I G A   HG KALD F  M+L+   P+ VT++ VLSAC H G +E
Sbjct: 373 TEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVE 432

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G RYF  ME +Y + PQIEHYGCMI
Sbjct: 433 EGRRYFANMERDYGVVPQIEHYGCMI 458


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332644032|gb|AEE77553.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  149 bits (376), Expect(2) = 2e-56
 Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 2/172 (1%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP RD +SWN +L GY +   MS A +  EKM  R+ VSWST++ GY++ GD+EMA
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266

Query: 183 KALFDK--IPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXX 356
           + +FDK  +P K++V+WTI+I+ YAE+GL K+A  L DQM                    
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326

Query: 357 XXXXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFNEMER 512
                  G RIH  + RS   S+  + NAL+DMY KCG+L KA   FN++ +
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378



 Score = 97.4 bits (241), Expect(2) = 2e-56
 Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +2

Query: 488 DMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLED 664
           D+ ++D     TM+HGL    HGK+A++LF  MR E + P+ VT + VL +CNHAGL+++
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434

Query: 665 GIRYFYTMESNYNITPQIEHYGCMI 739
           GI YFY+ME  Y++ PQ+EHYGC++
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLV 459



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = +3

Query: 42  NAILHGYVKAGGMST--ALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIPEKD 215
           NA++  Y + GG+    A+K  EKM  RD VSW++++ G  + G++  A+ LFD++P++D
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215

Query: 216 LVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           L+SW  M+  YA       A  L+++M ++N
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERN 246


>gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
          Length = 921

 Score =  159 bits (401), Expect(2) = 3e-56
 Identities = 74/166 (44%), Positives = 106/166 (63%)
 Frame = +3

Query: 3    LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
            LFDEMP +D VSWN IL GY KAG +  A +  ++M  R+VVSWST++SGY + GD+EMA
Sbjct: 523  LFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 582

Query: 183  KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
            + +FDK+P K+LV+WTIM+S+ A++GL  +A  L+ QM++ +                  
Sbjct: 583  RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 642

Query: 363  XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                 GKRIH+ + +     ST + NALIDM+CKCG +N+A   F+
Sbjct: 643  GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFD 688



 Score = 87.0 bits (214), Expect(2) = 3e-56
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T+  Q+D     ++I G A   HG KAL+LF  M+ +   P+ VT++ VLSAC H G ++
Sbjct: 689 TETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVD 748

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G R+F  ME +Y I PQIEHYGCMI
Sbjct: 749 EGRRHFSNMERDYGIMPQIEHYGCMI 774



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +3

Query: 27  DNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIP 206
           D    NA++  Y K GG S A K  ++M  RDVVSW+T ++   R G++   + LFD++P
Sbjct: 469 DTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP 528

Query: 207 EKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           EKD VSW  ++  Y + G  + A  L+ +M ++N
Sbjct: 529 EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERN 562


>ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
           gi|255670427|dbj|BAH95753.1| Os12g0577900, partial
           [Oryza sativa Japonica Group]
          Length = 614

 Score =  159 bits (401), Expect(2) = 3e-56
 Identities = 74/166 (44%), Positives = 106/166 (63%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP +D VSWN IL GY KAG +  A +  ++M  R+VVSWST++SGY + GD+EMA
Sbjct: 216 LFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 275

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P K+LV+WTIM+S+ A++GL  +A  L+ QM++ +                  
Sbjct: 276 RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 335

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                GKRIH+ + +     ST + NALIDM+CKCG +N+A   F+
Sbjct: 336 GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFD 381



 Score = 87.0 bits (214), Expect(2) = 3e-56
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T+  Q+D     ++I G A   HG KAL+LF  M+ +   P+ VT++ VLSAC H G ++
Sbjct: 382 TETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVD 441

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G R+F  ME +Y I PQIEHYGCMI
Sbjct: 442 EGRRHFSNMERDYGIMPQIEHYGCMI 467



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +3

Query: 27  DNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIP 206
           D    NA++  Y K GG S A K  ++M  RDVVSW+T ++   R G++   + LFD++P
Sbjct: 162 DTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP 221

Query: 207 EKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           EKD VSW  ++  Y + G  + A  L+ +M ++N
Sbjct: 222 EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERN 255


>gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 491

 Score =  159 bits (401), Expect(2) = 3e-56
 Identities = 74/166 (44%), Positives = 106/166 (63%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           LFDEMP +D VSWN IL GY KAG +  A +  ++M  R+VVSWST++SGY + GD+EMA
Sbjct: 93  LFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 152

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P K+LV+WTIM+S+ A++GL  +A  L+ QM++ +                  
Sbjct: 153 RVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAES 212

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                GKRIH+ + +     ST + NALIDM+CKCG +N+A   F+
Sbjct: 213 GSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFD 258



 Score = 87.0 bits (214), Expect(2) = 3e-56
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T+  Q+D     ++I G A   HG KAL+LF  M+ +   P+ VT++ VLSAC H G ++
Sbjct: 259 TETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVD 318

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G R+F  ME +Y I PQIEHYGCMI
Sbjct: 319 EGRRHFSNMERDYGIMPQIEHYGCMI 344



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +3

Query: 27  DNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIP 206
           D    NA++  Y K GG S A K  ++M  RDVVSW+T ++   R G++   + LFD++P
Sbjct: 39  DTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP 98

Query: 207 EKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           EKD VSW  ++  Y + G  + A  L+ +M ++N
Sbjct: 99  EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERN 132


>dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 639

 Score =  155 bits (393), Expect(2) = 4e-56
 Identities = 74/166 (44%), Positives = 104/166 (62%)
 Frame = +3

Query: 3   LFDEMPHRDNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMA 182
           +FDEMP +D VSWN +L GY KAG M  A +  + M  R+VVSWSTV+SGY + GDIEMA
Sbjct: 241 MFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMA 300

Query: 183 KALFDKIPEKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQNXXXXXXXXXXXXXXXXXX 362
           + +FDK+P K+LV+WTIM+S+ A+ GL ++A  L+ QM++                    
Sbjct: 301 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAES 360

Query: 363 XXXXXGKRIHKTIIRSRYNSSTSINNALIDMYCKCGSLNKAQICFN 500
                GKRIH+ +   +   ST + NA+IDM+CKCG +N+A   F+
Sbjct: 361 GSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFD 406



 Score = 89.7 bits (221), Expect(2) = 4e-56
 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = +2

Query: 485 TDMFQRDGTXXXTMIHGLAKR-HGKKALDLFESMRLERVTPNPVTLLGVLSACNHAGLLE 661
           T++ ++D     T+I G A   HG KALD F  M+L+   P+ VT++ VLSAC H G +E
Sbjct: 407 TEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVE 466

Query: 662 DGIRYFYTMESNYNITPQIEHYGCMI 739
           +G ++F  ME +Y I PQIEHYGCMI
Sbjct: 467 EGRQHFSNMERDYGIVPQIEHYGCMI 492



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 34/94 (36%), Positives = 55/94 (58%)
 Frame = +3

Query: 27  DNVSWNAILHGYVKAGGMSTALKFIEKMQSRDVVSWSTVISGYARTGDIEMAKALFDKIP 206
           D    NA++  Y K GG   A K  E+M  RD VSW++ ++   R G++  A+ +FD++P
Sbjct: 187 DTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMP 246

Query: 207 EKDLVSWTIMISSYAERGLAKDAHFLYDQMEKQN 308
           +KD VSW  ++  Y + G  +DA  L+  M ++N
Sbjct: 247 DKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERN 280