BLASTX nr result
ID: Mentha23_contig00000301
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00000301
(1782 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250... 104 1e-19
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera] 83 4e-13
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] 80 2e-12
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615... 78 1e-11
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] 78 1e-11
emb|CAN79864.1| hypothetical protein VITISV_038293 [Vitis vinifera] 74 2e-10
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera] 74 3e-10
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ... 73 4e-10
gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsi... 70 2e-09
emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera] 69 7e-09
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera] 69 9e-09
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 67 2e-08
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera] 67 3e-08
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 67 3e-08
gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japo... 66 4e-08
gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group... 66 4e-08
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 66 6e-08
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ... 66 6e-08
dbj|BAG72152.1| hypothetical protein [Lotus japonicus] 66 6e-08
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 66 6e-08
>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
Length = 1406
Score = 104 bits (259), Expect = 1e-19
Identities = 85/311 (27%), Positives = 128/311 (41%), Gaps = 68/311 (21%)
Frame = -1
Query: 921 TFHHLRVLASRHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXX 772
T L + RH Y PQTD +L+A+T+ KP +W ++ W +
Sbjct: 427 TLFQLSGTSLRHSTTYHPQTDGQSEVVNRGLEQYLRAFTNEKPHSWISFLGWAEFCYNSS 486
Query: 771 XXXSIRMTPFHTLYGRRPPNLPLYIQRPANNQAVAE------------------------ 664
++MTPF L+GR PP +P Y Q + QA+ E
Sbjct: 487 YHSGLKMTPFKALFGRPPPIIPAYTQGSTSIQALDEALVERDALLRTLKENLRQAQHRMT 546
Query: 663 ---------VQLHEEDQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLE 511
+QL D L RLQP++Q + + KLA+R+Y P V+ ++G VA RL
Sbjct: 547 QKSNAHRRDLQLEVGDMVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIGAVAYRLA 606
Query: 510 LLSTSWMHSGLHNSTLKFVKCAVGAKSCTLPPESHNSNTRVVMLSICSTRDVLSTERV-- 337
L S +H H S K + V + LP E+ + +V+ ++C+ R +L +
Sbjct: 607 LPSGCKIHPMFHISAFKPFRGPVPEEVYPLPTETMGIHPLLVLAAVCAVRTILRQGKEVQ 666
Query: 336 ------TAS-----------------PTIHLEDKVNFDGGESVMIYAI*EEYKVGLGIMD 226
TAS P HLEDKV+F G + AI + V
Sbjct: 667 QILVQWTASDPENATWEDFVAFCRLYPDYHLEDKVDFHGVGNDTFVAIPLQQHV-----Q 721
Query: 225 SNEKEVMESPS 193
+ E V+E P+
Sbjct: 722 TTEASVVEEPN 732
>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
Length = 1593
Score = 83.2 bits (204), Expect = 4e-13
Identities = 69/239 (28%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQ+D +L+ + H KPR W++ W + S MTPF LYG
Sbjct: 1075 YHPQSDGQTEVVNRCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYG 1134
Query: 726 RRPPNLPLYI-----------QRPANNQAVAEVQLHEE---------------------- 646
R PP +P Y Q A N+ + E++ H
Sbjct: 1135 RPPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVG 1194
Query: 645 DQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
D RLQP++Q SVF + + KL+ R+Y P + ++G VA +L+L S +H H S
Sbjct: 1195 DWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYEIEERIGPVAYKLKLSPGSRIHPVFHVSL 1254
Query: 465 LKFVKCAVGAKSCTLPPESHNSNTRVVMLSICSTRDVLSTERVTASPTIHLEDKVNFDG 289
LK V + LPP + R+ R VLST V T E V ++G
Sbjct: 1255 LKKKIGEVAIANDELPPLTEEGVIRL------QPRKVLSTRWVNKGSTSASESLVLWEG 1307
>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
Length = 647
Score = 80.5 bits (197), Expect = 2e-12
Identities = 64/215 (29%), Positives = 88/215 (40%), Gaps = 43/215 (20%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQTD +L+ H +PR W + SW D S M+PF LYG
Sbjct: 363 YHPQTDGQTEVINRCVEQYLRCLVHQQPRKWYSLLSWADFWYNIAYHASTSMSPFQALYG 422
Query: 726 RRPPNLPLY------IQRPANNQAVAEVQLHEEDQALH---------------------- 631
R PP +P Y + N A + LH+ LH
Sbjct: 423 RPPPMIPHYQLGSSLVNEVNQNLASRDDLLHQLKLNLHQASNRMKQIADSKRRDIEFNEG 482
Query: 630 -----RLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
RL P++Q +VF +A+ KLA RFY P + ++G VA +L+L + S +H H S
Sbjct: 483 DLVFLRLHPYRQQTVFKRASQKLAHRFYEPFPIEKRIGKVAYQLQLPAGSRIHPVFHVSL 542
Query: 465 LKFVKCAVGAKSCTLPPESHNSNTRVVMLSICSTR 361
LK A TLPP + + + I TR
Sbjct: 543 LKKTIGDSNACCPTLPPLTDDGAFIIEPTEIIDTR 577
>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
retrotransposon protein [Glycine max]
Length = 1261
Score = 78.2 bits (191), Expect = 1e-11
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Frame = -1
Query: 852 HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYGRRPPNLPLYIQRPAN--- 682
+L+A+ H KP +W + W S MTPF +GR+PP+ P Y+ A
Sbjct: 1061 YLRAFIHHKPNSWGRFLLWAKWSYNTSVHSSTGMTPFEVTFGRKPPSFPQYLTGTAKAIF 1120
Query: 681 ---NQAVAEVQLHEE---------------DQALHRLQPFKQISVFGQATPKLAQRFYRP 556
Q + + Q H + + L +L+P++Q + G LA+RFY P
Sbjct: 1121 TLLRQKLLKAQTHMKAIADGHRRDHEFQVGEWVLVKLRPYRQSTASGAVHSMLARRFYGP 1180
Query: 555 CIVIIQVGLVAARLELLSTSWMHSGLHNSTLK-FVKCAVGAKSCTLPPESHNSNTRVVML 379
+ ++G VA +L L TS +H H S LK FV AK LPP + ++ + L
Sbjct: 1181 FRITERMGPVAYKLALPETSRIHPMFHCSNLKPFVGTPASAKMEELPPLAVDNQPVLTPL 1240
Query: 378 SICSTRDVLS 349
+I + + + S
Sbjct: 1241 AILAHKTIPS 1250
>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 77.8 bits (190), Expect = 1e-11
Identities = 60/203 (29%), Positives = 84/203 (41%), Gaps = 43/203 (21%)
Frame = -1
Query: 939 QELGHVTFHHLRVLASRHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVD 790
QEL ++ L++ +S Y PQTD +L+ Y H PR W + W +
Sbjct: 1084 QELFKLSGTQLKMSSS-----YHPQTDGQSEVVNRCVEQYLRCYAHHHPRKWSFFLPWAE 1138
Query: 789 XXXXXXXXXSIRMTPFHTLYGRRPPNLPLYI----------QRPANNQAV---------- 670
S MTPF LYGR PP +P Y+ Q A+ A+
Sbjct: 1139 FWYNTTYHASTGMTPFQALYGRLPPTIPHYLMGTTPIHAVDQNLASRNAILRQLKTNLHA 1198
Query: 669 -------------AEVQLHEEDQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGL 529
++ D +LQP++Q SVF A+ KLA RFY P + ++G
Sbjct: 1199 ATNRMKQVADSKRRNIEYQVGDMVFLKLQPYRQQSVFCXASQKLASRFYGPYQIEQRIGK 1258
Query: 528 VAARLELLSTSWMHSGLHNSTLK 460
VA +L L S +H H S LK
Sbjct: 1259 VAYKLNLPEGSKIHPIFHVSLLK 1281
>emb|CAN79864.1| hypothetical protein VITISV_038293 [Vitis vinifera]
Length = 1110
Score = 74.3 bits (181), Expect = 2e-10
Identities = 54/157 (34%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQT+ +L Y H +PR + W + SI MTPF LYG
Sbjct: 259 YHPQTNGQSEVVNRCVEQYLCCYAHHQPRKRSFFLPWAEFWYNTTYHASIGMTPFQALYG 318
Query: 726 RRPPNLPLYIQRPANNQAVAEVQLHEEDQALHRLQP--------FKQISVFGQATPKLAQ 571
R PPN+P Y+ AV + L D L +L+ KQ++ QA+ KLA
Sbjct: 319 RLPPNIPHYLMGTIPVHAV-DQNLAFRDAILRQLKTNLHAATNRMKQVADSKQASQKLAS 377
Query: 570 RFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLK 460
RFY P + ++G VA +L LL S +H H S LK
Sbjct: 378 RFYGPYQIEQRIGKVAYKLNLLEGSKIHPIFHVSLLK 414
>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
Length = 1259
Score = 73.6 bits (179), Expect = 3e-10
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 43/197 (21%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQ+D +L+ + H KPR W++ W + S MTPF LYG
Sbjct: 1046 YHPQSDGQTEVVNRCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYG 1105
Query: 726 RRPPNLPLY-----------IQRPANNQAVAEVQLHEE---------------------- 646
PP +P Y Q A ++ + E++ H
Sbjct: 1106 XPPPAIPSYEIGSCPIEELDDQMTARDELLQELKAHLHAANNRMKQAADKKRREVNFEVG 1165
Query: 645 DQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
D RLQP++Q SVF + + KL+ R+Y P + ++G VA +L+L S +H H S
Sbjct: 1166 DWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYQIEERIGPVAYKLKLSPGSRIHPVFHVSL 1225
Query: 465 LKFVKCAVGAKSCTLPP 415
LK V + LPP
Sbjct: 1226 LKKKIGEVAIANDELPP 1242
>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 73.2 bits (178), Expect = 4e-10
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 44/204 (21%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
+H Y+PQTD +L+ +T PR W Y +WV+ +++ +PF
Sbjct: 935 KHSTSYRPQTDGQTEVLNRCLETYLRCFTSSHPRAWHKYLAWVEFSFNTAYHSALKTSPF 994
Query: 741 HTLYGRRPPNLPLYIQRPANNQAVAEVQLHEEDQALH----------------------- 631
+YGR PP+L + +N + EVQL E D L
Sbjct: 995 KVVYGRDPPSLVRFELGSTDNWDL-EVQLKERDLMLEHIRANLQRAQEIMKRNADMKRRD 1053
Query: 630 -----------RLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHS 484
+LQP++Q +V + KLA +F+ P ++ ++G VA R+ L ++S +H+
Sbjct: 1054 VVFAVGDWVHLKLQPYRQRTVVRRPCYKLAAKFFGPFEIVERIGNVAYRINLPASSKIHN 1113
Query: 483 GLHNSTLKFVKCAVGAKSCTLPPE 412
+ S LK V T PP+
Sbjct: 1114 VFNVSQLKKVFGEQQVVQATNPPK 1137
>gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 945
Score = 70.5 bits (171), Expect = 2e-09
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 43/182 (23%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQTD L+ + H P+ W ++ W + S MTPF LYG
Sbjct: 682 YHPQTDGQTEVVNRCIEQFLRCFVHYHPKQWSSFIPWAEYWYNTTFHASTGMTPFQALYG 741
Query: 726 RRPPNLPLYI-----------QRPANNQAVAEVQLH----------------------EE 646
R P +P Y Q A ++ +AE++ H
Sbjct: 742 RPPSPIPAYELGSVVCGELNEQMAARDELLAELKQHLVTANNCMKQQADSRLRDVSFQVG 801
Query: 645 DQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
D L R+QP++Q ++F +++ KL+ RFY P V + G VA RL L + +H H S
Sbjct: 802 DWVLLRIQPYRQKTLFRRSSQKLSHRFYGPFQVASKHGEVAYRLTLPEGTRIHPVFHVSL 861
Query: 465 LK 460
LK
Sbjct: 862 LK 863
>emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
Length = 921
Score = 68.9 bits (167), Expect = 7e-09
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Frame = -1
Query: 921 TFHHLRVLASRHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXX 772
T L+ R Y PQTD +L+ + +PR W + W +
Sbjct: 700 TLFQLQGTKLRMSSSYHPQTDGQTEVVNRTLEQNLRCFAGDQPRKWLEWIPWAEFSYNTF 759
Query: 771 XXXSIRMTPFHTLYGRRPPNLPLYIQRPANNQAVAEVQLHEEDQALHRLQPFKQISVFGQ 592
+MTPF +YG PP++ Y+ ++ QAV E L + D L LQP++Q SV +
Sbjct: 760 IHSXTKMTPFEAVYGIPPPSILTYVLGTSHIQAVDE-YLRDRDTIL-SLQPYRQTSVAFR 817
Query: 591 ATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTL 463
A+ KLA F+ P +++ +V VA L L + +H+ H S L
Sbjct: 818 ASMKLAPXFFGPYLIMGKVDPVAYWLALPPGTQIHNVFHVSML 860
>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
Length = 623
Score = 68.6 bits (166), Expect = 9e-09
Identities = 59/205 (28%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Frame = -1
Query: 876 YQPQTDAHHLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYGRRPPNLPLYI 697
Y PQTD +K +PR W + W + S M+PF LYGR PP +P Y
Sbjct: 355 YHPQTDGQ-IK-----QPRKWYSLIPWAEFWYNTAYHASTDMSPFQALYGRPPPMIPHYQ 408
Query: 696 --QRPAN--NQAVA-----------------------------EVQLHEEDQALHRLQPF 616
P N +Q +A +++ +E D RL P
Sbjct: 409 LGSSPVNEVDQNLASRDDLLHQLKLNLHQASNRMKQIADSKRRDIEFNEXDLVFLRLHPX 468
Query: 615 KQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLKFVKCAVGA 436
+Q +VF +A+ KL RFY P + ++G VA +L+L + S +H H LK A
Sbjct: 469 RQQTVFKRASQKLXHRFYGPFPIEKRIGKVAYQLQLPAGSXIHPVFHVXLLKKTIGDSNA 528
Query: 435 KSCTLPPESHNSNTRVVMLSICSTR 361
+ TLPP + + + I TR
Sbjct: 529 RCPTLPPLTDDGALIIEPXEIIDTR 553
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 67.4 bits (163), Expect = 2e-08
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Frame = -1
Query: 882 VVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTL 733
+ Y P+TD +L+ + +P+ W ++ W + + TPF +
Sbjct: 1025 IAYHPETDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTSYHAATGHTPFEMV 1084
Query: 732 YGRRPPNLPLYIQRPANNQAVAEVQLHEEDQALHRLQP--------FKQISVFGQATPKL 577
YGR PP + ++Q +AV +L + D+AL +L+ KQI+ + KL
Sbjct: 1085 YGRPPPVITRWVQGETRVEAVQR-ELLDRDEALKQLREQLLRAQVRMKQIADKKRIHAKL 1143
Query: 576 AQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLK 460
A R++RP V +VG VA +L+L S +HS H S LK
Sbjct: 1144 AARYHRPYPVEARVGAVAYKLKLPEGSRVHSVFHVSLLK 1182
>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
Length = 790
Score = 67.0 bits (162), Expect = 3e-08
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Frame = -1
Query: 867 QTDAHHLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYGRRPPNLPLYIQRP 688
+T +L+ + +P+ W + W + S +MTPF +YG PP L Y+
Sbjct: 563 RTLEQYLRCFVGDQPQKWLKWIPWAEFSYNTSTHSSTKMTPFEAVYGIPPPRLLAYVPGT 622
Query: 687 ANNQAVAEVQLHEEDQALHRL-------------QPFKQISVFGQATPKLAQRFYRPCIV 547
++ QAV E L + D L L QP++Q S +++ KLA F+ P V
Sbjct: 623 SHVQAVDEY-LRDRDAILRELRXNLLLAQDRMKFQPYRQTSXAFRSSMKLAPXFFXPYKV 681
Query: 546 IIQVGLVAARLELLSTSWMHSGLHNSTLKFVKCAVGAKSCTLPPESHNS 400
I +VG A +L L S +H H S LK V A S LP S S
Sbjct: 682 IXKVGPXAYKLALPLGSQIHDVFHVSLLKKHLGPVTATSTQLPLVSDTS 730
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 67.0 bits (162), Expect = 3e-08
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 43/182 (23%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQTD +L+ + +P +W + W + + + TPF +YG
Sbjct: 1361 YHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYG 1420
Query: 726 RRPPNLPLYIQRPANNQAVAE---------VQLHE------------------------E 646
R PP L Y P NN V E V+L E +
Sbjct: 1421 REPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEID 1480
Query: 645 DQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
+ +L+P++Q SV + KL+QR++ P V+ ++G VA +L+L S +H H S
Sbjct: 1481 EWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQ 1540
Query: 465 LK 460
LK
Sbjct: 1541 LK 1542
>gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japonica Group]
Length = 303
Score = 66.2 bits (160), Expect = 4e-08
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
R Y PQTD +L+ T +P+ W ++ + + S++MTPF
Sbjct: 91 RFSTAYHPQTDGQTKRVNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSLQMTPF 150
Query: 741 HTLYGRRPPNLPLYIQRPANNQAVAEVQLHEEDQALHRLQPFKQISVFG-QATPKLAQRF 565
LYG PP + + P N A A RLQP++Q +VFG + + KL +F
Sbjct: 151 QALYGYPPPRINEF-SLPCNVSAEA------------RLQPYRQ-TVFGIRGSLKLRSKF 196
Query: 564 YRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLKFVKCAVGAKSCTLPPESHNSNTRVV 385
Y P VI +VG VA RL+L + + +H H S LK LP +
Sbjct: 197 YGPFKVIEKVGQVAYRLQLPNDATIHPVFHVSQLKKHLGKRAIPMPNLPSLLTEGKGKKP 256
Query: 384 MLSICSTRDVLSTERVTASPTIHLEDKVNFD 292
+ + + + S+E T + +D N+D
Sbjct: 257 LQTKSDSEEETSSESETEEQYMETDDDDNYD 287
>gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708833|gb|ABF96628.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 627
Score = 66.2 bits (160), Expect = 4e-08
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
R Y PQTD +L+ T +P+ W ++ + + S++MTPF
Sbjct: 91 RFSTAYHPQTDGQTKRVNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSLQMTPF 150
Query: 741 HTLYGRRPPNLPLYIQRPANNQAVAEVQLHEEDQALHRLQPFKQISVFG-QATPKLAQRF 565
LYG PP + + P N A A RLQP++Q +VFG + + KL +F
Sbjct: 151 QALYGYPPPRINEF-SLPCNVSAEA------------RLQPYRQ-TVFGIRGSLKLRSKF 196
Query: 564 YRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLKFVKCAVGAKSCTLPPESHNSNTRVV 385
Y P VI +VG VA RL+L + + +H H S LK LP +
Sbjct: 197 YGPFKVIEKVGQVAYRLQLPNDATIHPVFHVSQLKKHLGKRAIPMPNLPSLLTEGKGKKP 256
Query: 384 MLSICSTRDVLSTERVTASPTIHLEDKVNFD 292
+ + + + S+E T + +D N+D
Sbjct: 257 LQTKSDSEEETSSESETEEQYMETDDDDNYD 287
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 65.9 bits (159), Expect = 6e-08
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
R Y PQTD +L+ T +P W ++ S S++MTPF
Sbjct: 1285 RFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPF 1344
Query: 741 HTLYGRRPPNLPLY-IQRPANNQAVAEVQLHEEDQALHRLQPFKQISVFGQATPKLAQRF 565
LYG PP + + I + +A E L+ D +LQP++Q + + + KL +F
Sbjct: 1345 QALYGYPPPQINEFSISCNVSAEARTERSLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKF 1404
Query: 564 YRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLK 460
Y P V+ ++G VA +L+L + +H H S LK
Sbjct: 1405 YGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLK 1439
>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2726
Score = 65.9 bits (159), Expect = 6e-08
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 44/188 (23%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
++ + PQTD +L+ + PRTW + SW + +++ TPF
Sbjct: 2431 KYSTAFHPQTDGQTEVLNRCMETYLRCFASSHPRTWHKFLSWAELWYNTSFHTALKATPF 2490
Query: 741 HTLYGRRPPNLPLYIQRPANNQAVAEVQLHEEDQAL--------------------HR-- 628
+YGR PP + + + NN + E+ L E D L HR
Sbjct: 2491 QVVYGREPPAIVRFEEGSTNNYDL-EMALRERDAMLVQIQQHLLRAQHLMKASADKHRRE 2549
Query: 627 ------------LQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHS 484
L+PF+Q +V + KLA +++ P + ++G VA RL+L + +H
Sbjct: 2550 LSFAVGDWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISERIGKVAYRLKLPDEARIHP 2609
Query: 483 GLHNSTLK 460
H S LK
Sbjct: 2610 VFHISQLK 2617
>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
Length = 1369
Score = 65.9 bits (159), Expect = 6e-08
Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 66/266 (24%)
Frame = -1
Query: 876 YQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPFHTLYG 727
Y PQTD +L+ T KP+ W + SW + +I+ TPF LYG
Sbjct: 1077 YHPQTDGQTEVVNRCVETYLRCVTGSKPKQWPKWLSWAEFWYNTNYHSAIKTTPFKALYG 1136
Query: 726 RRPP---------------------------NLPLYIQRPAN------NQAVAEVQLHEE 646
R PP L +++ N N+ +VQ
Sbjct: 1137 REPPVIFKGNDSLTSVDEVEKLTAERNLILEELKSNLEKAQNRMRQQANKHRRDVQYEVG 1196
Query: 645 DQALHRLQPFKQISVFGQATPKLAQRFYRPCIVIIQVGLVAARLELLSTSWMHSGLHNST 466
D ++QP+K S+ ++ KL+ R+Y P +I ++ A +L+L S +H H S
Sbjct: 1197 DLVYLKIQPYKLKSLAKRSNQKLSPRYYGPYPIIAKINPAAYKLQLPEGSQVHPVFHISL 1256
Query: 465 LKFVKCAVGAKSCTLPPE-SHNSNTRVVMLSICSTR-------DVL-------------- 352
LK + A G +S LP + +V +I TR +VL
Sbjct: 1257 LKKAENA-GVQSQPLPAALTEEWELKVEPEAIMDTRENRDGDLEVLIRWKDLPTFEDSWE 1315
Query: 351 -STERVTASPTIHLEDKVNFDGGESV 277
++ + P LEDK+N GG V
Sbjct: 1316 DFSKLLDQFPNHQLEDKLNLQGGRDV 1341
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 65.9 bits (159), Expect = 6e-08
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Frame = -1
Query: 891 RHEVVYQPQTDAH----------HLKAYTHLKPRTWDAYWSWVDXXXXXXXXXSIRMTPF 742
R Y PQTD +L+ T +P W ++ S S++MTPF
Sbjct: 1183 RFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPF 1242
Query: 741 HTLYGRRPPNLPLY-IQRPANNQAVAEVQLHEEDQALHRLQPFKQISVFGQATPKLAQRF 565
LYG PP + + I + +A E L+ D +LQP++Q + + + KL +F
Sbjct: 1243 QALYGYPPPQINEFSISCNVSAEARTERSLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKF 1302
Query: 564 YRPCIVIIQVGLVAARLELLSTSWMHSGLHNSTLK 460
Y P V+ ++G VA +L+L + +H H S LK
Sbjct: 1303 YGPFKVLEKIGQVAYKLQLPEDASIHPVFHVSQLK 1337