BLASTX nr result
ID: Mentha22_contig00052459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha22_contig00052459 (382 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_734017.2| RNA-dependent RNA polymerase [Cycas necrotic st... 87 2e-15 ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus] gi|5... 87 2e-15 gb|AEN25475.1| polyprotein 1, partial [Cycas necrotic stunt virus] 83 4e-14 >ref|NP_734017.2| RNA-dependent RNA polymerase [Cycas necrotic stunt virus] Length = 846 Score = 87.4 bits (215), Expect = 2e-15 Identities = 39/43 (90%), Positives = 42/43 (97%) Frame = -1 Query: 382 ATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDWRKNKFLGIS 254 ATSS+S+ KAFSQCWAMRCAPNSSSRKVTFEP+WRKNKFLGIS Sbjct: 804 ATSSDSIAKAFSQCWAMRCAPNSSSRKVTFEPEWRKNKFLGIS 846 >ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus] gi|50400776|sp|Q8QVV0.1|POL1_CNSV RecName: Full=RNA1 polyprotein; AltName: Full=P1; Contains: RecName: Full=P1A protein; Short=1A; AltName: Full=Protease cofactor; Contains: RecName: Full=Putative ATP-dependent helicase; AltName: Full=1B; AltName: Full=Membrane-binding protein; AltName: Full=NTP-binding protein; Short=NTB; Contains: RecName: Full=Viral genome-linked protein; AltName: Full=1C-VPg; Contains: RecName: Full=Picornain 3C-like protease; Short=3C-like protease; AltName: Full=1D-PRO; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=1E-POL gi|20160382|dbj|BAB89369.1| polyprotien 1 [Cycas necrotic stunt virus] Length = 2336 Score = 87.4 bits (215), Expect = 2e-15 Identities = 39/43 (90%), Positives = 42/43 (97%) Frame = -1 Query: 382 ATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDWRKNKFLGIS 254 ATSS+S+ KAFSQCWAMRCAPNSSSRKVTFEP+WRKNKFLGIS Sbjct: 2294 ATSSDSIAKAFSQCWAMRCAPNSSSRKVTFEPEWRKNKFLGIS 2336 >gb|AEN25475.1| polyprotein 1, partial [Cycas necrotic stunt virus] Length = 1984 Score = 83.2 bits (204), Expect = 4e-14 Identities = 36/43 (83%), Positives = 41/43 (95%) Frame = -1 Query: 382 ATSSNSVEKAFSQCWAMRCAPNSSSRKVTFEPDWRKNKFLGIS 254 ATSS+++ KAFSQCWAMRCAPNSSSRK+TFEP+WRKNK LGIS Sbjct: 1942 ATSSDTIAKAFSQCWAMRCAPNSSSRKITFEPEWRKNKVLGIS 1984