BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00052457
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group] gi...    57   3e-06
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]         57   3e-06
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...    56   6e-06
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...    56   6e-06

>emb|CAE04927.2| OSJNBa0017P10.4 [Oryza sativa Japonica Group]
           gi|38345441|emb|CAE03293.2| OSJNBb0046P18.9 [Oryza
           sativa Japonica Group]
          Length = 1134

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/124 (28%), Positives = 59/124 (47%)
 Frame = -3

Query: 376 DFDSVEAMIHYASIVERQLRDGRRRSFQSTPVRSSWNQGYSSTPRIAPTRPPNQSTQPVH 197
           D+ ++  + H A   ER+++ GRR S      +++++ G +S+ +   T P  ++  P  
Sbjct: 481 DYTNMTRLFHLACKAEREVQ-GRRAS-----AKANFSAGKTSSWQTRTTPPAGRTASPS- 533

Query: 196 RSE*SAPPGIRRSDSMXXXXXXXXXXXXXXXXXXQDTPGRARDVQCHKCKGWGHFQVQCP 17
               S P   R +  +                    + GR RDVQCH+CKG+GH Q  CP
Sbjct: 534 ----STPTTSRAAPPLSSDKSVTKAAQPAPSASSMASTGRTRDVQCHRCKGFGHVQRDCP 589

Query: 16  NRRV 5
           ++RV
Sbjct: 590 SKRV 593


>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
          Length = 1431

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/124 (29%), Positives = 59/124 (47%)
 Frame = -3

Query: 376 DFDSVEAMIHYASIVERQLRDGRRRSFQSTPVRSSWNQGYSSTPRIAPTRPPNQSTQPVH 197
           D+ ++  + H A   ER+++ GRR S      +++++ G +S+ +   T P  ++T P  
Sbjct: 298 DYTNMTRLFHLACKAEREVQ-GRRAS-----AKANFSAGKTSSWQTRTTPPAGRTTSPS- 350

Query: 196 RSE*SAPPGIRRSDSMXXXXXXXXXXXXXXXXXXQDTPGRARDVQCHKCKGWGHFQVQCP 17
               S P   R +                       + GR RDVQCH+CKG+GH Q  CP
Sbjct: 351 ----STPTTSRAAPPPSGDKSAIKAAQPAPSASSMASTGRMRDVQCHRCKGFGHVQRDCP 406

Query: 16  NRRV 5
           ++RV
Sbjct: 407 SKRV 410


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
 Frame = -3

Query: 376 DFDSVEAMIHYASIVERQLRDGRRRSFQ---STPVRSSWNQ----------GYSSTPRIA 236
           D+ ++  + H A   ER+++ GRR S +   S    SSW              SSTP  +
Sbjct: 656 DYTNMTRLFHLACKAEREVQ-GRRASAKANFSAGKTSSWQTRTTPPAGRTASPSSTPTTS 714

Query: 235 PTRPPNQSTQPVHRSE*SAPPGIRRSDSMXXXXXXXXXXXXXXXXXXQDTPGRARDVQCH 56
              PP  S + V ++   AP     + SM                    + GR RDVQCH
Sbjct: 715 RAAPPPSSDKSVTKAAQPAPS----ASSMV-------------------STGRMRDVQCH 751

Query: 55  KCKGWGHFQVQCPNRRV 5
           +CKG+GH Q  CP++RV
Sbjct: 752 RCKGFGHVQRDCPSKRV 768


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
 Frame = -3

Query: 376  DFDSVEAMIHYASIVERQLRDGRRRSFQ---STPVRSSWNQ----------GYSSTPRIA 236
            D+ ++  + H A   ER+++ GRR S +   S    SSW              SSTP  +
Sbjct: 665  DYTNMTRLFHLACKAEREVQ-GRRASAKANFSAGKTSSWQTRTTPPAGRTASPSSTPTTS 723

Query: 235  PTRPPNQSTQPVHRSE*SAPPGIRRSDSMXXXXXXXXXXXXXXXXXXQDTPGRARDVQCH 56
               PP  S + V ++   AP     + SM                    + GR RDVQCH
Sbjct: 724  RAAPPPSSDKSVTKAAQPAPS----ASSMV-------------------STGRMRDVQCH 760

Query: 55   KCKGWGHFQVQCPNRRV 5
            +CKG+GH Q  CP++RV
Sbjct: 761  RCKGFGHVQRDCPSKRV 777