BLASTX nr result

ID: Mentha22_contig00052456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00052456
         (518 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366022.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   4e-06
ref|XP_004247686.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   4e-06
ref|XP_004248472.1| PREDICTED: F-box protein CPR30-like [Solanum...    55   1e-05

>ref|XP_006366022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 335

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
 Frame = -1

Query: 497 VKLGFGWDKHSDAYKV--FLGVPDHENDEGGRVARIYSSGTNSWRAVE-HGSASLIGKFG 327
           ++ GFG+D   + YKV      P H       +  +YS    SW+ +E   S SL GK G
Sbjct: 160 IRYGFGYDASFEDYKVVKIFSFP-HIEGRYENMVNVYSLKAKSWKMIEGFNSGSLNGKVG 218

Query: 326 VFARGRIYWLTKSGH-------IEYLDLRNDVFGKTMIDPSCKFKFGDDVCVW-LWESRG 171
           VF  G ++W     H       I  LDL  + +GK  + PS    + D    W L  SRG
Sbjct: 219 VFVNGALHWEASHSHCSGSFWEIVTLDLAVERYGKIAL-PS----YEDGGVYWTLGVSRG 273

Query: 170 RLCFVCDTKDGAKRSVWVMKK 108
            L   C+ +   K  VWVMK+
Sbjct: 274 YLVGCCNYEKN-KADVWVMKE 293


>ref|XP_004247686.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           lycopersicum]
          Length = 444

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
 Frame = -1

Query: 500 KVKLGFGWDKHSDAYKVFLGVPDHENDEGGRV-ARIYSSGTNSWRAVEHGSASLIGKFGV 324
           K   GFG+D+  D YKV    P ++  +  RV   IYS  +NSWR +   +   +   G 
Sbjct: 225 KCNFGFGYDELKDDYKVVGIFPVYKRMQLCRVEVHIYSLRSNSWRRINDSALDFLHVSGK 284

Query: 323 FARGRIYWLTKSGHIEYLDLRNDVFGKTMIDPSCKFK-FGDDVCVWLWESRGRLCFVCDT 147
               ++YWL   G+I  +DL N+ +  T I+    FK +G  V   L      L  +C+ 
Sbjct: 285 LVNRKLYWLQTCGNISSIDLGNEKW--TEIEKPSNFKEYGHFVLGVLGSD---LSVLCNY 339

Query: 146 KDGAKRSVWVMKK 108
           K+     VW+MK+
Sbjct: 340 KN-CHADVWIMKE 351


>ref|XP_004248472.1| PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
          Length = 293

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
 Frame = -1

Query: 497 VKLGFGWDKHSDAYKV--FLGVPDHENDEGGRVARIYSSGTNSWRAVE-HGSASLIGKFG 327
           ++ GFG+D   + YKV      P H       +  +YS    SW+ +E   S+SL GK G
Sbjct: 134 IRYGFGYDASFEDYKVVKIFSFP-HIEGRFENMVSVYSLKAKSWKMIEGFNSSSLNGKVG 192

Query: 326 VFARGRIYWLTKSGH-------IEYLDLRNDVFGKTMIDPSCKFKFGDDVCVW-LWESRG 171
           VF  G ++W     H       I  LDL  + +GK  + PS    + D    W L  SRG
Sbjct: 193 VFVNGALHWEACHSHCSGLFWEIVILDLAVERYGKIAL-PS----YEDGGVYWTLSVSRG 247

Query: 170 RLCFVCDTKDGAKRSVWVMKK 108
            L   C+ +   K  VWVMK+
Sbjct: 248 YLVGCCNYEKN-KADVWVMKE 267


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