BLASTX nr result
ID: Mentha22_contig00052156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00052156
(406 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABM55238.1| integrase [Beta vulgaris] 74 6e-21
gb|ABH08430.1| putative integrase [Beta vulgaris] 74 6e-21
gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis D... 65 7e-20
gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana] 69 8e-20
gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus] 65 9e-20
gb|ABF95048.1| retrotransposon protein, putative, unclassified [... 64 1e-19
ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309... 69 2e-19
gb|ABF98474.1| retrotransposon protein, putative, Ty1-copia subc... 65 3e-19
gb|AAP53350.2| retrotransposon protein, putative, Ty1-copia subc... 65 3e-19
gb|AAN08664.1| putative gag-pol polyprotein [Oryza sativa Japoni... 65 3e-19
emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera] 67 4e-19
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera] 66 4e-19
gb|ABF95221.1| retrotransposon protein, putative, unclassified [... 62 5e-19
gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis] 60 5e-19
ref|XP_004509513.1| PREDICTED: uncharacterized protein LOC101489... 70 5e-19
gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subc... 64 7e-19
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays] 62 7e-19
gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group] 64 7e-19
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group] 64 7e-19
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 62 7e-19
>gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 73.6 bits (179), Expect(2) = 6e-21
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 270 DPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
D +KYRG+IG LLYLT SRPDIAF+VG+CARFQ PKE+H+ AVK
Sbjct: 1294 DQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQANPKESHLTAVK 1338
Score = 52.8 bits (125), Expect(2) = 6e-21
Identities = 23/78 (29%), Positives = 47/78 (60%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
+ LC +F L++++ LGLQ+KQ+ +GI ++Q KY K+ + KYG+++S+
Sbjct: 1214 ETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKYIKELLKKYGLENSKI 1273
Query: 211 VKIPINTN*KIEPGTEGS 264
P+ T+ +++ + G+
Sbjct: 1274 NHTPMGTSTRLDEDSIGT 1291
>gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 73.6 bits (179), Expect(2) = 6e-21
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 270 DPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
D +KYRG+IG LLYLT SRPDIAF+VG+CARFQ PKE+H+ AVK
Sbjct: 1294 DQTKYRGMIGLLLYLTASRPDIAFSVGLCARFQANPKESHLTAVK 1338
Score = 52.8 bits (125), Expect(2) = 6e-21
Identities = 23/78 (29%), Positives = 47/78 (60%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
+ LC +F L++++ LGLQ+KQ+ +GI ++Q KY K+ + KYG+++S+
Sbjct: 1214 ETLCKEFSRLVSNEFEMSMMGELNFFLGLQIKQTEKGIIVHQQKYIKELLKKYGLENSKI 1273
Query: 211 VKIPINTN*KIEPGTEGS 264
P+ T+ +++ + G+
Sbjct: 1274 NHTPMGTSTRLDEDSIGT 1291
>gb|EXX76353.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 514
Score = 65.1 bits (157), Expect(2) = 7e-20
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D KYRG+IGSLLYLT SRPDI F+ VCAR+Q P E+H AVK
Sbjct: 285 KPVDQKKYRGMIGSLLYLTASRPDIMFSTCVCARYQANPMESHAIAVK 332
Score = 57.8 bits (138), Expect(2) = 7e-20
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 46 KFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKIPI 225
KF DLM S+ LGLQVKQS++GI+INQ Y K+ +T++ + S T K P+
Sbjct: 213 KFADLMKSKFEMSMIGEMTTFLGLQVKQSSDGIFINQENYVKNLLTRFSLDKSNTAKTPM 272
Query: 226 NTN*KIEPGTEG 261
K++ G
Sbjct: 273 ALGYKLDADLNG 284
>gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
Length = 1463
Score = 68.9 bits (167), Expect(2) = 8e-20
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +3
Query: 270 DPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
D YRG+IGSLLYLT SRPD+ F+VGVCAR+Q PK++H+ A+K
Sbjct: 1251 DEKMYRGMIGSLLYLTASRPDLCFSVGVCARYQANPKQSHLNAMK 1295
Score = 53.5 bits (127), Expect(2) = 8e-20
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +1
Query: 28 KDILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSR 207
K L + FV+ MT + LGLQ+KQ+ EG++I+QS Y + I ++G+Q+++
Sbjct: 1170 KQKLVSDFVESMTKEFEMSMVGEMNHFLGLQIKQTDEGVHISQSMYAQGLIQRFGMQTAK 1229
Query: 208 TVKIPINTN*KIEPGTEG 261
T K P++ K+ G
Sbjct: 1230 TSKTPMSATAKLSADEAG 1247
>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
Length = 349
Score = 64.7 bits (156), Expect(2) = 9e-20
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K + + YRG+IGSLLYLT SRPDI F+ +CAR+Q PKE+H+ AVK
Sbjct: 174 KSVNVTSYRGMIGSLLYLTASRPDIMFSTCLCARYQANPKESHLAAVK 221
Score = 57.8 bits (138), Expect(2) = 9e-20
Identities = 30/78 (38%), Positives = 42/78 (53%)
Frame = +1
Query: 28 KDILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSR 207
K+ +C KF LM S+ LGLQVKQS +GI+INQSKY KD + K+
Sbjct: 96 KESMCRKFSKLMQSKYETSLMGELTFFLGLQVKQSDKGIFINQSKYVKDLLKKFDFNECS 155
Query: 208 TVKIPINTN*KIEPGTEG 261
++K P+ K+ +G
Sbjct: 156 SMKTPMAPPLKLNADPDG 173
>gb|ABF95048.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1450
Score = 63.5 bits (153), Expect(2) = 1e-19
Identities = 31/48 (64%), Positives = 34/48 (70%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR IIGSLLYL SRPDI +V +CARFQ EPKE H+ AVK
Sbjct: 1343 KCVDQKVYRSIIGSLLYLCASRPDIMLSVCMCARFQAEPKECHLIAVK 1390
Score = 58.5 bits (140), Expect(2) = 1e-19
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 40 CNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKI 219
C +F +MT + LGLQVKQ+ EG +I+Q+KY KD + K+G++ ++ +K
Sbjct: 1269 CEEFSSIMTKRFEMSMMGELTFFLGLQVKQAQEGTFISQTKYVKDIVKKFGMEDAKPIKT 1328
Query: 220 PINTN 234
P+ TN
Sbjct: 1329 PMPTN 1333
>ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309698 [Fragaria vesca
subsp. vesca]
Length = 1541
Score = 68.9 bits (167), Expect(2) = 2e-19
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 270 DPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
D + YR +IGSL+YLT SRPDIA++VGVCAR+Q PK++H++AVK
Sbjct: 1319 DQTNYRSMIGSLMYLTASRPDIAYSVGVCARYQANPKQSHVKAVK 1363
Score = 52.0 bits (123), Expect(2) = 2e-19
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 37 LCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVK 216
L N+F +LM + LGLQV Q+ G++I QSKY +D + K+G++++
Sbjct: 1241 LVNEFTELMKKEFEMSLCGKLSYFLGLQVMQNQNGLFICQSKYAQDLVKKFGMETATAFP 1300
Query: 217 IPINTN*KIEPGTEG 261
P++T+ KI G
Sbjct: 1301 TPMSTSCKISADMSG 1315
>gb|ABF98474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1753
Score = 64.7 bits (156), Expect(2) = 3e-19
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
KL D YR +IGSLLYLT SRPDI F++ +CARFQ PKE H+ AVK
Sbjct: 1279 KLVDLKLYRFMIGSLLYLTASRPDIMFSICMCARFQAAPKECHLVAVK 1326
Score = 55.8 bits (133), Expect(2) = 3e-19
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+M+ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 1202 EVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 1261
Query: 211 VKIPINTN 234
+K P+ TN
Sbjct: 1262 IKTPMATN 1269
>gb|AAP53350.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1029
Score = 65.5 bits (158), Expect(2) = 3e-19
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
KL D YR +IGSLLYLT SRPDI F+V +CARFQ PKE H+ AVK
Sbjct: 430 KLVDLKLYRSMIGSLLYLTTSRPDIMFSVCMCARFQAAPKECHLVAVK 477
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 22/77 (28%), Positives = 45/77 (58%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+++ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 353 EVFCKEFGDMISREFDMSLIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 412
Query: 211 VKIPINTN*KIEPGTEG 261
+K P+ TN + EG
Sbjct: 413 IKTPMATNGHLALDEEG 429
>gb|AAN08664.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1010
Score = 65.5 bits (158), Expect(2) = 3e-19
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
KL D YR +IGSLLYLT SRPDI F+V +CARFQ PKE H+ AVK
Sbjct: 430 KLVDLKLYRSMIGSLLYLTTSRPDIMFSVCMCARFQAAPKECHLVAVK 477
Score = 55.1 bits (131), Expect(2) = 3e-19
Identities = 22/77 (28%), Positives = 45/77 (58%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+++ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 353 EVFCKEFGDMISREFDMSLIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 412
Query: 211 VKIPINTN*KIEPGTEG 261
+K P+ TN + EG
Sbjct: 413 IKTPMATNGHLALDEEG 429
>emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]
Length = 900
Score = 66.6 bits (161), Expect(2) = 4e-19
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D + YRG+IGSLLYLT SRPDI ++V +CARFQ PKE+H+ AVK
Sbjct: 242 KFIDSTMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSAVK 289
Score = 53.5 bits (127), Expect(2) = 4e-19
Identities = 23/74 (31%), Positives = 46/74 (62%)
Frame = +1
Query: 46 KFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKIPI 225
KF + M S+ LGLQ+KQ EG +INQ+KY +D + ++ +++++T+K P+
Sbjct: 170 KFSNCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNMEAAKTMKTPM 229
Query: 226 NTN*KIEPGTEGSW 267
+++ K++ +G +
Sbjct: 230 SSSIKLDKDEKGKF 243
>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
Length = 455
Score = 65.9 bits (159), Expect(2) = 4e-19
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
KL + + YRG+IGSLLYLT SRPDI +++ +CARFQ PKE+H+ AVK
Sbjct: 231 KLINSTMYRGMIGSLLYLTASRPDIMYSICLCARFQSCPKESHLSAVK 278
Score = 54.3 bits (129), Expect(2) = 4e-19
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = +1
Query: 37 LCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVK 216
LC +F M S+ +GLQ+KQ EG +INQ+KY +D + ++ ++ ++T+K
Sbjct: 156 LCEEFSKCMHSEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIRDLLKRFNMEEAKTMK 215
Query: 217 IPINTN*KIEPGTEG 261
P++++ K++ +G
Sbjct: 216 TPMSSSIKLDMDXKG 230
>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2111
Score = 62.4 bits (150), Expect(2) = 5e-19
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYL SRPDI +V +CARFQ EPKE H+ AVK
Sbjct: 1339 KCVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQAEPKECHLIAVK 1386
Score = 57.4 bits (137), Expect(2) = 5e-19
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 40 CNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKI 219
C +F +MT + LGLQVKQ+ GI+I+Q+KY KD + K+G++ ++ +K
Sbjct: 1265 CEEFSSIMTKRFEMSMMGELTFFLGLQVKQALVGIFISQTKYVKDILKKFGMEDAKPIKT 1324
Query: 220 PINTN 234
P+ TN
Sbjct: 1325 PMPTN 1329
>gb|AEJ07943.1| Ji4 putative pol protein [Zea diploperennis]
Length = 1063
Score = 60.5 bits (145), Expect(2) = 5e-19
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYL SRPDI V +CARFQ +PKE+H+ AVK
Sbjct: 834 KSVDQKVYRSMIGSLLYLCASRPDIMLYVCMCARFQSDPKESHLTAVK 881
Score = 59.3 bits (142), Expect(2) = 5e-19
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +1
Query: 40 CNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKI 219
C +F +MT + LG QVKQ EG +I+Q+KYT+D +TK+G++ ++ +K
Sbjct: 760 CEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILTKFGMKDAKPIKT 819
Query: 220 PINTN*KIEPGTEG 261
P+ TN ++ T G
Sbjct: 820 PMGTNGHLDLDTGG 833
>ref|XP_004509513.1| PREDICTED: uncharacterized protein LOC101489680, partial [Cicer
arietinum]
Length = 1036
Score = 69.7 bits (169), Expect(2) = 5e-19
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K +YRG+IGSLLYLT SRPDI FAVG+CAR+Q PKE+H+ AVK
Sbjct: 256 KSVSEKEYRGMIGSLLYLTASRPDIMFAVGLCARYQSAPKESHLTAVK 303
Score = 50.1 bits (118), Expect(2) = 5e-19
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +1
Query: 37 LCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVK 216
LC F LM S+ LGLQ+KQ +GI++ Q KY KD + KY + S+ +
Sbjct: 181 LCEDFSKLMQSEFEMSMMGELRYFLGLQIKQYEKGIFVCQEKYIKDLLIKYKMNESKIMT 240
Query: 217 IPINTN*KIEPGTEG 261
P++ + +E G
Sbjct: 241 TPMHPSTSLEKDENG 255
>gb|ABG66113.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2112
Score = 63.5 bits (153), Expect(2) = 7e-19
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYLT SRPDI F+V +CARFQ PKE H+ AVK
Sbjct: 1356 KPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVK 1403
Score = 55.8 bits (133), Expect(2) = 7e-19
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+M+ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 1279 EVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 1338
Query: 211 VKIPINTN 234
+K P+ TN
Sbjct: 1339 IKTPMATN 1346
>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
Length = 1760
Score = 61.6 bits (148), Expect(2) = 7e-19
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYL SRPDI +V +CARFQ +PKE+H+ AVK
Sbjct: 1531 KSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVK 1578
Score = 57.8 bits (138), Expect(2) = 7e-19
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +1
Query: 40 CNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKI 219
C +F +MT + LG QVKQ EG +I+Q+KYT+D ++K+G++ ++ +K
Sbjct: 1457 CEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILSKFGMKDAKPIKT 1516
Query: 220 PINTN*KIEPGTEG 261
P+ TN ++ T G
Sbjct: 1517 PMGTNGHLDLDTGG 1530
>gb|AAM94552.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1584
Score = 63.5 bits (153), Expect(2) = 7e-19
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYLT SRPDI F+V +CARFQ PKE H+ AVK
Sbjct: 1356 KPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVK 1403
Score = 55.8 bits (133), Expect(2) = 7e-19
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+M+ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 1279 EVFCKEFGDMMSREFEMSMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 1338
Query: 211 VKIPINTN 234
+K P+ TN
Sbjct: 1339 IKTPMATN 1346
>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1411
Score = 63.5 bits (153), Expect(2) = 7e-19
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYLT SRPDI F+V +CARFQ PKE H+ AVK
Sbjct: 1183 KPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVK 1230
Score = 55.8 bits (133), Expect(2) = 7e-19
Identities = 21/68 (30%), Positives = 42/68 (61%)
Frame = +1
Query: 31 DILCNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRT 210
++ C +F D+M+ + LGLQ+KQ +G +++Q+KY KD + ++G++ ++
Sbjct: 1106 EVFCKEFGDMMSREFDMSMIGELSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKP 1165
Query: 211 VKIPINTN 234
+K P+ TN
Sbjct: 1166 IKTPMATN 1173
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 61.6 bits (148), Expect(2) = 7e-19
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 261 KLADPSKYRGIIGSLLYLTGSRPDIAFAVGVCARFQVEPKETHMQAVK 404
K D YR +IGSLLYL SRPDI +V +CARFQ +PKE+H+ AVK
Sbjct: 834 KSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVK 881
Score = 57.8 bits (138), Expect(2) = 7e-19
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +1
Query: 40 CNKFVDLMTSQXXXXXXXXXXXXLGLQVKQSAEGIYINQSKYTKDFITKYGVQSSRTVKI 219
C +F +MT + LG QVKQ EG +I Q+KYT+D +TK+G++ ++ +K
Sbjct: 760 CEEFSRIMTQKFEMSMMGELKYFLGFQVKQLQEGTFICQTKYTQDILTKFGMKDAKPIKT 819
Query: 220 PINTN*KIEPGTEG 261
P+ TN ++ T G
Sbjct: 820 PMGTNGHLDLDTGG 833