BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00002621
         (5679 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   818   0.0  
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]   779   0.0  
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]   460   e-126
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]   417   e-113
emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]   394   e-106
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   296   8e-77
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   294   4e-76
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         294   4e-76
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   292   1e-75
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   290   4e-75
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   282   1e-72
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   278   3e-71
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           277   5e-71
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   270   8e-69
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   270   8e-69
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   264   4e-67
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   261   4e-66
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               259   1e-65
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              257   5e-65
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   256   7e-65

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  818 bits (2114), Expect = 0.0
 Identities = 433/846 (51%), Positives = 555/846 (65%), Gaps = 47/846 (5%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPP---EEVGALKKWKI 2229
            M +LQV+GG++KLNNQNY TW TC+ SY+QG DLW+VV G E+T P   +  G L+KWKI
Sbjct: 1    MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKVEDANGILRKWKI 60

Query: 2228 KAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGE 2049
            KAGKA+FA+KTTIE+++LEH+RDA TP EAW+T + LFSKKN+ +LQLLE+EL S  Q +
Sbjct: 61   KAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRD 120

Query: 2048 MSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIV 1869
            ++I +YF KV+TLCREISELD  + I E+ ++RIIIHGLR E+R F+AAIQGW  Q S+V
Sbjct: 121  LTIAQYFHKVKTLCREISELDLEAPIGETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180

Query: 1868 ELENLLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEG 1689
            E ENLLA QE L KQ+            L++++G  +   H             +CSQ  
Sbjct: 181  EFENLLAGQEALAKQMGGVSLKGEEEA-LYAHKGGWNSXQH-TVRRTKKNEDKAKCSQGE 238

Query: 1688 RARRGDRSSKSHQS-RRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWD 1512
            R+ R +  SK+  + ++F+G CYNC KKGH+A+ C SKK + ESN  T      S++EWD
Sbjct: 239  RSARVEGDSKNPGTXKKFEGKCYNCXKKGHMAKDCWSKKGLVESNATT----SKSEDEWD 294

Query: 1511 FEEPLAQ-EENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVT 1335
             +   A   E+ F  T ++   IDYE DWIIDSGCSNHMTGDK K Q++ EYKGR +VVT
Sbjct: 295  AQAFFAAIGESAFIATTSEQ--IDYEKDWIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVT 352

Query: 1334 ADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDV 1155
            A+N KLPI H+G T +  + ++ +V LQ+VY V GMKKNLLSVAQLT+SG+ V+FGP DV
Sbjct: 353  ANNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHSVLFGPQDV 412

Query: 1154 KIYRDVKISGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMM 975
            K+Y D+++   PV++GRRLESVYVM AETA+ ++TRKNETADLWH RL H+SY KL +MM
Sbjct: 413  KVYHDLEVMEEPVIKGRRLESVYVMSAETAYVDKTRKNETADLWHMRLSHISYSKLTMMM 472

Query: 974  AKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDESKFRAKAPLELVHSDVFGPVKQRSIS 795
             KSMLKGLPQL+VR  T+CA CQYGKAHQLPY+ESK++AK PLEL+HSDVFGPVKQ S+S
Sbjct: 473  KKSMLKGLPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVKQASLS 532

Query: 794  GLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLV 615
            G++YM+TFIDDFS+ +++                          ++    +    EY + 
Sbjct: 533  GMKYMVTFIDDFSRRVYL--------------------------QMSFFTSSENXEYAI- 565

Query: 614  KFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR---------- 465
                          +TC   PQQNGV ERKNRHLAEICRSMLHAKNVPG           
Sbjct: 566  -------------SFTCANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEXMKTAA 612

Query: 464  --------------------------------FGCVCYVFVPSHLRSKFEKKAVRCIFVG 381
                                            FGCVCYVFVP+HLRSK +KKAVRC+ VG
Sbjct: 613  FVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVLVG 672

Query: 380  YDNQRKGWKCCDPTTGKCYTSRNVVLDEASSWWSPQKEELPESKEMEDSLQKTGEQIAEI 201
            YD+QRK W+CCDPTTGKCYTSRNVV DE+SSWWS +KE L +S   +D LQ      A I
Sbjct: 673  YDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSBVFKDELQS-----ARI 727

Query: 200  RMVPEESTELRDEEVTEDEPVRSPWQTGVHRRSTYSNXXXXXXXXXXXXXXXXPNLRYAN 21
            ++   E+    D ++  D+  +SPWQTGVH + +                   PN +YAN
Sbjct: 728  QLSLGEAENAXDGDI-GDDXTQSPWQTGVHGQPSEER-------------TKKPNPKYAN 773

Query: 20   FAIIKE 3
             AI+++
Sbjct: 774  VAIVED 779


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score =  779 bits (2012), Expect = 0.0
 Identities = 411/812 (50%), Positives = 535/812 (65%), Gaps = 13/812 (1%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEV---GALKKWKI 2229
            M +LQV+GG++KLNNQNY TW TC+ SY+QG DLW+VV G E+T PE     G L+KWKI
Sbjct: 1    MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPEAEDVNGILRKWKI 60

Query: 2228 KAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGE 2049
            K GKA+FA+KTTIE+++LEH+RDA TP EAW+T + LFSKKN+ +LQLLE+ELLS  Q +
Sbjct: 61   KXGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIAQRD 120

Query: 2048 MSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIV 1869
            ++I  YF KV+TLCREISELD  + I E++++RIIIHGLR ++R F+AAIQGW  Q S+V
Sbjct: 121  LTITHYFHKVKTLCREISELDLEAPIGETRMKRIIIHGLRPKFRGFVAAIQGWQNQPSLV 180

Query: 1868 ELENLLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEG 1689
            E ENLLA QE L KQ+            L++++GR +   H                 E 
Sbjct: 181  EFENLLAGQEALAKQMGGVSLKGEEEA-LYAHKGRWNSKQHTVGRTKKNEDKAKXSQGER 239

Query: 1688 RARRGDRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDF 1509
             AR    S      ++ +G CYNCGKKGH+A+ C SKK + ESN AT      S++EWD 
Sbjct: 240  SARVEGDSKNPXTRKKXEGKCYNCGKKGHMAKDCWSKKGLVESNAATSE----SEBEWDA 295

Query: 1508 EEP-LAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTA 1332
            +   +A  E+ F  T ++   IDYE DWIIDSGCSNHMTGDK K  ++ EYKGR +VVT 
Sbjct: 296  QAFFVAXGESXFIATTSEQ--IDYEKDWIIDSGCSNHMTGDKEKLXDLSEYKGRHMVVTX 353

Query: 1331 DNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVK 1152
            +N K+PI H+G T +  + ++ +V LQ+VY V GMKKNLLSVAQLT+SG+ V+FGP DVK
Sbjct: 354  NNSKJPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHFVLFGPQDVK 413

Query: 1151 IYRDVKISGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMMA 972
            +YRD++I   PV+   RLESVYVM AETA  ++TRKNET DL H RL HVSY KL VMM 
Sbjct: 414  VYRDLEIMEEPVIXRWRLESVYVMSAETAXVDKTRKNETTDLXHMRLSHVSYSKLTVMMK 473

Query: 971  KSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDESKFRAKAPLELVHSDVFGPVKQRSISG 792
            KSMLKGLPQL+VR +T+CAGC YGKAHQLPY+ESK++ K PLEL+HSDVFGPVK  S+SG
Sbjct: 474  KSMLKGLPQLEVRKDTICAGCXYGKAHQLPYEESKWKTKGPLELIHSDVFGPVKXASLSG 533

Query: 791  LRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLVK 612
            ++YM TFIDDFS+Y+W+ FM                   E+ K+I+CLR DNGGE     
Sbjct: 534  MKYMXTFIDDFSRYVWVHFMKEKSETFSKFKEFKEMTEAEVDKRIRCLRXDNGGE----- 588

Query: 611  FSQFLRENHIRHQYTCPYMPQQNGVVER---KNRHLAEICRSMLHAKNVPGR---FGCVC 450
                L   ++  ++    M     V+ R   +  + +     + + K +      FGCVC
Sbjct: 589  --SMLHXKNVPGRFWVEAMKTAAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFRVFGCVC 646

Query: 449  YVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSWWSPQK 270
            Y FVP+H RSK +KK VRC+ VGYD+Q K W+CC+PTTGK YTSRNVV DE+SSWWS +K
Sbjct: 647  YAFVPNHXRSKMDKKXVRCVLVGYDSQXKRWRCCNPTTGKYYTSRNVVFDESSSWWSSEK 706

Query: 269  EELPESKEMEDSLQKTGEQIAEIRMVPEESTELRDEEVTEDEPVRSPWQTGVHRRSTYS- 93
            E LP+S   +D LQ      A I++   E+    D ++ +DE  +SPWQTGVH + +   
Sbjct: 707  EILPDSDVFKDELQS-----ARIQLSLGEAENAADGDIGDDE-TQSPWQTGVHGQPSEEG 760

Query: 92   --NXXXXXXXXXXXXXXXXPNLRYANFAIIKE 3
              +                PN +YAN AI+++
Sbjct: 761  EPSEIEAPIPLRRSARTKKPNPKYANVAIVED 792


>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
          Length = 1161

 Score =  460 bits (1183), Expect = e-126
 Identities = 242/455 (53%), Positives = 309/455 (67%), Gaps = 3/455 (0%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEV---GALKKWKI 2229
            M +L+V+GG++KLNNQNY TW TC+ SY+ G DLW+VV G E+T  E     G L+KWKI
Sbjct: 1    MGDLKVIGGIKKLNNQNYNTWSTCMMSYMXGQDLWEVVNGSEITXXEXEDANGILRKWKI 60

Query: 2228 KAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGE 2049
            KAGK +FA+KTTIE+++LEH+RDA TP EAW+T + LFSKKN+ +LQLLE+ELLS  Q +
Sbjct: 61   KAGKXMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIXQRD 120

Query: 2048 MSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIV 1869
             +I  YF KV+TLCREISELD  + I E++++RIIIHGLR E+R F+AAIQGW  Q S+V
Sbjct: 121  XTIAXYFHKVKTLCREISELDLEAPIGETRMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180

Query: 1868 ELENLLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEG 1689
            E ENLLA QE L KQ+           AL++++ R +   H                 E 
Sbjct: 181  EFENLLAGQEALAKQM-GGVSLKGEEEALYAHKXRWNSKQHTVRRTKKNEDKAKSSQGER 239

Query: 1688 RARRGDRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDF 1509
             AR    S      ++F+GTCYNC KKGH+A+ C SKK + ESN AT      S +EWD 
Sbjct: 240  SARVEGDSKNPXTRKKFEGTCYNCRKKGHMAKDCWSKKGLVESNAAT----SKSXDEWD- 294

Query: 1508 EEPLAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTAD 1329
             + L     E A      + IDYE DWIIDSGCSNHMTGDK K  ++ EYKGR +VVT +
Sbjct: 295  AQALFXAIGESAFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLXDLXEYKGRHMVVTXN 354

Query: 1328 NIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKI 1149
            N KLPI H+G T +  + ++ +V LQ+VY V GMKKNLLS+AQLT+SG  V+FGP DVK+
Sbjct: 355  NSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVXGMKKNLLSIAQLTSSGXSVLFGPQDVKV 414

Query: 1148 YRDVKISGAPVMEGRRLESVYVMLAETAFAERTRK 1044
            YRD++I    V++GRRLESVYVM AETA+   T K
Sbjct: 415  YRDLEIMEELVIKGRRLESVYVMSAETAYDVSTAK 449



 Score =  170 bits (430), Expect = 8e-39
 Identities = 111/315 (35%), Positives = 143/315 (45%), Gaps = 45/315 (14%)
 Frame = -2

Query: 812  KQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNG 633
            KQ S+SG++YM+TFI+DFS Y+W+ FM                   ++ K+I+CLRTDNG
Sbjct: 461  KQASLSGMKYMVTFINDFSNYVWVYFMKEKSETFSKYKEFKEMTEVKVDKRIRCLRTDNG 520

Query: 632  GEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR---- 465
            GEYT  +F  FLRE  +RHQ+TC   PQQN V ERKNRHLAEICRSMLHAKNVP R    
Sbjct: 521  GEYTSDEFFYFLRECRVRHQFTCANTPQQNSVAERKNRHLAEICRSMLHAKNVPRRFWAE 580

Query: 464  --------------------------------------FGCVCYVFVPSHLRSKFEKKAV 399
                                                  FGCVCYVFVP+HLRSK +K   
Sbjct: 581  AMKTVAFVINRLPQQKLNFSSPFEKLWNIKPTISYFRVFGCVCYVFVPNHLRSKMDK--- 637

Query: 398  RCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSWWSPQKEELPESKEMEDSLQKTG 219
                                                      KE LP+S   +D LQ   
Sbjct: 638  ------------------------------------------KEILPDSDVFKDELQS-- 653

Query: 218  EQIAEIRMVPEESTELRDEEVTEDEPVRSPWQTGVHRRSTYS---NXXXXXXXXXXXXXX 48
               A I++   E     + ++ +DE  +SPWQTGVH + +     +              
Sbjct: 654  ---ARIQLSLGEXENAANGDIXDDE-TQSPWQTGVHGQXSEEGEPSETEAPIPLRRSART 709

Query: 47   XXPNLRYANFAIIKE 3
              PN +YAN AI+++
Sbjct: 710  KKPNPKYANVAIVED 724


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score =  417 bits (1073), Expect = e-113
 Identities = 224/436 (51%), Positives = 284/436 (65%)
 Frame = -2

Query: 2213 LFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGEMSIRE 2034
            +FA+KTTIE+++LEH+RDA TP EAW+T + LFSKKN+ +LQLLE+ELL   Q  ++I +
Sbjct: 1    MFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLLVAQCNLTIAQ 60

Query: 2033 YFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIVELENL 1854
            YF KV+TLCREI ELD  + I E++++RIIIHGLR E R F+AA+QGW  Q S+VE ENL
Sbjct: 61   YFHKVKTLCREIFELDLEAPIGETRMKRIIIHGLRPELRGFVAAVQGWKNQPSLVEFENL 120

Query: 1853 LADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEGRARRG 1674
            LA QE L KQ+           AL++++GR +   H                 E  AR  
Sbjct: 121  LAGQEALAKQM-GGVSLKGEEKALYAHKGRWNSKQHTVGRTKKNEDKAKSSQGERSARVK 179

Query: 1673 DRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPLA 1494
              S      ++F G CYNC KKG +A+ C SKK + E+N  T      S +EWD +   A
Sbjct: 180  GDSKNLGTRKKFQGRCYNCRKKGXMAKDCWSKKGLVENNATT----SKSKDEWDTQAFFA 235

Query: 1493 QEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKLP 1314
                E A      + IDYE DWIIDSGCSNHMTGDK K Q+  EYKGR +VVT +N KLP
Sbjct: 236  -AXGESAFIATTSEQIDYEKDWIIDSGCSNHMTGDKEKLQDFSEYKGRHMVVTXNNSKLP 294

Query: 1313 ITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKIYRDVK 1134
            I H+                       GMKKNLLSVAQLT+SG+ V+FGP DVK+YRD++
Sbjct: 295  IAHI-----------------------GMKKNLLSVAQLTSSGHFVLFGPQDVKVYRDLE 331

Query: 1133 ISGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMMAKSMLKG 954
            I    V++GRRLESVYVM AETA+  +TRKNET +LWH RL H+SY KL VMM KSMLKG
Sbjct: 332  IMEESVIKGRRLESVYVMSAETAYVNKTRKNETINLWHMRLSHISYSKLTVMMKKSMLKG 391

Query: 953  LPQLDVRTETVCAGCQ 906
            LP+L++R +T+CAGC+
Sbjct: 392  LPELEMRKDTICAGCE 407


>emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]
          Length = 1052

 Score =  394 bits (1011), Expect = e-106
 Identities = 203/374 (54%), Positives = 246/374 (65%), Gaps = 42/374 (11%)
 Frame = -2

Query: 1394 GDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNL 1215
            GDK K Q++ EYKGR +V+T +N KLPI H+G T +  + ++ +V LQ+VY V GMKKNL
Sbjct: 237  GDKEKLQDLSEYKGRHMVITTNNSKLPIAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNL 296

Query: 1214 LSVAQLTASGYHVVFGPSDVKIYRDVKISGAPVMEGRRLESVYVMLAETAFAERTRKNET 1035
            LSVAQLT+SG+ V+F P DVK+ RD++I   PV++G RLES+YVM  ETA+ ++TRKNE 
Sbjct: 297  LSVAQLTSSGHFVLFSPQDVKVXRDLEIMEEPVIKGWRLESIYVMFVETAYVDKTRKNEI 356

Query: 1034 ADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDESKFRAK 855
            ADLWH RL HVSY KL VMM KSMLKGLPQL+            GKAHQL Y+ESK++AK
Sbjct: 357  ADLWHMRLSHVSYSKLTVMMKKSMLKGLPQLE------------GKAHQLSYEESKWKAK 404

Query: 854  APLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXX 675
             PLEL+HSDVFGPVKQ  +SG++YM+TFIDDFS+Y+W+ FM                   
Sbjct: 405  GPLELIHSDVFGPVKQAXLSGMKYMVTFIDDFSRYVWVYFMKEKSETFSKFKEFKEMTEI 464

Query: 674  EIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRS 495
            E+ K+I CLRTDNG  YT  +F  FLRE  +RHQ+TC    QQNGV ERKNRHLAEICRS
Sbjct: 465  EVDKRIHCLRTDNGXXYTSNEFFYFLRECRVRHQFTCANTLQQNGVAERKNRHLAEICRS 524

Query: 494  MLHAKNVPGR------------------------------------------FGCVCYVF 441
            MLHAKNVPGR                                          FGCVCYVF
Sbjct: 525  MLHAKNVPGRFWAEAMKTXAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVF 584

Query: 440  VPSHLRSKFEKKAV 399
            VP HLR+K +KKAV
Sbjct: 585  VPKHLRNKMDKKAV 598



 Score =  256 bits (653), Expect = 1e-64
 Identities = 126/221 (57%), Positives = 167/221 (75%), Gaps = 3/221 (1%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEV---GALKKWKI 2229
            M +LQV+GG++KLNNQNY TW TC+ SY+QG DLW+VV G E+T PE     G L+KWKI
Sbjct: 1    MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPEAEDANGILRKWKI 60

Query: 2228 KAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGE 2049
            K GKA+FA+KTTIE+++LEH+RDA TP EAW+T + LFSKKN+ +LQLLE++LLS  Q +
Sbjct: 61   KVGKAMFALKTTIEEDVLEHIRDATTPYEAWNTFTKLFSKKNDTRLQLLESKLLSVTQRD 120

Query: 2048 MSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIV 1869
            ++I +YF KV+ LCREISELD  + I E++++RIIIHGLR E+R F+AA+QGW  Q S+V
Sbjct: 121  LTIAQYFHKVKMLCREISELDLEAPIGETRMKRIIIHGLRPEFRGFVAAVQGWQNQPSLV 180

Query: 1868 ELENLLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
            E ENLLA QE L KQ+           AL++++GR +   H
Sbjct: 181  EFENLLAGQEALAKQM-GGVSLKGEEEALYAHKGRWNSKQH 220


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  296 bits (758), Expect = 8e-77
 Identities = 230/836 (27%), Positives = 375/836 (44%), Gaps = 81/836 (9%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEE-------VGALK 2241
            MA+  V   +  L   NY  W   +++ L  +D+W++V    + P  E          L+
Sbjct: 1    MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 2240 KWKIKAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--EN 2076
              + +  KAL  I   ++++  E V +A + KEAW+ L + +   ++ K   LQ L  E 
Sbjct: 61   DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 2075 ELLSFRQGEMSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQ 1896
            E L  ++GE+ + +YF++V T+   +    +  K+ + +I   ++  L  ++   +  I+
Sbjct: 121  EALQMKEGEL-VSDYFSRVLTVTNNLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177

Query: 1895 GWPTQLSIVELENLLAD----------QEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
                 L  + +E LL            +E +V+Q+             +  RG       
Sbjct: 178  E-TKDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGR 236

Query: 1745 WXXXXXXXXXXXXRCSQEGRARRGDRSS----KSHQSRRFDGT---CYNCGKKGHIARYC 1587
                            ++   +RG+ SS    K H   R+D +   CYNCGK GH A  C
Sbjct: 237  GRGGYGNGRGWRP--HEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294

Query: 1586 RSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCS 1407
            ++               +  +E+ ++ E   QEE+   +           + W +DSG S
Sbjct: 295  KAPSN------------KKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGAS 342

Query: 1406 NHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGM 1227
            NHM G K+ F  + E   R  V   D  K+ +   G   I  ++   +  + +VY +  M
Sbjct: 343  NHMCGRKSMFAELDE-SVRGNVALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSM 400

Query: 1226 KKNLLSVAQLTASGYHVVFGPSDVKIYRDVK---ISGAPVMEGRRLESVYVMLAETAFAE 1056
            K N+LS+ QL   GY +    +++ I RD +   I+  P+ + R    ++V+      A+
Sbjct: 401  KTNILSLGQLLEKGYDIRLKDNNLSI-RDQESNLITKVPMSKNR----MFVLNIRNDIAQ 455

Query: 1055 RTRK--NETADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLP 882
              +    E + LWH R GH+++  L+++  K M++GLP ++     VC GC  GK  ++ 
Sbjct: 456  CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMS 514

Query: 881  Y-DESKFRAKAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXX 705
            +  ES  RA+ PLEL+H+DV GP+K +S+    Y + FIDDFS+  W+ F+         
Sbjct: 515  FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574

Query: 704  XXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERK 525
                      E G  I+ +R+D GGE+T  +F ++  +N IR Q T P  PQQNGVVERK
Sbjct: 575  FKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERK 634

Query: 524  NRHLAEICRSMLHAKNVP---------------------------------GR------- 465
            NR + E+ RSML +K +P                                 GR       
Sbjct: 635  NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694

Query: 464  --FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
              FG + +  VP   RSK + K+ + IF+GYDN  KG+K  +P T K   SRN+V DE  
Sbjct: 695  RVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEG 754

Query: 290  SW-WSPQKEE---LPESKEMEDSLQKTGEQIAEIRMVPEESTELRDEEVTEDEPVR 135
             W W+  +E+    P  +E E    +      E    P   T  + EE + +   R
Sbjct: 755  EWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPR 810


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  294 bits (752), Expect = 4e-76
 Identities = 220/790 (27%), Positives = 361/790 (45%), Gaps = 78/790 (9%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEE-------VGALK 2241
            MA+  V   +  L   NY  W   +++ L  +D+W++V    + P  E          L+
Sbjct: 1    MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 2240 KWKIKAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--EN 2076
              + +  KAL  I   ++++  E V +A + KEAW+ L + +   ++ K   LQ L  E 
Sbjct: 61   DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 2075 ELLSFRQGEMSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQ 1896
            E L  ++GE+ + +YF++V T+   +    +  K+ + +I   ++  L  ++   +  I+
Sbjct: 121  EALQMKEGEL-VSDYFSRVLTVTNNLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177

Query: 1895 GWPTQLSIVELENLLAD----------QEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
                 L  + +E LL            +E +V+Q+             +  RG       
Sbjct: 178  E-TKDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGR 236

Query: 1745 WXXXXXXXXXXXXRCSQEGRARRGDRSS----KSHQSRRFDGT---CYNCGKKGHIARYC 1587
                            ++   +RG+ SS    K H   R+D +   CYNCGK GH A  C
Sbjct: 237  GRGGYGNGRGWRP--HEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294

Query: 1586 RSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCS 1407
            ++               +  +E+ ++ E   QEE+   +        +  + W +DSG S
Sbjct: 295  KAPSN------------KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGAS 342

Query: 1406 NHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGM 1227
            NHM G K+ F  + E   R  V   D  K+ +   G   I  ++   +  + +VY +  M
Sbjct: 343  NHMCGRKSMFAELDE-SVRGNVALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSM 400

Query: 1226 KKNLLSVAQLTASGYHVVFGPSDVKIYRDVK---ISGAPVMEGRRLESVYVMLAETAFAE 1056
            K N+LS+ QL   GY +    +++ I RD +   I+  P+ + R    ++V+      A+
Sbjct: 401  KTNILSLGQLLEKGYDIRLKDNNLSI-RDQESNLITKVPMSKNR----MFVLNIRNDIAQ 455

Query: 1055 RTRK--NETADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLP 882
              +    E + LWH R GH+++  L+++  K M++GLP ++     VC GC  GK  ++ 
Sbjct: 456  CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMS 514

Query: 881  Y-DESKFRAKAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXX 705
            +  ES  RA+ PLEL+H+DV GP+K +S+    Y + FIDDFS+  W+ F+         
Sbjct: 515  FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574

Query: 704  XXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERK 525
                      E G  I+ +R+D GGE+T  +F ++  +N IR Q T P  PQQNGV ERK
Sbjct: 575  FKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERK 634

Query: 524  NRHLAEICRSMLHAKNVP---------------------------------GR------- 465
            NR + E+ RSML +K +P                                 GR       
Sbjct: 635  NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694

Query: 464  --FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
              FG + +  VP   RSK + K+ + IF+GYDN  KG+K  +P T K   SRN+V DE  
Sbjct: 695  RVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEG 754

Query: 290  SW-WSPQKEE 264
             W W+  +E+
Sbjct: 755  EWDWNSNEED 764


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  294 bits (752), Expect = 4e-76
 Identities = 229/836 (27%), Positives = 373/836 (44%), Gaps = 81/836 (9%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVG-------ALK 2241
            MA+  V   +  L   NY  W   +++ L  +D+W++V    + P  E          L+
Sbjct: 1    MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 2240 KWKIKAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--EN 2076
              + +  KAL  I   ++++  E V +A + KEAW+ L + +   ++ K   LQ L  E 
Sbjct: 61   DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 2075 ELLSFRQGEMSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQ 1896
            E L  ++GE+ + +YF++V T+   +    +  K+ + +I   ++  L  ++   +  I+
Sbjct: 121  EALQMKEGEL-VSDYFSRVLTVTNNLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177

Query: 1895 GWPTQLSIVELENLLAD----------QEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
                 L  + +E LL            +E + +Q+             +  RG       
Sbjct: 178  E-TKDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGR 236

Query: 1745 WXXXXXXXXXXXXRCSQEGRARRGDRSS----KSHQSRRFDGT---CYNCGKKGHIARYC 1587
                            ++   +RG+ SS    K H   R+D +   CYNCGK GH A  C
Sbjct: 237  GRGGYGNGRGWRPH--EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294

Query: 1586 RSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCS 1407
            ++               +  +E+  + E   QEE+   +           + W +DSG S
Sbjct: 295  KAPSN------------KKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGAS 342

Query: 1406 NHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGM 1227
            NHM G K+ F  + E   R  V   D  K+ +   G   I  ++   +  + +VY +  M
Sbjct: 343  NHMCGRKSMFAELDE-SVRGNVALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSM 400

Query: 1226 KKNLLSVAQLTASGYHVVFGPSDVKIYRDVK---ISGAPVMEGRRLESVYVMLAETAFAE 1056
            K N+LS+ QL   GY +    +++ I RD +   I+  P+ + R    ++V+      A+
Sbjct: 401  KTNILSLGQLLEKGYDIRLKDNNLSI-RDQESNLITKVPMSKNR----MFVLNIRNDIAQ 455

Query: 1055 RTRK--NETADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLP 882
              +    E + LWH R GH+++  L+++  K M++GLP ++     VC GC  GK  ++ 
Sbjct: 456  CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMS 514

Query: 881  YD-ESKFRAKAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXX 705
            +  ES  RA+ PLEL+H+DV GP+K +S+    Y + FIDDFS+  W+ F+         
Sbjct: 515  FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574

Query: 704  XXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERK 525
                      E G  I+ +R+D GGE+T  +F ++  +N IR Q T P  PQQNGVVERK
Sbjct: 575  FKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERK 634

Query: 524  NRHLAEICRSMLHAKNVP---------------------------------GR------- 465
            NR + E+ RSML +K +P                                 GR       
Sbjct: 635  NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694

Query: 464  --FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
              FG + +  VP   RSK + K+ + IF+GYDN  KG+K  +P T K   SRN+V DE  
Sbjct: 695  RVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEG 754

Query: 290  SW-WSPQKEE---LPESKEMEDSLQKTGEQIAEIRMVPEESTELRDEEVTEDEPVR 135
             W W+  +E+    P  +E E    +      E    P   T  + EE + +   R
Sbjct: 755  EWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPR 810


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  292 bits (748), Expect = 1e-75
 Identities = 227/836 (27%), Positives = 374/836 (44%), Gaps = 81/836 (9%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVG-------ALK 2241
            MA+  V   +  L   NY  W   +++ L  +D+W++V    + P  E          L+
Sbjct: 1    MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 2240 KWKIKAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--EN 2076
              + +  KAL  I   ++++  E V +A + KEAW+ L + +   ++ K   LQ L  E 
Sbjct: 61   DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 2075 ELLSFRQGEMSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQ 1896
            E L  ++GE+ + +YF++V T+   +    +  K+ + +I   ++  L  ++   +  I+
Sbjct: 121  EALQMKEGEL-VSDYFSRVLTVTNNLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177

Query: 1895 GWPTQLSIVELENLLAD----------QEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
                 L  + +E LL            +E +++Q+             +  RG       
Sbjct: 178  E-TKDLEAMTIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGR 236

Query: 1745 WXXXXXXXXXXXXRCSQEGRARRGDRSS----KSHQSRRFDGT---CYNCGKKGHIARYC 1587
                            ++   +RG+ SS    K H   R+D +   CYNCGK GH A  C
Sbjct: 237  GRGGYGNGRGWRPH--EDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294

Query: 1586 RSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCS 1407
            ++               +  +E+ ++ E   QEE+   +        +  + W +DSG S
Sbjct: 295  KAPSN------------KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGAS 342

Query: 1406 NHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGM 1227
            NHM G K+ F  + E   R  V   D  K+ +   G   I  ++   +  + +VY +  M
Sbjct: 343  NHMCGRKSMFAELDE-SVRGNVALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSM 400

Query: 1226 KKNLLSVAQLTASGYHVVFGPSDVKIYRDVK---ISGAPVMEGRRLESVYVMLAETAFAE 1056
            K N+LS+ QL   GY +    +++ I RD +   I+  P+ + R    ++V+      A+
Sbjct: 401  KTNILSLGQLLEKGYDIRLKDNNLSI-RDQESNLITKVPMSKNR----MFVLNIRNDIAQ 455

Query: 1055 RTRK--NETADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLP 882
              +    E + LWH R GH+++  L+++  K M++GLP ++     VC GC  GK  ++ 
Sbjct: 456  CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMS 514

Query: 881  YD-ESKFRAKAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXX 705
            +  ES  RA+  LEL+H+DV GP+K +S+    Y + FIDDFS+  W+ F+         
Sbjct: 515  FPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574

Query: 704  XXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERK 525
                      E G  I+ +R+D GGE+T  +F ++  +N IR Q T P  PQQNGV ERK
Sbjct: 575  FKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERK 634

Query: 524  NRHLAEICRSMLHAKNVP---------------------------------GR------- 465
            NR + E+ RSML +K +P                                 GR       
Sbjct: 635  NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHL 694

Query: 464  --FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
              FG + +  VP   RSK + K+ + IF+GYDN  KG+K  +P T K   SRN+V DE  
Sbjct: 695  RVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEG 754

Query: 290  SW-WSPQKEE---LPESKEMEDSLQKTGEQIAEIRMVPEESTELRDEEVTEDEPVR 135
             W W+  +E+    P  +E E    +      E    P   T  + EE + +   R
Sbjct: 755  EWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPR 810


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  290 bits (743), Expect = 4e-75
 Identities = 226/836 (27%), Positives = 374/836 (44%), Gaps = 81/836 (9%)
 Frame = -2

Query: 2399 MANLQVVGGMEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEE-------VGALK 2241
            MA+  V   +  L   NY  W   +++ L  +D+W++V    + P  E          L+
Sbjct: 1    MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR 60

Query: 2240 KWKIKAGKALFAIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--EN 2076
              + +  KAL  I   ++++  E V +A + KEAW+ L + +   ++ K   LQ L  E 
Sbjct: 61   DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120

Query: 2075 ELLSFRQGEMSIREYFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQ 1896
            E L  ++GE+ + +YF++V T+   +    +  K+ + +I   ++  L  ++   +  I+
Sbjct: 121  EALQMKEGEL-VSDYFSRVLTVTNNLKR--NGEKLDDVRIMEKVLRSLDLKFEHIVTVIE 177

Query: 1895 GWPTQLSIVELENLLAD----------QEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDH 1746
                 L  + +E LL            +E +V+Q+             +  RG       
Sbjct: 178  E-TKDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGR 236

Query: 1745 WXXXXXXXXXXXXRCSQEGRARRGDRSS----KSHQSRRFDGT---CYNCGKKGHIARYC 1587
                            ++   +RG+ SS    K H   R+D +   CYNCGK GH A  C
Sbjct: 237  GRGGYGNGRGWRP--HEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASEC 294

Query: 1586 RSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCS 1407
            ++               +   E+ ++ E   QEE+   +        +  + W +DSG S
Sbjct: 295  KAPSN------------KKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGAS 342

Query: 1406 NHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGM 1227
            NHM G K+ F  + E   R  V   D  K+ +   G   I  ++   +  + +VY +  M
Sbjct: 343  NHMCGRKSMFAELDE-SVRGNVALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSM 400

Query: 1226 KKNLLSVAQLTASGYHVVFGPSDVKIYRDVK---ISGAPVMEGRRLESVYVMLAETAFAE 1056
            K N+LS+ QL   GY +    +++ I RD +   I+  P+ + R    ++V+      A+
Sbjct: 401  KTNILSLGQLLEKGYDIRLKDNNLSI-RDKESNLITKVPMSKNR----MFVLNIRNDIAQ 455

Query: 1055 RTRK--NETADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLP 882
              +    E + LWH R GH+++  L+++  K M++GLP ++     VC GC  G   ++ 
Sbjct: 456  CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGNQFKMS 514

Query: 881  Y-DESKFRAKAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXX 705
            +  ES  RA+ PLEL+H+DV GP+K +S+    Y + FIDDFS+  W+ F+         
Sbjct: 515  FPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEI 574

Query: 704  XXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERK 525
                      E G  I+ +R+D+GGE+T  +F ++  +N IR Q T P  PQQNGV ERK
Sbjct: 575  FKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERK 634

Query: 524  NRHLAEICRSMLHAKNVP---------------------------------GR------- 465
            NR + E+ RSML +K +P                                 GR       
Sbjct: 635  NRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHL 694

Query: 464  --FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
              FG + +  VP   R+K + K+ + IF+GYDN  KG+K  +P T K   SRN+V DE  
Sbjct: 695  RVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEG 754

Query: 290  SW-WSPQKEE---LPESKEMEDSLQKTGEQIAEIRMVPEESTELRDEEVTEDEPVR 135
             W W+  +E+    P  +E +    +      E    P   T  + EE + +   R
Sbjct: 755  EWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPR 810


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  282 bits (721), Expect = 1e-72
 Identities = 219/779 (28%), Positives = 350/779 (44%), Gaps = 72/779 (9%)
 Frame = -2

Query: 2348 YTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVGALKKWKIKAGKALFAIKTTIEKELLEH 2169
            Y  W   +++  +  DLWD+V      P EE   LK+   K  KALF I+  + + +   
Sbjct: 24   YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEA-RLKENTKKDSKALFFIQQAVHESIFSK 82

Query: 2168 VRDAGTPKEAWDTLSSLF---SKKNEFKLQLLEN--ELLSFRQGEMSIREYFTKVRTLCR 2004
            +  A T KEAW TL + F   SK    KLQ L    E L  + GE S++++F K      
Sbjct: 83   IAAATTAKEAWTTLKTAFQGSSKVITVKLQSLRRDFETLHMKNGE-SMQDFFVK------ 135

Query: 2003 EISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIVELENLLADQEMLVKQ 1824
                      I +  +   ++  L  ++   +AAI+     LS    + L+   +    +
Sbjct: 136  ---------NILDQTVVAKVLRSLTPKFDHVVAAIEE-SKDLSTYSFDELMGSLQS--HE 183

Query: 1823 IXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRC-SQEGRAR-RGD-----RS 1665
            +             F  +G  S   +                 + GR R RGD     R 
Sbjct: 184  VRLSRTEEKNEEKAFYTKGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGDAQGYQRQ 243

Query: 1664 SKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEE 1485
            S      + +  CY C + GH+   C  K+R               +++ ++ E   QEE
Sbjct: 244  STEKNRNKSNIQCYYCKRFGHVQXECWKKER--------------QEKQANYVE---QEE 286

Query: 1484 NEFALTVN-DPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKLPIT 1308
            ++  L +  + +V+   N W +DSGCSNHMTG K+ F+ + E    +V +  D     + 
Sbjct: 287  DQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDK---QVX 343

Query: 1307 HVGKTRILPRSSSKEVP-LQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKIYRDVKI 1131
              GK  +   +    V  L +VY +  + +NLLSV QL  SGY ++F  +   + +D K 
Sbjct: 344  VEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATC-VIKDKK- 401

Query: 1130 SGAPVMEGRRLESVYVMLAETAFAER----TRKNETADLWHARLGHVSYHKLKVMMAKSM 963
                ++   R+ +  +   E +  E+     ++   ++LWH R GH++   LK++  K M
Sbjct: 402  -SDQIIVNVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEM 460

Query: 962  LKGLPQLDVRTETVCAGCQYGKAHQLPYDESKF-RAKAPLELVHSDVFGPVKQRSISGLR 786
            + GLP++D  +  VC GC YGK  + P+ + +  RA + LE++H+D+ GP++  S  G R
Sbjct: 461  VFGLPKID--SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSR 518

Query: 785  YMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFS 606
            Y + F DD S+  W+ F+                   + GK I+ LRTD GGE+    F 
Sbjct: 519  YFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFK 578

Query: 605  QFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR------------- 465
             F  E  +  + T PY P+QNGV ERKNR + E+ RSM+ AKN+                
Sbjct: 579  VFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLL 638

Query: 464  -----------------------------FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDN 372
                                         FG V Y  + SH  S  ++K+++CIF+GY +
Sbjct: 639  NISPTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLIDSHNHSNLDEKSIKCIFIGYCS 698

Query: 371  QRKGWKCCDPTTGKCYTSRNVVLDEASSW-WSPQKE----------ELPESKEMEDSLQ 228
            Q KG+K  +P +GK   SRNVV DE +SW W   ++          E+ +S++ + S+Q
Sbjct: 699  QSKGYKLYNPVSGKIIVSRNVVXDEKASWTWRVSEDGALVEISSESEVAQSEDQQPSVQ 757


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  278 bits (710), Expect = 3e-71
 Identities = 215/769 (27%), Positives = 351/769 (45%), Gaps = 70/769 (9%)
 Frame = -2

Query: 2360 NNQNYTTWQTCVESYLQGYDLWDVV--GGDEVTPPEEVGALKKWK----IKAGKALFAIK 2199
            N ++Y  W+  + + L+   LWDV+  G    + PE   AL + +    +K   AL  ++
Sbjct: 13   NGESYGFWKIKMITILKTRKLWDVIENGVTSNSSPETSPALTRERDDQVMKDMMALQILQ 72

Query: 2198 TTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFK---LQLL--ENELLSFRQGEMSIRE 2034
            + +   +   +  A +  EAW+ L   F   ++ K   LQ L  E E L   +GE +I +
Sbjct: 73   SAVSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYENLKMEEGE-TIND 131

Query: 2033 YFTKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWP--TQLSIVELE 1860
            + TK+  L  ++  +    K     +++I+I  + Q++ S +  ++     + LS+ EL 
Sbjct: 132  FTTKLINLSNQL-RVHGEEKSDYQVVQKILI-SVPQQFDSIVGVLEQTKDLSTLSVTELI 189

Query: 1859 NLLADQEMLVKQIXXXXXXXXXXXALFSNRG-------RPSRHDHWXXXXXXXXXXXXRC 1701
              L   E  +                  +RG       R  + + W             C
Sbjct: 190  GTLKAHERRLNLREDRINEGAFNGEKLGSRGENKQNKIRHGKTNMWCGVCKRNNHNEVDC 249

Query: 1700 SQEGRARRGDRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDE 1521
                   R    S S +   ++  CY C K+GHIAR C+ +K       A LS  +  DE
Sbjct: 250  F------RKKSESISQRGGSYERRCYVCDKQGHIARDCKLRK----GERAHLSIEESEDE 299

Query: 1520 EWDFEEPL--AQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRR 1347
            + D    L  A EE E + T+        E  W++DSGC+NHM+ D   F  +   + ++
Sbjct: 300  KEDECHMLFSAVEEKEIS-TIG-------EETWLVDSGCTNHMSKDVRHF--IALDRSKK 349

Query: 1346 VVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFG 1167
            +++   N    ++  GK  I   ++  +  ++DV  V  + +NLLSV+Q+ ++GY V+F 
Sbjct: 350  IIIRIGNGGKVVSE-GKGDIRVSTNKGDHVIKDVLYVPELARNLLSVSQMISNGYRVIFE 408

Query: 1166 PSDVKIYRDVKISGAPV----MEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVS 999
             +   I +D+K  G  +    M+ R    ++    E  +     K E  DLWH R GHV+
Sbjct: 409  DNKCVI-QDLK--GRKILDIKMKDRSFPIIWKKSREETYMAFEEKEEQTDLWHKRFGHVN 465

Query: 998  YHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDE-SKFRAKAPLELVHSDVF 822
            Y K++ M    +++ LP+ +V  + +CA C+ GK  +  + + S+      LEL+HSDV 
Sbjct: 466  YDKIETMQTLKIVEKLPKFEV-IKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVC 524

Query: 821  GPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRT 642
            GP++  SI+G RY +TFIDDFS+  W+ F+                   +   +I+ LRT
Sbjct: 525  GPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRT 584

Query: 641  DNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR- 465
            D GGE+   +F +  +E+ I H+ T PY PQQNGV ER+NR L E+ RSM+  K +  + 
Sbjct: 585  DGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKF 644

Query: 464  ------------------------------------------FGCVCYVFVPSHLRSKFE 411
                                                      FGCVCY+ +P   R K +
Sbjct: 645  WAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLD 704

Query: 410  KKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSWWSPQKEE 264
             KA + IFVGY N+ KG++       K   S++V  DE  +W   +K E
Sbjct: 705  TKAKQGIFVGYSNESKGYRVFLLNEEKIEVSKDVTFDEKKTWSHDEKGE 753


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  277 bits (708), Expect = 5e-71
 Identities = 221/784 (28%), Positives = 341/784 (43%), Gaps = 85/784 (10%)
 Frame = -2

Query: 2354 QNYTTWQTCVESYLQGYDLWDVV-------GGDEVTPPEEVGALKKWKIKAGKALFAIKT 2196
            +NY  W   + + L    LWD+V          E    E+  +L + ++   KALF I+ 
Sbjct: 12   ENYDIWSIKMRTLLLSQGLWDIVDNGYQEYSAGETLTAEQKKSLAEDRMSDAKALFLIQQ 71

Query: 2195 TIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEF---KLQLLENELLSFRQGEMS-IREYF 2028
             + + L   +  A   KEAWD L   F    +    KLQ L  +  +    E   +++YF
Sbjct: 72   GVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDYF 131

Query: 2027 TKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWP--TQLSIVELENL 1854
            ++V  +  ++        I + K+   I+  L ++Y   +AAI+     + L+I +L + 
Sbjct: 132  SRVIEIVNQMRLYGED--INDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSS 189

Query: 1853 LADQEMLVKQIXXXXXXXXXXXAL------------FSNRGRPSRHDHWXXXXXXXXXXX 1710
            L   E    Q             L            F   G P R   +           
Sbjct: 190  LESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFSTQ-- 247

Query: 1709 XRCSQEGRARRGDRSSKSH--------QSRRFDG-----TCYNCGKKGHIARYCRSKKRM 1569
                ++G+ RR   +S S+         S   D      TC  C +KGHIA+YCR++   
Sbjct: 248  ---KEDGQERREKSTSSSNLWCDISQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTR--- 301

Query: 1568 TESNIATLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGD 1389
             E N A  S  +   EE  F    AQEE +              + W+IDSGC+NHM  D
Sbjct: 302  -EINRANFSQEKEKSEEMVFSCHTAQEEKD--------------DVWVIDSGCTNHMAAD 346

Query: 1388 KTKFQNMVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLS 1209
               F+ M      ++ +   +I       GK  +  +++     ++DV  V  +K+NLLS
Sbjct: 347  PNLFREMDSLYHAKIHMGNGSIA---QSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLS 403

Query: 1208 VAQLTASGYHVVFGPSDVKIY--RDVKISGAPVMEGRRLESVYVMLAETAFAERTRKNET 1035
            + QL   GY V F     KI   ++ ++     ME  R  +  + +  T       + + 
Sbjct: 404  IGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNR--NFLLRMNHTTQMALRSEVDI 461

Query: 1034 ADLWHARLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDES-KFRA 858
            +DLWH R+GH++Y  LK++  K M++GLP + ++++  C GC +GK  Q  +  S  +RA
Sbjct: 462  SDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIQASFPHSGAWRA 520

Query: 857  KAPLELVHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXX 678
             AP ELVH+D+ G V   S  G  Y ITFIDD+++ IW+ F+                  
Sbjct: 521  SAPFELVHTDIVGKVPTMSEGGNWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVE 580

Query: 677  XEIGKKIQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICR 498
             +  +KI+ LR+D GGEY   +F ++     IR Q T  Y  QQNGV ERKNR + ++  
Sbjct: 581  NQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMAN 640

Query: 497  SMLHAKNVPGR------------------------------------------FGCVCYV 444
            SML  K +P                                            F C+CY 
Sbjct: 641  SMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFACICYA 700

Query: 443  FVPSHLRSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSW-W-SPQK 270
             VP+  R KF+ K+ RCIFVGY +  KG++  +    K   SR+V  DE+++W W SP+ 
Sbjct: 701  QVPAQKRVKFDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDESATWNWKSPEA 760

Query: 269  EELP 258
               P
Sbjct: 761  SSTP 764


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  270 bits (689), Expect = 8e-69
 Identities = 228/799 (28%), Positives = 345/799 (43%), Gaps = 66/799 (8%)
 Frame = -2

Query: 2354 QNYTTWQTCVESYLQGYDLWDVV-------GGDEVTPPEEVGALKKWKIKAGKALFAIKT 2196
            +NY  W   + + L    LWD+V          E    E+  +L + ++   KALF I+ 
Sbjct: 12   ENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKALFLIQQ 71

Query: 2195 TIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGEMSIREYFTKVR 2016
             + + L   +  A   KEAWD L      K EF             QG   +R Y     
Sbjct: 72   GVAESLFPRIIGAKKSKEAWDKL------KEEF-------------QGSQKMRLY----- 107

Query: 2015 TLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIV--ELENLLADQ 1842
                          I + K+   I+  L ++Y   +AAI+     L++   +L + L   
Sbjct: 108  -----------GEDINDQKVVEKILISLPEKYEYIVAAIEESKDMLTLTIQQLMSSLESH 156

Query: 1841 EMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEGRARRGDRSS 1662
            E    Q             L S R + SR                   + G +R+ +   
Sbjct: 157  EERKLQREGSSIENAFQSKL-SFRPQNSRFRGNFQKNEFPMRDRGYFQKNGFSRQKEDGQ 215

Query: 1661 KSHQSRRF--DGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPLAQE 1488
            +  +        TC  C +KGHIA+YCR++    E N A  S  +   EE  F    AQE
Sbjct: 216  ERREKDMCWKKMTCNKCKRKGHIAKYCRTR----EINRANFSQEKEKSEEMVFSCHTAQE 271

Query: 1487 ENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKLPIT 1308
            E +              + W+IDSGC+NHM  D   F+ M      ++ +   +I     
Sbjct: 272  EKD--------------DVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIA---Q 314

Query: 1307 HVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKIY-RDVKI 1131
              GK  +  +++     ++DV  V  +K+NLLS+ QL   GY V F     KI  R    
Sbjct: 315  SEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNR 374

Query: 1130 SGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMMAKSMLKGL 951
              A +   + +  +  M   T  A R+ + + +DLWH R+GH++Y  LK++  K M++GL
Sbjct: 375  LVAKINMEKNINFLLRMNHPTQMALRS-EIDISDLWHKRMGHLNYRALKLLRTKGMVQGL 433

Query: 950  PQLDVRTETVCAGCQYGKAHQLPYDES-KFRAKAPLELVHSDVFGPVKQRSISGLRYMIT 774
            P + ++++  C GC +GK  +  +  S  +RA APLELVH+D+ G V   S  G  Y IT
Sbjct: 434  PFITLKSDP-CEGCVFGKQIRASFPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFIT 492

Query: 773  FIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLR 594
            FIDD+++ IW+ F+                   +  +KI+ LR+D GGEY   +F ++  
Sbjct: 493  FIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCE 552

Query: 593  ENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR----------------- 465
               IR Q T  Y  QQNGV ERKNR + ++  SML  K +P                   
Sbjct: 553  NAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRSP 612

Query: 464  -------------------------FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKG 360
                                     FGC+CY  VP+  R KF+ K+ RCIFVGY +  KG
Sbjct: 613  TKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKG 672

Query: 359  WKCCDPTTGKCYTSRNVVLDEASSW-WSPQKEELPESK-----EMEDSLQKTGEQIAEIR 198
            ++  +    K   SR+V+ DE+++W W   +  + E +     E  D+  K  E   EI 
Sbjct: 673  YRLYNLEKKKIIISRDVIFDESATWNWKSPEASIVEPQSFQEAEKHDNWIKAMED--EIH 730

Query: 197  MVPEEST-EL----RDEEV 156
            M+ + +T EL    RD EV
Sbjct: 731  MIEKNNTWELVDRPRDREV 749


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  270 bits (689), Expect = 8e-69
 Identities = 217/778 (27%), Positives = 338/778 (43%), Gaps = 79/778 (10%)
 Frame = -2

Query: 2354 QNYTTWQTCVESYLQGYDLWDVV-------GGDEVTPPEEVGALKKWKIKAGKALFAIKT 2196
            +NY  W   + + L    LWD+V          E    E+  +L + ++   KALF I+ 
Sbjct: 12   ENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSDAKALFLIQQ 71

Query: 2195 TIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEF---KLQLLENELLSFRQGEMS-IREYF 2028
             + + L   +  A   KEAWD L   F    +    KLQ L  +  +    E   +++YF
Sbjct: 72   GVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDYF 131

Query: 2027 TKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIVELENLLA 1848
            ++V  +  ++        I + K+   I+  L ++Y   +AA +     LS   LE+   
Sbjct: 132  SRVIEIVNQMRLYGED--INDQKVVEKILISLPEKYEYIVAATEE-SKDLSKDSLESHEE 188

Query: 1847 DQ--------EMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQE 1692
             +        E   +               F   G P R   +               ++
Sbjct: 189  RKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFSRQ-----KED 243

Query: 1691 GRARRGDRSSKSH--------QSRRFDG-----TCYNCGKKGHIARYCRSKKRMTESNIA 1551
            G+ RR   +S S+         S   D      TC  C +KGHIA+YCR++    E N A
Sbjct: 244  GQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTR----EINRA 299

Query: 1550 TLSAAQMSDEEWDFEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQN 1371
              S  +   EE  F    AQEE +              + W+IDSGC+NHM  D   F+ 
Sbjct: 300  NFSQEKEKSEEMVFSCHTAQEEKD--------------DVWVIDSGCTNHMAADPNLFRE 345

Query: 1370 MVEYKGRRVVVTADNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTA 1191
            M      ++ +   +I       GK  +  +++     ++DV  V  +K+NLLS+ QL  
Sbjct: 346  MDSSYHAKIHMGNGSIA---QSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLE 402

Query: 1190 SGYHVVFGPSDVKIY--RDVKISGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHA 1017
             GY V F     KI   ++ ++     ME  R  +  + +  T       + + +DLWH 
Sbjct: 403  HGYAVYFEDFSCKILDRKNNRLVAKINMEKNR--NFLLRMNHTTQMALRSEVDISDLWHK 460

Query: 1016 RLGHVSYHKLKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDES-KFRAKAPLEL 840
            R+GH++Y  LK++  K M++GLP + ++++  C GC +GK  +  +  S  +RA APLEL
Sbjct: 461  RMGHLNYRALKLLRTKGMVQGLPFITLKSDP-CEGCVFGKQIRASFPHSGAWRASAPLEL 519

Query: 839  VHSDVFGPVKQRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKK 660
            VH+D+ G V   S  G  Y ITFIDD+++ IW+ F+                   +  +K
Sbjct: 520  VHADIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRK 579

Query: 659  IQCLRTDNGGEYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAK 480
            I+ LR+D G EY   +F ++     IR Q T  Y  QQNGV ERKNR + ++  SML  K
Sbjct: 580  IKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDK 639

Query: 479  NVPGR------------------------------------------FGCVCYVFVPSHL 426
             +P                                            FGC+CY  VP+  
Sbjct: 640  GMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQK 699

Query: 425  RSKFEKKAVRCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSW-W-SPQKEELP 258
            R KF+ K+ RCIFVGY +  KG++  +    K   SR+ + DE+++W W SP+    P
Sbjct: 700  RVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSPEASSTP 757


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  264 bits (674), Expect = 4e-67
 Identities = 213/745 (28%), Positives = 334/745 (44%), Gaps = 55/745 (7%)
 Frame = -2

Query: 2354 QNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVGALKKWKIKAGKALFAIKTTIEKELL 2175
            +NY  W   +++  +  +LWD+V  +   P      +++ + +  KALF I+  ++ E+ 
Sbjct: 20   ENYQFWSLKMKTLFKSQELWDIV--ETGIPEGNANQMREHRKRDSKALFTIQQALDDEIF 77

Query: 2174 EHVRDAGTPKEAWDTLSSLF---SKKNEFKLQLLENELLS-FRQGEMSIREYFTKVRTLC 2007
              +    T K+AW+ L   +    K    KLQ L  +  + F     S++ Y ++   + 
Sbjct: 78   PRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIV 137

Query: 2006 REISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWP--TQLSIVEL-ENLLADQEM 1836
              +       KI    +   ++  L  ++   + AI+     +  S  EL  +LLA ++ 
Sbjct: 138  NRMRSYGE--KIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSLLAHEDR 195

Query: 1835 LVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEGRARRGD-RSSK 1659
            L +               FS +G+                     S  GR + G+ R  K
Sbjct: 196  LNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEFRQYK 255

Query: 1658 SHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEENE 1479
            S+   R+      C K GH    C +K++               DE+ D       EE E
Sbjct: 256  SNIQCRY------CKKFGHKEVDCWTKQK---------------DEQKDANFTQNVEE-E 293

Query: 1478 FALTVNDPKVIDYEND-WIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKLPITHV 1302
              L +   ++ +  N  W IDSGCSNHM+  K+ F+++ E +   V +  D+ ++ I   
Sbjct: 294  SKLFMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRL-GDDKQVHIEGK 352

Query: 1301 GKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVF--GPSDVKIYRDVK-I 1131
            G   I     + +  L DV  V  +  NLLSV QL  SGY VVF     D+K     + I
Sbjct: 353  GTVEIKTVQGNVKF-LYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTI 411

Query: 1130 SGAPVMEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMMAKSMLKGL 951
            +  P+ + +        +  +A   +  KNET +LWH R GH++ + LK+++ K M+ GL
Sbjct: 412  ARVPMTQNKMFPLDISNVGNSALVVK-EKNET-NLWHLRYGHLNVNWLKLLVQKDMVIGL 469

Query: 950  PQLDVRTETVCAGCQYGKAHQLPYDESK-FRAKAPLELVHSDVFGPVKQRSISGLRYMIT 774
            P  +++   +C GC YGK  +  +   K +RA   LELVH+D+ GP+K  S+ G RY + 
Sbjct: 470  P--NIKELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLM 527

Query: 773  FIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFLR 594
            F DD+S++ W+ F+                   + G KI+ LRTD GGE+    F+ F  
Sbjct: 528  FTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCE 587

Query: 593  ENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR----------------- 465
            EN IR + T PY P+QNGV ERKNR + E+ RS L AK +P                   
Sbjct: 588  ENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISP 647

Query: 464  -------------------------FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRKG 360
                                     FGC+ Y  V  H  SK ++K+ +CIFVGY  Q K 
Sbjct: 648  TKDVWNTTPLEAWNGKKPRVSHLRIFGCIAYALVNFH--SKLDEKSTKCIFVGYSLQSKA 705

Query: 359  WKCCDPTTGKCYTSRNVVLDEASSW 285
            ++  +P +GK   SRNVV +E  SW
Sbjct: 706  YRLYNPISGKVIISRNVVFNEDVSW 730


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  261 bits (666), Expect = 4e-66
 Identities = 200/756 (26%), Positives = 338/756 (44%), Gaps = 64/756 (8%)
 Frame = -2

Query: 2366 KLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTP------PEEVGALKKWKIKAGKALF- 2208
            KL ++NY  W++  ES+L G  L   V G    P      P++ G  +       +A F 
Sbjct: 22   KLTDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGVTEAIPNPDYQAWFR 81

Query: 2207 AIKTTIEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGEMSIREYF 2028
            + +  + +++L  V  + T  E W  L+  F++ +  ++  L+  L S  +   ++ EY 
Sbjct: 82   SDQVVMSEDILSVVVGSKTSHEVWMNLAKHFNRISSSRIFELQRRLHSLSKEGKTMEEYL 141

Query: 2027 TKVRTLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGW------PTQLSIV- 1869
              ++T+C +++ + S   + E      ++HGL +EY   I +++G       P+   +V 
Sbjct: 142  RYLKTICDQLASVGSP--VAEKMKIFAMVHGLTREYEPLITSLEGTLDAFPGPSYEDVVY 199

Query: 1868 ELENLLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEG 1689
             L+N   D  +    +              SNRGR  R++                S  G
Sbjct: 200  RLKNF--DDRLQGYTVTDVSPHLAFNTFRSSNRGRGGRNNRGKGNF----------STRG 247

Query: 1688 RA-RRGDRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWD 1512
            R  ++   SS S  S      C  CGK+GH A  C  +                 D+ + 
Sbjct: 248  RGFQQQFSSSSSSVSASEKPMCQICGKRGHYALQCWHR----------------FDDSYQ 291

Query: 1511 FEEPLAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTA 1332
              E  A   +  AL + D   +  ++ W+ DS  + H+T + ++ Q M  Y G   V+ +
Sbjct: 292  HSEAAAAAFS--ALHITD---VSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMAS 346

Query: 1331 DNIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVK 1152
            D   LPITH+G   +   S+S  +PL+DV     + K+LLSV++LT          +D  
Sbjct: 347  DGNFLPITHIGSANL--PSTSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGV 404

Query: 1151 IYRD-----VKISGAPVMEGR-RLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHK 990
            + +D     V   G+   EG  +LE+    +    F    +   T ++WH RLGH +   
Sbjct: 405  LVKDKATCKVLTKGSSTSEGLYKLENPKFQM----FYSTRQVKATDEVWHMRLGHPNPQV 460

Query: 989  LKVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDESKFRAKAPLELVHSDVFGPVK 810
            L+++  K  +    Q++  T  +C  C+ GK+ +LP+  S F A  PLE VH D++GP  
Sbjct: 461  LQLLANKKAI----QINKSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAP 516

Query: 809  QRSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGG 630
              SI G +Y + FID+ S++ W   +                    +  KI   ++D GG
Sbjct: 517  VSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGG 576

Query: 629  EYTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR----- 465
            E+T  +F Q L+E+ I+H  +CP+ PQQNG+ ERK+R L E   +++     P R     
Sbjct: 577  EFTSNRFLQHLQESGIQHYISCPHTPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVEA 636

Query: 464  --------------------------------------FGCVCYVFVPSHLRSKFEKKAV 399
                                                  FGC C+  + ++ R+KF+ +++
Sbjct: 637  FFTANFLSNLLPTSALDSSTTPYQVLFGKAPDYSALRTFGCACFPTLRAYARNKFDPRSL 696

Query: 398  RCIFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEAS 291
            +CIF+GY  + KG++C  P T + Y SR+V+ DE+S
Sbjct: 697  KCIFLGYTEKYKGYRCFFPPTNRVYLSRHVLFDESS 732


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  259 bits (661), Expect = 1e-65
 Identities = 217/807 (26%), Positives = 353/807 (43%), Gaps = 67/807 (8%)
 Frame = -2

Query: 2348 YTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVG----------ALKKWKIKAGKALFAIK 2199
            Y  W   +E++L+  +LW +V  +E  P   VG          A+++ K+K  K    + 
Sbjct: 19   YDFWSMTMENFLRSRELWRLV--EEGIPAIVVGTTPVSEAQRSAVEEAKLKDLKVKNFLF 76

Query: 2198 TTIEKELLEHVRDAGTPKEAWDTLSSLF---SKKNEFKLQLL--ENELLSFRQGEMSIRE 2034
              I++E+LE + D  T K  W+++   +   +K    +LQ L  E ELL+ ++GE  I  
Sbjct: 77   QAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKEGE-KIDT 135

Query: 2033 YFTKVRTLCREISELDSTSKIPE-SKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIVELEN 1857
            +  +  T+   ++++ +  ++ E S I   I+  L  ++   + +I+     LS + ++ 
Sbjct: 136  FLGRTLTV---VNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEE-SNDLSTLSIDE 191

Query: 1856 LLADQEMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEGRARR 1677
            L     +LV +               ++  RPS+                     GR R 
Sbjct: 192  L--HGSLLVHEQRLNGHVQEEQALKVTHEERPSQ----------GRGRGVFRGSRGRGRG 239

Query: 1676 GDRSSKSHQSRRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPL 1497
              RS     + R    CY C   GH    C   ++   +N A L                
Sbjct: 240  RGRSG----TNRAIVECYKCHNLGHFQYECPEWEK--NANYAELE--------------- 278

Query: 1496 AQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKL 1317
             +EE    +   +    + +  W +DSGCSNHMTG K  F  + E   R V +  D  ++
Sbjct: 279  -EEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDT-RM 336

Query: 1316 PITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKIYRDV 1137
             +   G  ++     ++ +P  +VY V  ++ NLLS+ QL   G  ++      K+Y   
Sbjct: 337  SVVGKGSVKVKVNGVTQVIP--EVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPS 394

Query: 1136 KISGAPVMEGRRLESVYVMLA----ETAFAERTRK--NETADLWHARLGHVSYHKLKVMM 975
            K  GA +        ++ +LA    + +   +T +  ++   LWH R GH++   LK++ 
Sbjct: 395  K--GAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLA 452

Query: 974  AKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYD-ESKFRAKAPLELVHSDVFGPVKQRSI 798
             K M+ GLP L   T+ +CA C  GK H+     ++ +++   L+LVHSD+ GP+   S 
Sbjct: 453  HKKMVIGLPILKA-TKEICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISH 511

Query: 797  SGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTL 618
            SG RY+++FIDDF++  W+ F+                   EIG  + CLRTD GGE+T 
Sbjct: 512  SGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTS 571

Query: 617  VKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVP----------- 471
             +F +F R + I  Q T  + PQQNGV ERKNR +    RSML  + VP           
Sbjct: 572  NEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWS 631

Query: 470  ----------------------GR---------FGCVCYVFVPSHLRSKFEKKAVRCIFV 384
                                  GR         FGC+ YV +P   RSK + K+ +C+F+
Sbjct: 632  VHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFL 691

Query: 383  GYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSW-WSPQKEELPE-SKEMEDSLQKTGEQI 210
            G   + K W+  DP   K   S++VV DE  SW W     E  E + E  D   +   ++
Sbjct: 692  GVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEV 751

Query: 209  AEIRMVPEESTELRDEEVTEDEPVRSP 129
             E   V   +    D  V+   P+ +P
Sbjct: 752  VEPIAVASPNHVGSDNNVS-SSPILAP 777


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  257 bits (656), Expect = 5e-65
 Identities = 226/803 (28%), Positives = 348/803 (43%), Gaps = 60/803 (7%)
 Frame = -2

Query: 2372 MEKLNNQNYTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVGALKKWKIKAGKALFAIKTT 2193
            +EK N + ++ W+  + + L+  +  D + G      +E     KWK     A+  +   
Sbjct: 7    IEKFNGRKFSLWKLKIRAILRKDNCLDAIDGRPADITDE-----KWKEMDDNAVANLHLA 61

Query: 2192 IEKELLEHVRDAGTPKEAWDTLSSLFSKKNEFKLQLLENELLSFRQGE-MSIREYFTKVR 2016
            +   +L  + +  T KE WDTL  L+  K+      L+  L + R GE  S+ ++   + 
Sbjct: 62   MADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLN 121

Query: 2015 TLCREISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAI--QGWPTQLSIVELENLLADQ 1842
            TL  +++  D   KI E++   +++  L   Y   I  I        L   ++   + ++
Sbjct: 122  TLFSQLTASD--FKIAENERAELLLQSLPDSYDQLIINITNNNIADTLHFDDVAGAILEE 179

Query: 1841 EMLVKQIXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRCSQEGRARRGDRSS 1662
            E   K             AL   RGR +                          RG   S
Sbjct: 180  ESRRKNKEERSESSKQAEALTMTRGRST-------------------------ERGPSGS 214

Query: 1661 KSH---QSRRFDG-TCYNCGKKGHIARYCRSKKRMTESNI-ATLS----AAQMSDEEWDF 1509
            ++H   +SRR +   CY CG KGH+ + C + K+  E N  AT S    A+   D E  +
Sbjct: 215  QNHGRSKSRRKNNIKCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILY 274

Query: 1508 EEPLAQEENEFALTVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTAD 1329
             E     E E  L  ND         WI+DSG + HMT  +  F +        V +  D
Sbjct: 275  SEAATSSEGERQL--NDV--------WIMDSGATWHMTPHRDWFYSYEPISEGSVYMGND 324

Query: 1328 NIKLPITHVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKI 1149
            +  L I  VG  R+     +    +Q V  V+G+KKNLLSV QL   G  +    S+  I
Sbjct: 325  H-ALEIAGVGTIRLKMHDGTVR-KIQGVRHVKGLKKNLLSVGQLDDLGCKI---HSESGI 379

Query: 1148 YRDVKISGAPVMEGRRLES-VYVMLAET-----AFAERTRKNETADLWHARLGHVSYHKL 987
             + VK     VM+  ++ S +Y++L +T     A      + ET  +WH RLGH+S   L
Sbjct: 380  LKVVK-GNLVVMKAEKITSNLYMLLGDTLQEADASVAAASQEETTMMWHQRLGHMSERGL 438

Query: 986  KVMMAKSMLKGLPQLDVRTETVCAGCQYGKAHQLPYDESKFRAKAPLELVHSDVFGPVKQ 807
            KV++ +++L GL  +++     C  C   K H+L +     R+K  L+L+HSDV+   K 
Sbjct: 439  KVLVERNLLHGLKTVNL---PFCEHCVISKQHRLKFARVTTRSKHILDLIHSDVWESPK- 494

Query: 806  RSISGLRYMITFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGE 627
             S+ G RY ++FIDD+S+ +W+  +                   E GKKI+CLRTDNGGE
Sbjct: 495  LSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGE 554

Query: 626  YTLVKFSQFLRENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR------ 465
            Y   +F  F ++  I  Q+T  + PQQNGV ER NR L E  R+ML    +         
Sbjct: 555  YVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAV 614

Query: 464  ------------------------------------FGCVCYVFVPSHLRSKFEKKAVRC 393
                                                FGC  YV   S  R+K + K+ +C
Sbjct: 615  KTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKC 674

Query: 392  IFVGYDNQRKGWKCCDPTTGKCYTSRNVVLDEASSWWSPQKEELPESKEMEDSLQKTGEQ 213
            IF+GY +  KG++  DPT  K   SR+VV  E          EL   ++ + + ++T   
Sbjct: 675  IFLGYADNVKGYRLWDPTARKVVVSRDVVFAE---------NELQSEQKNDSTFKETA-- 723

Query: 212  IAEIRMVPEESTELRDEEVTEDE 144
            I +I    +ES     E V E++
Sbjct: 724  ILQIEEKSKESDSSEAESVHEEQ 746


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  256 bits (655), Expect = 7e-65
 Identities = 211/776 (27%), Positives = 344/776 (44%), Gaps = 69/776 (8%)
 Frame = -2

Query: 2348 YTTWQTCVESYLQGYDLWDVVGGDEVTPPEEVGALKKWKIKAGKALFAIKTTIEKELLEH 2169
            Y  W   +++  +  DLWD+V      P EE   LK+   K  KALF I+  I + +   
Sbjct: 138  YEFWSIKMKTLFKSQDLWDLVENGYPYPDEEA-RLKENTKKDSKALFFIQQAIHESIFSK 196

Query: 2168 VRDAGTPKEAWDTLSSLF---SKKNEFKLQLLEN--ELLSFRQGEMSIREYFTKVRTLCR 2004
            +  A T KEAW TL + F   SK    KLQ L    E L  + GE S +++ ++V  +  
Sbjct: 197  IAVATTAKEAWTTLETAFQGSSKVITVKLQSLRRDFETLHMKNGE-SXQDFLSRVAAIVN 255

Query: 2003 EISELDSTSKIPESKIRRIIIHGLRQEYRSFIAAIQGWPTQLSIVELENLLADQEMLVKQ 1824
            ++        I +  +   ++  L  ++   +A I+     LS    + L+   +    +
Sbjct: 256  QMRSYG--EDILDQTVVAKVLRSLTPKFDHVVAXIEE-SKDLSTYSFDELMGSLQS--HE 310

Query: 1823 IXXXXXXXXXXXALFSNRGRPSRHDHWXXXXXXXXXXXXRC-SQEGRAR-RGDRSSKSHQ 1650
            +             F  +G  S   +                 + GR R RGD      Q
Sbjct: 311  VRLSXTEDKNEEKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGDAQGDQRQ 370

Query: 1649 S-----RRFDGTCYNCGKKGHIARYCRSKKRMTESNIATLSAAQMSDEEWDFEEPLAQEE 1485
            S      + +  CY C + GH+   C  K+R               +++ ++ E   QEE
Sbjct: 371  STEKSRNKSNIXCYYCKRFGHVQAECWKKER--------------QEKQANYVE---QEE 413

Query: 1484 NEFAL-TVNDPKVIDYENDWIIDSGCSNHMTGDKTKFQNMVEYKGRRVVVTADNIKLPIT 1308
            ++  L    + +V+   N W +DSGCSNHMTG K+ F+ + E   +  V   D+ ++ + 
Sbjct: 414  DQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDE-SHKLXVKLGDDXQVQVE 472

Query: 1307 HVGKTRILPRSSSKEVPLQDVYRVQGMKKNLLSVAQLTASGYHVVFGPSDVKIYRDVKIS 1128
              G   +     + ++ L +VY +  + + L+             +     +I  DV+++
Sbjct: 473  GKGTVAVNNGHGNVKL-LYNVYFIPSLTEKLVKCG--------ATYDKKSDQIIVDVRMA 523

Query: 1127 GAPV--MEGRRLESVYVMLAETAFAERTRKNETADLWHARLGHVSYHKLKVMMAKSMLKG 954
               +  +E   +E   +++ ET+          ++LWH R GH++   LK++  K M+  
Sbjct: 524  ANKLFPLEVSSIEKHALVVKETS---------ESNLWHLRYGHLNVKGLKLLSKKEMVFE 574

Query: 953  LPQLDVRTETVCAGCQYGKAHQLPYDESKF-RAKAPLELVHSDVFGPVKQRSISGLRYMI 777
            LP++D  +  VC GC YGK  + P+ + +  RA + LE++H+D+ GP++  S  G RY +
Sbjct: 575  LPKID--SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFL 632

Query: 776  TFIDDFSQYIWILFMXXXXXXXXXXXXXXXXXXXEIGKKIQCLRTDNGGEYTLVKFSQFL 597
             F DD S+  W+ F+                   + GK I+ LRTD  GE+    F  F 
Sbjct: 633  LFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFC 692

Query: 596  RENHIRHQYTCPYMPQQNGVVERKNRHLAEICRSMLHAKNVPGR---------------- 465
             E  +  + T PY P+QNGV ERKNR + E+ RSM+ AKN+                   
Sbjct: 693  EEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNIS 752

Query: 464  --------------------------FGCVCYVFVPSHLRSKFEKKAVRCIFVGYDNQRK 363
                                      FG V Y    SH RSK ++K+V+CIF+GY +Q K
Sbjct: 753  PTKAVLNRTPYEAWYGRKPWVSHLKVFGSVAYTLXBSHNRSKLDEKSVKCIFIGYCSQSK 812

Query: 362  GWKCCDPTTGKCYTSRNVVLDE-ASSWWSPQKE----------ELPESKEMEDSLQ 228
            G+K  +P +GK   SRNVV DE AS  W   ++          E+ +S++ + S+Q
Sbjct: 813  GYKLYNPVSGKIIVSRNVVFDEKASXTWRVSEDGALVEISSESEMAQSEDQQPSVQ 868